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Lag0031791 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031791
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr11:14853163..14853504
RNA-Seq ExpressionLag0031791
SyntenyLag0031791
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]1.3e-2250.91Show/hide
Query:  DFHGVSDAIRCRAFFFTLTGSARHWFERLIRRSISCFKELAQAFLAQFMGAKEQHKPRINLLTVKQQPGESLRDYITCFNDEALQVEGYDEGAALVAITA
        D +G+++AIRCR F FTLTGS R WF++L R+SIS FKELA+AF+ QF G   + +P   LLT+KQ+  ESL+DY+  FN E LQVEG  +   L+   +
Subjt:  DFHGVSDAIRCRAFFFTLTGSARHWFERLIRRSISCFKELAQAFLAQFMGAKEQHKPRINLLTVKQQPGESLRDYITCFNDEALQVEGYDEGAALVAITA

Query:  KLEDERLLNS
         ++DE+L+ S
Subjt:  KLEDERLLNS

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]6.5e-2250.93Show/hide
Query:  MDFHGVSDAIRCRAFFFTLTGSARHWFERLIRRSISCFKELAQAFLAQFMGAKEQHKPRINLLTVKQQPGESLRDYITCFNDEALQVEGYDEGAALVAIT
        MD +GVS+A++CR F  TL+GSAR WF +L R SIS FK LA+AF+ QF+G + + +P   LLT+KQ+  ESL DY+  FN+E LQVEG     +L+A  
Subjt:  MDFHGVSDAIRCRAFFFTLTGSARHWFERLIRRSISCFKELAQAFLAQFMGAKEQHKPRINLLTVKQQPGESLRDYITCFNDEALQVEGYDEGAALVAIT

Query:  AKLEDERL
        + + DE L
Subjt:  AKLEDERL

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]1.1e-2453.64Show/hide
Query:  DFHGVSDAIRCRAFFFTLTGSARHWFERLIRRSISCFKELAQAFLAQFMGAKEQHKPRINLLTVKQQPGESLRDYITCFNDEALQVEGYDEGAALVAITA
        D + + +AIRCR F FTLTGSAR+WF +L R SIS FKELA+AF+ QF+G + + KP   LLT+KQ+  ESL++Y+  FN+E LQVEG  +  AL+A  +
Subjt:  DFHGVSDAIRCRAFFFTLTGSARHWFERLIRRSISCFKELAQAFLAQFMGAKEQHKPRINLLTVKQQPGESLRDYITCFNDEALQVEGYDEGAALVAITA

Query:  KLEDERLLNS
         ++DERL+ S
Subjt:  KLEDERLLNS

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]2.9e-2252.78Show/hide
Query:  MDFHGVSDAIRCRAFFFTLTGSARHWFERLIRRSISCFKELAQAFLAQFMGAKEQHKPRINLLTVKQQPGESLRDYITCFNDEALQVEGYDEGAALVAIT
        MD +GVS+A+RCR F  TL GSAR WF +L R SIS FK LA+AF+ QF+G + + +P   LLT+KQ+  ESLRDY+  FN+E LQVEG  +  +L+A  
Subjt:  MDFHGVSDAIRCRAFFFTLTGSARHWFERLIRRSISCFKELAQAFLAQFMGAKEQHKPRINLLTVKQQPGESLRDYITCFNDEALQVEGYDEGAALVAIT

Query:  AKLEDERL
        + + DE L
Subjt:  AKLEDERL

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]2.9e-2252.78Show/hide
Query:  MDFHGVSDAIRCRAFFFTLTGSARHWFERLIRRSISCFKELAQAFLAQFMGAKEQHKPRINLLTVKQQPGESLRDYITCFNDEALQVEGYDEGAALVAIT
        MD +GVSDAIRCR F  TL GSAR WF +L R SIS FK LA+AF+ QF+G + + +P   LLT+KQ+  ESL DY+  FN+E LQ+EG  +  +L+A  
Subjt:  MDFHGVSDAIRCRAFFFTLTGSARHWFERLIRRSISCFKELAQAFLAQFMGAKEQHKPRINLLTVKQQPGESLRDYITCFNDEALQVEGYDEGAALVAIT

Query:  AKLEDERL
        + + DE L
Subjt:  AKLEDERL

TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166196.3e-2350.91Show/hide
Query:  DFHGVSDAIRCRAFFFTLTGSARHWFERLIRRSISCFKELAQAFLAQFMGAKEQHKPRINLLTVKQQPGESLRDYITCFNDEALQVEGYDEGAALVAITA
        D +G+++AIRCR F FTLTGS R WF++L R+SIS FKELA+AF+ QF G   + +P   LLT+KQ+  ESL+DY+  FN E LQVEG  +   L+   +
Subjt:  DFHGVSDAIRCRAFFFTLTGSARHWFERLIRRSISCFKELAQAFLAQFMGAKEQHKPRINLLTVKQQPGESLRDYITCFNDEALQVEGYDEGAALVAITA

Query:  KLEDERLLNS
         ++DE+L+ S
Subjt:  KLEDERLLNS

A0A6J1D7D2 uncharacterized protein LOC1110183073.1e-2250.93Show/hide
Query:  MDFHGVSDAIRCRAFFFTLTGSARHWFERLIRRSISCFKELAQAFLAQFMGAKEQHKPRINLLTVKQQPGESLRDYITCFNDEALQVEGYDEGAALVAIT
        MD +GVS+A++CR F  TL+GSAR WF +L R SIS FK LA+AF+ QF+G + + +P   LLT+KQ+  ESL DY+  FN+E LQVEG     +L+A  
Subjt:  MDFHGVSDAIRCRAFFFTLTGSARHWFERLIRRSISCFKELAQAFLAQFMGAKEQHKPRINLLTVKQQPGESLRDYITCFNDEALQVEGYDEGAALVAIT

Query:  AKLEDERL
        + + DE L
Subjt:  AKLEDERL

A0A6J1DWY0 uncharacterized protein LOC1110252931.4e-2252.78Show/hide
Query:  MDFHGVSDAIRCRAFFFTLTGSARHWFERLIRRSISCFKELAQAFLAQFMGAKEQHKPRINLLTVKQQPGESLRDYITCFNDEALQVEGYDEGAALVAIT
        MD +GVS+A+RCR F  TL GSAR WF +L R SIS FK LA+AF+ QF+G + + +P   LLT+KQ+  ESLRDY+  FN+E LQVEG  +  +L+A  
Subjt:  MDFHGVSDAIRCRAFFFTLTGSARHWFERLIRRSISCFKELAQAFLAQFMGAKEQHKPRINLLTVKQQPGESLRDYITCFNDEALQVEGYDEGAALVAIT

Query:  AKLEDERL
        + + DE L
Subjt:  AKLEDERL

A0A6J1DZ49 uncharacterized protein LOC1110248515.2e-2553.64Show/hide
Query:  DFHGVSDAIRCRAFFFTLTGSARHWFERLIRRSISCFKELAQAFLAQFMGAKEQHKPRINLLTVKQQPGESLRDYITCFNDEALQVEGYDEGAALVAITA
        D + + +AIRCR F FTLTGSAR+WF +L R SIS FKELA+AF+ QF+G + + KP   LLT+KQ+  ESL++Y+  FN+E LQVEG  +  AL+A  +
Subjt:  DFHGVSDAIRCRAFFFTLTGSARHWFERLIRRSISCFKELAQAFLAQFMGAKEQHKPRINLLTVKQQPGESLRDYITCFNDEALQVEGYDEGAALVAITA

Query:  KLEDERLLNS
         ++DERL+ S
Subjt:  KLEDERLLNS

A0A6J1E1E7 uncharacterized protein LOC1110255481.4e-2252.78Show/hide
Query:  MDFHGVSDAIRCRAFFFTLTGSARHWFERLIRRSISCFKELAQAFLAQFMGAKEQHKPRINLLTVKQQPGESLRDYITCFNDEALQVEGYDEGAALVAIT
        MD +GVSDAIRCR F  TL GSAR WF +L R SIS FK LA+AF+ QF+G + + +P   LLT+KQ+  ESL DY+  FN+E LQ+EG  +  +L+A  
Subjt:  MDFHGVSDAIRCRAFFFTLTGSARHWFERLIRRSISCFKELAQAFLAQFMGAKEQHKPRINLLTVKQQPGESLRDYITCFNDEALQVEGYDEGAALVAIT

Query:  AKLEDERL
        + + DE L
Subjt:  AKLEDERL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTTCCACGGTGTCTCAGATGCAATCAGGTGCCGCGCATTCTTTTTCACTCTGACAGGATCAGCCAGGCACTGGTTTGAGAGGCTGATAAGGAGATCCATCAGCTG
TTTCAAGGAGTTGGCCCAAGCATTCCTTGCACAGTTCATGGGAGCCAAAGAACAGCACAAGCCTCGCATCAACCTCTTGACAGTCAAACAGCAGCCAGGTGAGAGCTTGC
GTGATTACATAACGTGTTTTAATGACGAAGCACTACAGGTTGAGGGGTACGACGAGGGAGCAGCCCTGGTAGCCATAACAGCCAAATTGGAAGACGAAAGACTGCTCAAT
TCAATAAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACTTCCACGGTGTCTCAGATGCAATCAGGTGCCGCGCATTCTTTTTCACTCTGACAGGATCAGCCAGGCACTGGTTTGAGAGGCTGATAAGGAGATCCATCAGCTG
TTTCAAGGAGTTGGCCCAAGCATTCCTTGCACAGTTCATGGGAGCCAAAGAACAGCACAAGCCTCGCATCAACCTCTTGACAGTCAAACAGCAGCCAGGTGAGAGCTTGC
GTGATTACATAACGTGTTTTAATGACGAAGCACTACAGGTTGAGGGGTACGACGAGGGAGCAGCCCTGGTAGCCATAACAGCCAAATTGGAAGACGAAAGACTGCTCAAT
TCAATAAGTTAG
Protein sequenceShow/hide protein sequence
MDFHGVSDAIRCRAFFFTLTGSARHWFERLIRRSISCFKELAQAFLAQFMGAKEQHKPRINLLTVKQQPGESLRDYITCFNDEALQVEGYDEGAALVAITAKLEDERLLN
SIS