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Lag0031785 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031785
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPol protein
Genome locationchr11:14635393..14640673
RNA-Seq ExpressionLag0031785
SyntenyLag0031785
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043069.1 pol protein [Cucumis melo var. makuwa]4.2e-0645.16Show/hide
Query:  MLRKYVADTSHVIDFESLCLDEDMSYEEKPKQILARDMKTLYRPCSSSPPSHLAQPFP-----RPS-----FAAFQLLLLRFSVVVVEVLCFS
        MLRKYV+D SHV+D+E L +DE++SY E+P ++LAR+ +      SSS  S     FP     RPS       +  LLL R SV VVEV+ F+
Subjt:  MLRKYVADTSHVIDFESLCLDEDMSYEEKPKQILARDMKTLYRPCSSSPPSHLAQPFP-----RPS-----FAAFQLLLLRFSVVVVEVLCFS

KAA0046952.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]7.1e-0647.22Show/hide
Query:  MLRKYVADTSHVIDFESLCLDEDMSYEEKPKQILARDMKTLYRPCS--SSPPSHLAQPFPRPSFAAFQLLLL
        MLRKY+AD +HV+DFE L + E++SYEE+P +ILAR +K L    +  S PPS   +  P P     +L LL
Subjt:  MLRKYVADTSHVIDFESLCLDEDMSYEEKPKQILARDMKTLYRPCS--SSPPSHLAQPFPRPSFAAFQLLLL

XP_023522914.1 uncharacterized protein LOC111786965, partial [Cucurbita pepo subsp. pepo]5.5e-0670.73Show/hide
Query:  MLRKYVADTSHVIDFESLCLDEDMSYEEKPKQILARDMKTL
        MLRKY+ D  HVID+E L L+EDMSYEEKP +ILAR++KTL
Subjt:  MLRKYVADTSHVIDFESLCLDEDMSYEEKPKQILARDMKTL

XP_038884794.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120075457 [Benincasa hispida]3.2e-0670.73Show/hide
Query:  MLRKYVADTSHVIDFESLCLDEDMSYEEKPKQILARDMKTL
        MLRKYVAD+SHV+D+E L L+E++SYEEKP QILAR++K L
Subjt:  MLRKYVADTSHVIDFESLCLDEDMSYEEKPKQILARDMKTL

XP_038887191.1 uncharacterized protein LOC120077378 [Benincasa hispida]1.4e-0667.44Show/hide
Query:  MLRKYVADTSHVIDFESLCLDEDMSYEEKPKQILARDMKTLYR
        MLRKYVAD SHV++FE L L++++SYEEKP +ILAR++KTL+R
Subjt:  MLRKYVADTSHVIDFESLCLDEDMSYEEKPKQILARDMKTLYR

TrEMBL top hitse value%identityAlignment
A0A5A7T5B1 Pol protein5.9e-0665.85Show/hide
Query:  MLRKYVADTSHVIDFESLCLDEDMSYEEKPKQILARDMKTL
        MLR+YVAD +HV+DFE L ++ED+SYEEKP +ILAR++K L
Subjt:  MLRKYVADTSHVIDFESLCLDEDMSYEEKPKQILARDMKTL

A0A5A7TPB7 Pol protein2.0e-0645.16Show/hide
Query:  MLRKYVADTSHVIDFESLCLDEDMSYEEKPKQILARDMKTLYRPCSSSPPSHLAQPFP-----RPS-----FAAFQLLLLRFSVVVVEVLCFS
        MLRKYV+D SHV+D+E L +DE++SY E+P ++LAR+ +      SSS  S     FP     RPS       +  LLL R SV VVEV+ F+
Subjt:  MLRKYVADTSHVIDFESLCLDEDMSYEEKPKQILARDMKTLYRPCSSSPPSHLAQPFP-----RPS-----FAAFQLLLLRFSVVVVEVLCFS

A0A5A7TU21 DNA/RNA polymerases superfamily protein3.5e-0647.22Show/hide
Query:  MLRKYVADTSHVIDFESLCLDEDMSYEEKPKQILARDMKTLYRPCS--SSPPSHLAQPFPRPSFAAFQLLLL
        MLRKY+AD +HV+DFE L + E++SYEE+P +ILAR +K L    +  S PPS   +  P P     +L LL
Subjt:  MLRKYVADTSHVIDFESLCLDEDMSYEEKPKQILARDMKTLYRPCS--SSPPSHLAQPFPRPSFAAFQLLLL

A0A5A7U003 Pol protein4.5e-0665.85Show/hide
Query:  MLRKYVADTSHVIDFESLCLDEDMSYEEKPKQILARDMKTL
        MLRKYVAD++HV+DFE L +DE++SYEE+P +ILAR++K L
Subjt:  MLRKYVADTSHVIDFESLCLDEDMSYEEKPKQILARDMKTL

A0A5D3CY86 Retrotransposon protein, putative, Ty3-gypsy subclass3.5e-0646.58Show/hide
Query:  MLRKYVADTSHVIDFESLCLDEDMSYEEKPKQILARDMKTLYRPC------SSSPPSHLAQPFPRPSFAAFQL
        ML KYVAD +HV+DFE L ++E+M+YEE+P +ILAR++K L+RP       SSS  S   +  P  + A   L
Subjt:  MLRKYVADTSHVIDFESLCLDEDMSYEEKPKQILARDMKTLYRPC------SSSPPSHLAQPFPRPSFAAFQL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTACGAAAGTATGTGGCAGATACATCACATGTGATTGACTTCGAGTCGTTGTGCTTGGATGAGGATATGAGTTACGAGGAAAAGCCCAAGCAAATCTTGGCACGAGA
CATGAAGACACTCTATCGACCTTGTAGCAGTTCGCCGCCGTCACACCTTGCGCAACCATTCCCCAGACCGTCGTTCGCCGCGTTTCAGTTGCTGTTGTTGAGGTTTAGTG
TCGTCGTTGTCGAAGTCCTGTGTTTCAGCAGCTGCAAGTTTCCGTTCGTCATCTTGGGATTTTCGGCGATTCGGGTTTGCTGTCCAACGAGGTGGTTTGTCGGCTTGGGT
TCATTCTTGCTAAGTCGTGGCTTTGAAGCGCTGTCCAGAAAGTTTCAGGTAAGTGACCCTTCTACTGAAAAGCTTATGCTTGGTTGGGAACCGTGTGCTGATAGCATAAG
CTTTTTCTTGTGTGAACTCTTTTGCAAAAACAGAGGAGAAGCTGGAATTCCCCAGAAATGCGACCGCATTTCTGGGAAGGCAAAATTGAAATGCGACCGCATTTCTAGAA
AAATAGAGGTTGTTCCGAGTCGTGCGTGGGTCGTTGTTGACGAGTCTTCTTTGCACCTAACCGGTTGTTTTGACCCCGAAACTGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTACGAAAGTATGTGGCAGATACATCACATGTGATTGACTTCGAGTCGTTGTGCTTGGATGAGGATATGAGTTACGAGGAAAAGCCCAAGCAAATCTTGGCACGAGA
CATGAAGACACTCTATCGACCTTGTAGCAGTTCGCCGCCGTCACACCTTGCGCAACCATTCCCCAGACCGTCGTTCGCCGCGTTTCAGTTGCTGTTGTTGAGGTTTAGTG
TCGTCGTTGTCGAAGTCCTGTGTTTCAGCAGCTGCAAGTTTCCGTTCGTCATCTTGGGATTTTCGGCGATTCGGGTTTGCTGTCCAACGAGGTGGTTTGTCGGCTTGGGT
TCATTCTTGCTAAGTCGTGGCTTTGAAGCGCTGTCCAGAAAGTTTCAGGTAAGTGACCCTTCTACTGAAAAGCTTATGCTTGGTTGGGAACCGTGTGCTGATAGCATAAG
CTTTTTCTTGTGTGAACTCTTTTGCAAAAACAGAGGAGAAGCTGGAATTCCCCAGAAATGCGACCGCATTTCTGGGAAGGCAAAATTGAAATGCGACCGCATTTCTAGAA
AAATAGAGGTTGTTCCGAGTCGTGCGTGGGTCGTTGTTGACGAGTCTTCTTTGCACCTAACCGGTTGTTTTGACCCCGAAACTGACTGA
Protein sequenceShow/hide protein sequence
MLRKYVADTSHVIDFESLCLDEDMSYEEKPKQILARDMKTLYRPCSSSPPSHLAQPFPRPSFAAFQLLLLRFSVVVVEVLCFSSCKFPFVILGFSAIRVCCPTRWFVGLG
SFLLSRGFEALSRKFQVSDPSTEKLMLGWEPCADSISFFLCELFCKNRGEAGIPQKCDRISGKAKLKCDRISRKIEVVPSRAWVVVDESSLHLTGCFDPETD