; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0031792 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031792
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr11:14855447..14856237
RNA-Seq ExpressionLag0031792
SyntenyLag0031792
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
WP_217833153.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]2.2e-5558.82Show/hide
Query:  DKARDWLRSLPSGSITTLDALVQTFLTKYFPPAKTVKLRTKIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAVGGT
        D+A+DWL ++P  SITT + L Q FL KYFPPAK+ +LRT+IGTF+QL DEQL+EAWERYK+LLR+CPQHGYPDWLQIQLFYNGL  +TK+I+DA  GG+
Subjt:  DKARDWLRSLPSGSITTLDALVQTFLTKYFPPAKTVKLRTKIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAVGGT

Query:  LLSKTVEIARTLLEDMATNSYQWPTERSAPK-KIAAGIYEIDNVSFLQAQMTSLANAFLKFSGTGSAQS--IESAALASQCQEEALH
        + SK  + A T+LED+AT SY WP ER++P    AAG+YE+D V+ L+AQM SL NA  K +  G AQ+     A+LA+   E  +H
Subjt:  LLSKTVEIARTLLEDMATNSYQWPTERSAPK-KIAAGIYEIDNVSFLQAQMTSLANAFLKFSGTGSAQS--IESAALASQCQEEALH

XP_015387963.1 uncharacterized protein LOC107177920 [Citrus sinensis]2.0e-4861.94Show/hide
Query:  DKARDWLRSLPSGSITTLDALVQTFLTKYFPPAKTVKLRTKIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAVGGT
        DKA++WL SL +G+ITT D L Q FL KYFPPAKT KLR  I TF Q G E L+EAWERYK+LLRKCP HG P WLQ+Q FYNGL  NT+T++DAA GGT
Subjt:  DKARDWLRSLPSGSITTLDALVQTFLTKYFPPAKTVKLRTKIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAVGGT

Query:  LLSKTVEIARTLLEDMATNSYQWPTERSAPKKIAAGIYEIDNVSFLQAQMTSLAN
        L+ KT E A  LLE+MA+N+YQW ++RS P+KI  G + +D V+ L  QMT+L+N
Subjt:  LLSKTVEIARTLLEDMATNSYQWPTERSAPKKIAAGIYEIDNVSFLQAQMTSLAN

XP_022843226.1 uncharacterized protein LOC111366761 [Olea europaea var. sylvestris]3.7e-5054.14Show/hide
Query:  DKARDWLRSLPSGSITTLDALVQTFLTKYFPPAKTVKLRTKIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAVGGT
        DKA+ W +SLP GSITT D L Q FLTKYFPP+K+ +LR +I  F+QL  E  +EAWER+K+LLR+CPQHG+  W+QI++FYNGLN  T+T+VDAA GG 
Subjt:  DKARDWLRSLPSGSITTLDALVQTFLTKYFPPAKTVKLRTKIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAVGGT

Query:  LLSKTVEIARTLLEDMATNSYQWPTERSAPKKIAAGIYEIDNVSFLQAQMTSLANAFLKFSGTGSAQSIESAALASQCQEE
        L++KT E A  LL+D+ATNSYQWP+ERS  KK+ AG++E+D ++ L AQ+ SL N  +  +  G+ Q+++S    S   +E
Subjt:  LLSKTVEIARTLLEDMATNSYQWPTERSAPKKIAAGIYEIDNVSFLQAQMTSLANAFLKFSGTGSAQSIESAALASQCQEE

XP_022860306.1 uncharacterized protein LOC111380876 [Olea europaea var. sylvestris]4.9e-5054.14Show/hide
Query:  DKARDWLRSLPSGSITTLDALVQTFLTKYFPPAKTVKLRTKIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAVGGT
        DKA+ W +SLP GSITT D L Q FLTKYFPP+K+ +L ++I  F+QL  E  +EAWER+K+LLR+CPQHG+  W+QI++FYNGLN  T+T+VDAA GG 
Subjt:  DKARDWLRSLPSGSITTLDALVQTFLTKYFPPAKTVKLRTKIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAVGGT

Query:  LLSKTVEIARTLLEDMATNSYQWPTERSAPKKIAAGIYEIDNVSFLQAQMTSLANAFLKFSGTGSAQSIESAALASQCQEE
        L++KT E A  LL+D+ATNSYQWP+ERS  KK+ AG +E+D ++ L AQ+ SL N  +  +  G+ Q ++S   AS   +E
Subjt:  LLSKTVEIARTLLEDMATNSYQWPTERSAPKKIAAGIYEIDNVSFLQAQMTSLANAFLKFSGTGSAQSIESAALASQCQEE

XP_023903214.1 uncharacterized protein LOC112015077 [Quercus suber]1.6e-4857.39Show/hide
Query:  DKARDWLRSLPSGSITTLDALVQTFLTKYFPPAKTVKLRTKIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAVGGT
        DKAR WL+SL  GSIT+   + + FL K+FPPAKT +LR++IG F+Q   E L+EAWERYK+L+R CPQHG PDWLQ+Q+FYNGLN  T+TIVDAA GGT
Subjt:  DKARDWLRSLPSGSITTLDALVQTFLTKYFPPAKTVKLRTKIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAVGGT

Query:  LLSKTVEIARTLLEDMATNSYQWPTERSAPKKIAAGIYEIDNVSFLQAQMTSLANAFLKFSGTGSAQSIESAALAS
        L+SKT E A +LLE+MA+N+YQWPTER+  KK+ AGI+E++  + L AQ+ SL++     S     QS E  A +S
Subjt:  LLSKTVEIARTLLEDMATNSYQWPTERSAPKKIAAGIYEIDNVSFLQAQMTSLANAFLKFSGTGSAQSIESAALAS

TrEMBL top hitse value%identityAlignment
A0A2I4G4Q3 uncharacterized protein LOC1090047124.0e-4250.57Show/hide
Query:  DKARDWLRSLPSGSITTLDALVQTFLTKYFPPAKTVKLRTKIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAVGGT
        D+AR WL+SL   SIT+   + + F  K+FPPAKT +LR++IG F+Q   E L+EAWE YK+L+R+CPQHG PDWLQ+Q+FYNGLN +T+TIVD   GGT
Subjt:  DKARDWLRSLPSGSITTLDALVQTFLTKYFPPAKTVKLRTKIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAVGGT

Query:  LLSKTVEIARTLLEDMATNSYQWPTERSAPKKIAAGIYEIDNVSFLQAQMTSLANAFLKFSGTGSAQSIESAALAS
        L+ KT+E A  LLE+MA+N+YQWP ER+  KK+A  I+E++ ++ L AQ+ +L++     +     QS E     S
Subjt:  LLSKTVEIARTLLEDMATNSYQWPTERSAPKKIAAGIYEIDNVSFLQAQMTSLANAFLKFSGTGSAQSIESAALAS

A0A3S3N117 Retrotrans_gag domain-containing protein1.6e-4357.14Show/hide
Query:  DKARDWLRSLPSGSITTLDALVQTFLTKYFPPAKTVKLRTKIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAVGGT
        DKA+ WL SLP  +ITT D L + FL K+FPP KTVK+R  I TF Q   E L+EAWERYKELLRKCP HG P W+Q+Q FYNGL   T+T +DAA GGT
Subjt:  DKARDWLRSLPSGSITTLDALVQTFLTKYFPPAKTVKLRTKIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAVGGT

Query:  LLSKTVEIARTLLEDMATNSYQWPTERSAPKKIAAGIYEIDNVSFLQAQMTSLA
        L+ K+ E A  L+E+MATN+YQWP++    KKI  G++E+D++S L AQ+ +L+
Subjt:  LLSKTVEIARTLLEDMATNSYQWPTERSAPKKIAAGIYEIDNVSFLQAQMTSLA

A0A6J0ZX64 LOW QUALITY PROTEIN: uncharacterized protein LOC1104129458.6e-4551.89Show/hide
Query:  DKARDWLRSLPSGSITTLDALVQTFLTKYFPPAKTVKLRTKIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAVGGT
        DKA+ WL SLP+GSITT + L Q FL K+FPPAKT K+R  I +F Q   E L+EAWER+KELLR+CP HG PDWLQ+Q FYNGL  + KTI+DAA GG 
Subjt:  DKARDWLRSLPSGSITTLDALVQTFLTKYFPPAKTVKLRTKIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAVGGT

Query:  LLSKTVEIARTLLEDMATNSYQWPTERSAPKKIAAGIYEIDNVSFLQAQMTSLANAFLKFSGTGSAQSIESAALASQCQEEALHD
        L+SK    A  LLE+MA+N+YQWP+ERS  +K A G YEID +  L  Q+ +L+    K    G      S  +   C +   +D
Subjt:  LLSKTVEIARTLLEDMATNSYQWPTERSAPKKIAAGIYEIDNVSFLQAQMTSLANAFLKFSGTGSAQSIESAALASQCQEEALHD

A0A6J0ZYV0 uncharacterized protein LOC1104134138.6e-4551.89Show/hide
Query:  DKARDWLRSLPSGSITTLDALVQTFLTKYFPPAKTVKLRTKIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAVGGT
        DKA+ WL SLP+GSITT + L Q FL K+FPPAKT K+R  I +F Q   E L+EAWER+KELLR+CP HG PDWLQ+Q FYNGL  + KTI+DAA GG 
Subjt:  DKARDWLRSLPSGSITTLDALVQTFLTKYFPPAKTVKLRTKIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAVGGT

Query:  LLSKTVEIARTLLEDMATNSYQWPTERSAPKKIAAGIYEIDNVSFLQAQMTSLANAFLKFSGTGSAQSIESAALASQCQEEALHD
        L+SK    A  LLE+MA+N+YQWP+ERS  +K A G YEID +  L  Q+ +L+    K    G      S  +   C +   +D
Subjt:  LLSKTVEIARTLLEDMATNSYQWPTERSAPKKIAAGIYEIDNVSFLQAQMTSLANAFLKFSGTGSAQSIESAALASQCQEEALHD

A0A6J1DU19 uncharacterized protein LOC1110243614.6e-4663.4Show/hide
Query:  LVQTFLTKYFPPAKTVKLRTKIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAVGGTLLSKTVEIARTLLEDMATNS
        +VQ FLT +FPPAKT +LRT+I +F++   EQLFE WERYKELLRKCPQHG  +WLQIQ+FYNGLN  T+TI+DAA GGTLLS+T E A  LL+DMA NS
Subjt:  LVQTFLTKYFPPAKTVKLRTKIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAVGGTLLSKTVEIARTLLEDMATNS

Query:  YQWPTERSAPKKIAAGIYEIDNVSFLQAQMTSLANAFLKFSGTGSAQSIESAA
        +QWP+ERS  KK+ AG+YEID +S L+AQ+ +L NA  K SG G++ S E  A
Subjt:  YQWPTERSAPKKIAAGIYEIDNVSFLQAQMTSLANAFLKFSGTGSAQSIESAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAATAATTTCGAGCTCAAAACTGGCCTCATCCAAATGGCTAGAGATAGACAAGGCTAGAGACTGGCTCAGATCACTTCCATCTGGAAGCATCACTACGTTGGACGC
ATTGGTTCAGACTTTTCTTACCAAATATTTCCCACCTGCAAAGACAGTCAAGCTGAGGACAAAGATTGGGACATTCCAGCAGCTAGGAGATGAACAGTTATTTGAGGCTT
GGGAACGCTATAAGGAGTTACTGAGGAAGTGTCCTCAGCATGGATACCCAGACTGGTTGCAGATCCAGTTGTTTTACAATGGTCTAAATCCAAATACTAAAACCATTGTT
GATGCAGCTGTAGGTGGGACTCTGTTGTCCAAGACCGTAGAGATTGCACGAACTTTACTTGAGGATATGGCCACGAATAGCTACCAGTGGCCAACTGAGCGGTCTGCACC
TAAGAAGATTGCAGCTGGGATTTATGAAATTGACAATGTAAGTTTTCTTCAAGCCCAGATGACCTCCCTTGCAAATGCTTTCTTGAAATTTTCAGGTACAGGGAGTGCAC
AATCTATTGAGTCGGCTGCTCTTGCATCTCAGTGTCAGGAGGAGGCCTTACACGACCCGCCCCAGATTATCCTAACCAACCTAGGACGTGACGTGTCGACAATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAATAATTTCGAGCTCAAAACTGGCCTCATCCAAATGGCTAGAGATAGACAAGGCTAGAGACTGGCTCAGATCACTTCCATCTGGAAGCATCACTACGTTGGACGC
ATTGGTTCAGACTTTTCTTACCAAATATTTCCCACCTGCAAAGACAGTCAAGCTGAGGACAAAGATTGGGACATTCCAGCAGCTAGGAGATGAACAGTTATTTGAGGCTT
GGGAACGCTATAAGGAGTTACTGAGGAAGTGTCCTCAGCATGGATACCCAGACTGGTTGCAGATCCAGTTGTTTTACAATGGTCTAAATCCAAATACTAAAACCATTGTT
GATGCAGCTGTAGGTGGGACTCTGTTGTCCAAGACCGTAGAGATTGCACGAACTTTACTTGAGGATATGGCCACGAATAGCTACCAGTGGCCAACTGAGCGGTCTGCACC
TAAGAAGATTGCAGCTGGGATTTATGAAATTGACAATGTAAGTTTTCTTCAAGCCCAGATGACCTCCCTTGCAAATGCTTTCTTGAAATTTTCAGGTACAGGGAGTGCAC
AATCTATTGAGTCGGCTGCTCTTGCATCTCAGTGTCAGGAGGAGGCCTTACACGACCCGCCCCAGATTATCCTAACCAACCTAGGACGTGACGTGTCGACAATGTAA
Protein sequenceShow/hide protein sequence
MQIISSSKLASSKWLEIDKARDWLRSLPSGSITTLDALVQTFLTKYFPPAKTVKLRTKIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIV
DAAVGGTLLSKTVEIARTLLEDMATNSYQWPTERSAPKKIAAGIYEIDNVSFLQAQMTSLANAFLKFSGTGSAQSIESAALASQCQEEALHDPPQIILTNLGRDVSTM