; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0031807 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031807
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationchr11:15119374..15120201
RNA-Seq ExpressionLag0031807
SyntenyLag0031807
Gene Ontology termsNA
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048296.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.0e-8367.09Show/hide
Query:  GESFHDPFLYRSIVGALQYVTMTRPEISYSVNKVCQFMHSPKDIHW--------------------KPSRNLSLVGFADADWASDPDDRKSTTGFCVFFG
        GE FHD  LYRSIVGALQY T+T PEISYSVNK CQFMH+PK  HW                    + S N+SLVGFADADWASDPDDRKST+GF V+FG
Subjt:  GESFHDPFLYRSIVGALQYVTMTRPEISYSVNKVCQFMHSPKDIHW--------------------KPSRNLSLVGFADADWASDPDDRKSTTGFCVFFG

Query:  NNLITWGSKKQGIISRSSTEAEYRSLATIAAELIWLKSLFSDLRICLPKPPIVWCDNLGAVHLSANPVMHSKTKHVELDIYFVRDLVLQRKLLIQRLPAH
        NNL++WGSKK  IISRSSTEAEYR LA +A EL+W++SL +DL I LP PPI+WCDNL AVHLSANP++HSKTKHVELDIYFVRDL+ + KL ++ LPA 
Subjt:  NNLITWGSKKQGIISRSSTEAEYRSLATIAAELIWLKSLFSDLRICLPKPPIVWCDNLGAVHLSANPVMHSKTKHVELDIYFVRDLVLQRKLLIQRLPAH

Query:  EQIADILTKPLSTATFDQLKFKLNVREATAIGLR
        EQIADILTKPLS  +F  LK KL V ++TAIGL+
Subjt:  EQIADILTKPLSTATFDQLKFKLNVREATAIGLR

KAA0052371.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.7e-9163.04Show/hide
Query:  MFLCQSTYIAEVLNRASMVDARSISTPMVSGSIPSAHQGESFHDPFLYRSIVGALQYVTMTRPEISYSVNKVCQFMHSPKDIHWK---------------
        +FL QS YI ++L R  M+DA+ ISTPMVSG + SA QGE FHD  L RS+VGALQY T+T PEISYSVNK CQFMH+PK  HW+               
Subjt:  MFLCQSTYIAEVLNRASMVDARSISTPMVSGSIPSAHQGESFHDPFLYRSIVGALQYVTMTRPEISYSVNKVCQFMHSPKDIHWK---------------

Query:  -----PSRNLSLVGFADADWASDPDDRKSTTGFCVFFGNNLITWGSKKQGIISRSSTEAEYRSLATIAAELIWLKSLFSDLRICLPKPPIVWCDNLGAVH
              S N SLVGFADADWASDPDDRKST+G CV+FGNNL++WGSKKQ IISRSSTEAEYR LA +A E++W++SL +DL I LP PPI+ CDNL AVH
Subjt:  -----PSRNLSLVGFADADWASDPDDRKSTTGFCVFFGNNLITWGSKKQGIISRSSTEAEYRSLATIAAELIWLKSLFSDLRICLPKPPIVWCDNLGAVH

Query:  LSANPVMHSKTKHVELDIYFVRDLVLQRKLLIQRLPAHEQIADILTKPLSTATFDQLKFKLNVREATAIGLR-VLR
         SANP++HSKTKHVELDIYFVRDL+ + KL ++ LPA EQIADILTKPLS  +F +LK  + V ++  IGL+ VLR
Subjt:  LSANPVMHSKTKHVELDIYFVRDLVLQRKLLIQRLPAHEQIADILTKPLSTATFDQLKFKLNVREATAIGLR-VLR

KAA0063213.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.7e-8463.32Show/hide
Query:  MVDARSISTPMVSGSIPSAHQGESFHDPFLYRSIVGALQYVTMTRPEISYSVNKVCQFMHSPKDIHWK--------------------PSRNLSLVGFAD
        M+DA+ IST MVSG + SA QGE FHD  LYRSIVGALQY T+T PEISYSVNK CQF+H+PK  HW+                     S N+SL GF D
Subjt:  MVDARSISTPMVSGSIPSAHQGESFHDPFLYRSIVGALQYVTMTRPEISYSVNKVCQFMHSPKDIHWK--------------------PSRNLSLVGFAD

Query:  ADWASDPDDRKSTTGFCVFFGNNLITWGSKKQGIISRSSTEAEYRSLATIAAELIWLKSLFSDLRICLPKPPIVWCDNLGAVHLSANPVMHSKTKHVELD
        ADWASDPDDRKST+GFCV+FGNNL++WGSKKQ II RSST+AEYR L  +A EL+W++SL +DL I LP PPI+WCDNL AVHLSAN ++HS TKHVELD
Subjt:  ADWASDPDDRKSTTGFCVFFGNNLITWGSKKQGIISRSSTEAEYRSLATIAAELIWLKSLFSDLRICLPKPPIVWCDNLGAVHLSANPVMHSKTKHVELD

Query:  IYFVRDLVLQRKLLIQRLPAHEQIADILTKPLSTATFDQLKFKLNVREATAIGLR-VLR
        IYFVRDL+ + KL I+ L A EQIADILTKPLS  +  +LK KL V ++ +IGL+ VLR
Subjt:  IYFVRDLVLQRKLLIQRLPAHEQIADILTKPLSTATFDQLKFKLNVREATAIGLR-VLR

XP_016902754.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]7.6e-7957.72Show/hide
Query:  MFLCQSTYIAEVLNRASMVDARSISTPMVSGSIPSAHQGESFHDPFLYRSIVGALQYVTMTRPEISYSVNKVCQFMHSPKDIHW----------------
        +FL QS YI ++L R  M++A+ ISTPM                            Y T+T PEISYSVNK CQFMH+PK  HW                
Subjt:  MFLCQSTYIAEVLNRASMVDARSISTPMVSGSIPSAHQGESFHDPFLYRSIVGALQYVTMTRPEISYSVNKVCQFMHSPKDIHW----------------

Query:  ----KPSRNLSLVGFADADWASDPDDRKSTTGFCVFFGNNLITWGSKKQGIISRSSTEAEYRSLATIAAELIWLKSLFSDLRICLPKPPIVWCDNLGAVH
            + S N+SLVGFADADWASDPDDRKST+GF V+FGNNL++WGSKK  IISRSSTEAEYR LA +A EL+W++SL +DL I LP PPI+WCDNL AVH
Subjt:  ----KPSRNLSLVGFADADWASDPDDRKSTTGFCVFFGNNLITWGSKKQGIISRSSTEAEYRSLATIAAELIWLKSLFSDLRICLPKPPIVWCDNLGAVH

Query:  LSANPVMHSKTKHVELDIYFVRDLVLQRKLLIQRLPAHEQIADILTKPLSTATFDQLKFKLNVREATAIGLR
        LSANP++HSKTKHVELDIYFVRDL+ + KL ++ LPA EQIADILTKPLS  +F  LK KL V ++TAIGL+
Subjt:  LSANPVMHSKTKHVELDIYFVRDLVLQRKLLIQRLPAHEQIADILTKPLSTATFDQLKFKLNVREATAIGLR

XP_016903397.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]6.2e-8962.32Show/hide
Query:  MFLCQSTYIAEVLNRASMVDARSISTPMVSGSIPSAHQGESFHDPFLYRSIVGALQYVTMTRPEISYSVNKVCQFMHSPKDIHWK---------------
        +FL QS YI ++L R  M+DA+ IST MVSG + SA QGE FHD  LYRSIVGALQY T+T PEISYSVNK CQF+H+PK  HW+               
Subjt:  MFLCQSTYIAEVLNRASMVDARSISTPMVSGSIPSAHQGESFHDPFLYRSIVGALQYVTMTRPEISYSVNKVCQFMHSPKDIHWK---------------

Query:  -----PSRNLSLVGFADADWASDPDDRKSTTGFCVFFGNNLITWGSKKQGIISRSSTEAEYRSLATIAAELIWLKSLFSDLRICLPKPPIVWCDNLGAVH
              S N+SL GF DADWASDPDDRKST+GFCV+FGNNL++WGSKKQ II RSST+AEYR L  +A EL+W++SL +DL I LP PPI+WCDNL AVH
Subjt:  -----PSRNLSLVGFADADWASDPDDRKSTTGFCVFFGNNLITWGSKKQGIISRSSTEAEYRSLATIAAELIWLKSLFSDLRICLPKPPIVWCDNLGAVH

Query:  LSANPVMHSKTKHVELDIYFVRDLVLQRKLLIQRLPAHEQIADILTKPLSTATFDQLKFKLNVREATAIGLR-VLR
        LSAN ++HS TKHVELDIYFVRDL+ + KL I+ L A EQIADILTKPLS  +  +LK KL V ++ +IGL+ VLR
Subjt:  LSANPVMHSKTKHVELDIYFVRDLVLQRKLLIQRLPAHEQIADILTKPLSTATFDQLKFKLNVREATAIGLR-VLR

TrEMBL top hitse value%identityAlignment
A0A1S4E3F1 uncharacterized mitochondrial protein AtMg00810-like3.7e-7957.72Show/hide
Query:  MFLCQSTYIAEVLNRASMVDARSISTPMVSGSIPSAHQGESFHDPFLYRSIVGALQYVTMTRPEISYSVNKVCQFMHSPKDIHW----------------
        +FL QS YI ++L R  M++A+ ISTPM                            Y T+T PEISYSVNK CQFMH+PK  HW                
Subjt:  MFLCQSTYIAEVLNRASMVDARSISTPMVSGSIPSAHQGESFHDPFLYRSIVGALQYVTMTRPEISYSVNKVCQFMHSPKDIHW----------------

Query:  ----KPSRNLSLVGFADADWASDPDDRKSTTGFCVFFGNNLITWGSKKQGIISRSSTEAEYRSLATIAAELIWLKSLFSDLRICLPKPPIVWCDNLGAVH
            + S N+SLVGFADADWASDPDDRKST+GF V+FGNNL++WGSKK  IISRSSTEAEYR LA +A EL+W++SL +DL I LP PPI+WCDNL AVH
Subjt:  ----KPSRNLSLVGFADADWASDPDDRKSTTGFCVFFGNNLITWGSKKQGIISRSSTEAEYRSLATIAAELIWLKSLFSDLRICLPKPPIVWCDNLGAVH

Query:  LSANPVMHSKTKHVELDIYFVRDLVLQRKLLIQRLPAHEQIADILTKPLSTATFDQLKFKLNVREATAIGLR
        LSANP++HSKTKHVELDIYFVRDL+ + KL ++ LPA EQIADILTKPLS  +F  LK KL V ++TAIGL+
Subjt:  LSANPVMHSKTKHVELDIYFVRDLVLQRKLLIQRLPAHEQIADILTKPLSTATFDQLKFKLNVREATAIGLR

A0A1S4E598 uncharacterized mitochondrial protein AtMg00810-like3.0e-8962.32Show/hide
Query:  MFLCQSTYIAEVLNRASMVDARSISTPMVSGSIPSAHQGESFHDPFLYRSIVGALQYVTMTRPEISYSVNKVCQFMHSPKDIHWK---------------
        +FL QS YI ++L R  M+DA+ IST MVSG + SA QGE FHD  LYRSIVGALQY T+T PEISYSVNK CQF+H+PK  HW+               
Subjt:  MFLCQSTYIAEVLNRASMVDARSISTPMVSGSIPSAHQGESFHDPFLYRSIVGALQYVTMTRPEISYSVNKVCQFMHSPKDIHWK---------------

Query:  -----PSRNLSLVGFADADWASDPDDRKSTTGFCVFFGNNLITWGSKKQGIISRSSTEAEYRSLATIAAELIWLKSLFSDLRICLPKPPIVWCDNLGAVH
              S N+SL GF DADWASDPDDRKST+GFCV+FGNNL++WGSKKQ II RSST+AEYR L  +A EL+W++SL +DL I LP PPI+WCDNL AVH
Subjt:  -----PSRNLSLVGFADADWASDPDDRKSTTGFCVFFGNNLITWGSKKQGIISRSSTEAEYRSLATIAAELIWLKSLFSDLRICLPKPPIVWCDNLGAVH

Query:  LSANPVMHSKTKHVELDIYFVRDLVLQRKLLIQRLPAHEQIADILTKPLSTATFDQLKFKLNVREATAIGLR-VLR
        LSAN ++HS TKHVELDIYFVRDL+ + KL I+ L A EQIADILTKPLS  +  +LK KL V ++ +IGL+ VLR
Subjt:  LSANPVMHSKTKHVELDIYFVRDLVLQRKLLIQRLPAHEQIADILTKPLSTATFDQLKFKLNVREATAIGLR-VLR

A0A5A7UFS3 Putative mitochondrial protein8.4e-9263.04Show/hide
Query:  MFLCQSTYIAEVLNRASMVDARSISTPMVSGSIPSAHQGESFHDPFLYRSIVGALQYVTMTRPEISYSVNKVCQFMHSPKDIHWK---------------
        +FL QS YI ++L R  M+DA+ ISTPMVSG + SA QGE FHD  L RS+VGALQY T+T PEISYSVNK CQFMH+PK  HW+               
Subjt:  MFLCQSTYIAEVLNRASMVDARSISTPMVSGSIPSAHQGESFHDPFLYRSIVGALQYVTMTRPEISYSVNKVCQFMHSPKDIHWK---------------

Query:  -----PSRNLSLVGFADADWASDPDDRKSTTGFCVFFGNNLITWGSKKQGIISRSSTEAEYRSLATIAAELIWLKSLFSDLRICLPKPPIVWCDNLGAVH
              S N SLVGFADADWASDPDDRKST+G CV+FGNNL++WGSKKQ IISRSSTEAEYR LA +A E++W++SL +DL I LP PPI+ CDNL AVH
Subjt:  -----PSRNLSLVGFADADWASDPDDRKSTTGFCVFFGNNLITWGSKKQGIISRSSTEAEYRSLATIAAELIWLKSLFSDLRICLPKPPIVWCDNLGAVH

Query:  LSANPVMHSKTKHVELDIYFVRDLVLQRKLLIQRLPAHEQIADILTKPLSTATFDQLKFKLNVREATAIGLR-VLR
         SANP++HSKTKHVELDIYFVRDL+ + KL ++ LPA EQIADILTKPLS  +F +LK  + V ++  IGL+ VLR
Subjt:  LSANPVMHSKTKHVELDIYFVRDLVLQRKLLIQRLPAHEQIADILTKPLSTATFDQLKFKLNVREATAIGLR-VLR

A0A5A7V553 Putative mitochondrial protein1.3e-8463.32Show/hide
Query:  MVDARSISTPMVSGSIPSAHQGESFHDPFLYRSIVGALQYVTMTRPEISYSVNKVCQFMHSPKDIHWK--------------------PSRNLSLVGFAD
        M+DA+ IST MVSG + SA QGE FHD  LYRSIVGALQY T+T PEISYSVNK CQF+H+PK  HW+                     S N+SL GF D
Subjt:  MVDARSISTPMVSGSIPSAHQGESFHDPFLYRSIVGALQYVTMTRPEISYSVNKVCQFMHSPKDIHWK--------------------PSRNLSLVGFAD

Query:  ADWASDPDDRKSTTGFCVFFGNNLITWGSKKQGIISRSSTEAEYRSLATIAAELIWLKSLFSDLRICLPKPPIVWCDNLGAVHLSANPVMHSKTKHVELD
        ADWASDPDDRKST+GFCV+FGNNL++WGSKKQ II RSST+AEYR L  +A EL+W++SL +DL I LP PPI+WCDNL AVHLSAN ++HS TKHVELD
Subjt:  ADWASDPDDRKSTTGFCVFFGNNLITWGSKKQGIISRSSTEAEYRSLATIAAELIWLKSLFSDLRICLPKPPIVWCDNLGAVHLSANPVMHSKTKHVELD

Query:  IYFVRDLVLQRKLLIQRLPAHEQIADILTKPLSTATFDQLKFKLNVREATAIGLR-VLR
        IYFVRDL+ + KL I+ L A EQIADILTKPLS  +  +LK KL V ++ +IGL+ VLR
Subjt:  IYFVRDLVLQRKLLIQRLPAHEQIADILTKPLSTATFDQLKFKLNVREATAIGLR-VLR

A0A5D3CFS1 Putative mitochondrial protein1.4e-8367.09Show/hide
Query:  GESFHDPFLYRSIVGALQYVTMTRPEISYSVNKVCQFMHSPKDIHW--------------------KPSRNLSLVGFADADWASDPDDRKSTTGFCVFFG
        GE FHD  LYRSIVGALQY T+T PEISYSVNK CQFMH+PK  HW                    + S N+SLVGFADADWASDPDDRKST+GF V+FG
Subjt:  GESFHDPFLYRSIVGALQYVTMTRPEISYSVNKVCQFMHSPKDIHW--------------------KPSRNLSLVGFADADWASDPDDRKSTTGFCVFFG

Query:  NNLITWGSKKQGIISRSSTEAEYRSLATIAAELIWLKSLFSDLRICLPKPPIVWCDNLGAVHLSANPVMHSKTKHVELDIYFVRDLVLQRKLLIQRLPAH
        NNL++WGSKK  IISRSSTEAEYR LA +A EL+W++SL +DL I LP PPI+WCDNL AVHLSANP++HSKTKHVELDIYFVRDL+ + KL ++ LPA 
Subjt:  NNLITWGSKKQGIISRSSTEAEYRSLATIAAELIWLKSLFSDLRICLPKPPIVWCDNLGAVHLSANPVMHSKTKHVELDIYFVRDLVLQRKLLIQRLPAH

Query:  EQIADILTKPLSTATFDQLKFKLNVREATAIGLR
        EQIADILTKPLS  +F  LK KL V ++TAIGL+
Subjt:  EQIADILTKPLSTATFDQLKFKLNVREATAIGLR

SwissProt top hitse value%identityAlignment
P04146 Copia protein4.8e-3632.09Show/hide
Query:  MFLCQSTYIAEVLNRASMVDARSISTPMVSG-SIPSAHQGESFHDPFLYRSIVGALQYVTM-TRPEISYSVN------------------KVCQFMHSPK
        ++L QS Y+ ++L++ +M +  ++STP+ S  +    +  E  + P   RS++G L Y+ + TRP+++ +VN                  +V +++    
Subjt:  MFLCQSTYIAEVLNRASMVDARSISTPMVSG-SIPSAHQGESFHDPFLYRSIVGALQYVTM-TRPEISYSVN------------------KVCQFMHSPK

Query:  DIHWKPSRNLS----LVGFADADWASDPDDRKSTTGFCV-FFGNNLITWGSKKQGIISRSSTEAEYRSLATIAAELIWLKSLFSDLRICLPKPPIVWCDN
        D+     +NL+    ++G+ D+DWA    DRKSTTG+    F  NLI W +K+Q  ++ SSTEAEY +L     E +WLK L + + I L  P  ++ DN
Subjt:  DIHWKPSRNLS----LVGFADADWASDPDDRKSTTGFCV-FFGNNLITWGSKKQGIISRSSTEAEYRSLATIAAELIWLKSLFSDLRICLPKPPIVWCDN

Query:  LGAVHLSANPVMHSKTKHVELDIYFVRDLVLQRKLLIQRLPAHEQIADILTKPLSTATFDQLKFKLNV
         G + ++ NP  H + KH+++  +F R+ V    + ++ +P   Q+ADI TKPL  A F +L+ KL +
Subjt:  LGAVHLSANPVMHSKTKHVELDIYFVRDLVLQRKLLIQRLPAHEQIADILTKPLSTATFDQLKFKLNV

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-943.3e-3231.44Show/hide
Query:  MFLCQSTYIAEVLNRASMVDARSISTPMV------SGSIPSAHQGESFHDPFLYRSIVGALQY-VTMTRPEISYSVNKVCQFMHSPKDIHWKPSR-----
        ++L Q  YI  VL R +M +A+ +STP+           P+  + +       Y S VG+L Y +  TRP+I+++V  V +F+ +P   HW+  +     
Subjt:  MFLCQSTYIAEVLNRASMVDARSISTPMV------SGSIPSAHQGESFHDPFLYRSIVGALQY-VTMTRPEISYSVNKVCQFMHSPKDIHWKPSR-----

Query:  --------------NLSLVGFADADWASDPDDRKSTTGFCVFFGNNLITWGSKKQGIISRSSTEAEYRSLATIAAELIWLKSLFSDLRICLPKPPIVWCD
                      +  L G+ DAD A D D+RKS+TG+   F    I+W SK Q  ++ S+TEAEY +      E+IWLK    +L +   K  +V+CD
Subjt:  --------------NLSLVGFADADWASDPDDRKSTTGFCVFFGNNLITWGSKKQGIISRSSTEAEYRSLATIAAELIWLKSLFSDLRICLPKPPIVWCD

Query:  NLGAVHLSANPVMHSKTKHVELDIYFVRDLVLQRKLLIQRLPAHEQIADILTKPLSTATFDQLK
        +  A+ LS N + H++TKH+++  +++R++V    L + ++  +E  AD+LTK +    F+  K
Subjt:  NLGAVHLSANPVMHSKTKHVELDIYFVRDLVLQRKLLIQRLPAHEQIADILTKPLSTATFDQLK

P92519 Uncharacterized mitochondrial protein AtMg008102.3e-3343.18Show/hide
Query:  MFLCQSTYIAEVLNRASMVDARSISTPM---VSGSIPSAHQGESFHDPFLYRSIVGALQYVTMTRPEISYSVNKVCQFMHSP------------------
        +FL Q+ Y  ++LN A M+D + +STP+   ++ S+ +A     + DP  +RSIVGALQY+T+TRP+ISY+VN VCQ MH P                  
Subjt:  MFLCQSTYIAEVLNRASMVDARSISTPM---VSGSIPSAHQGESFHDPFLYRSIVGALQYVTMTRPEISYSVNKVCQFMHSP------------------

Query:  --KDIHWKPSRNLSLVGFADADWASDPDDRKSTTGFCVFFGNNLITWGSKKQGIISRSSTEAEYRSLATIAAELIW
            ++   +  L++  F D+DWA     R+STTGFC F G N+I+W +K+Q  +SRSSTE EYR+LA  AAEL W
Subjt:  --KDIHWKPSRNLSLVGFADADWASDPDDRKSTTGFCVFFGNNLITWGSKKQGIISRSSTEAEYRSLATIAAELIW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.0e-5742.59Show/hide
Query:  MFLCQSTYIAEVLNRASMVDARSISTPMVSGSIPSAHQGESFHDPFLYRSIVGALQYVTMTRPEISYSVNKVCQFMHSPKDIH-----------------
        + L Q  YI ++L R +M+ A+ ++TPM      S + G    DP  YR IVG+LQY+  TRP+ISY+VN++ QFMH P + H                 
Subjt:  MFLCQSTYIAEVLNRASMVDARSISTPMVSGSIPSAHQGESFHDPFLYRSIVGALQYVTMTRPEISYSVNKVCQFMHSPKDIH-----------------

Query:  ---WKPSRNLSLVGFADADWASDPDDRKSTTGFCVFFGNNLITWGSKKQGIISRSSTEAEYRSLATIAAELIWLKSLFSDLRICLPKPPIVWCDNLGAVH
            K    LSL  ++DADWA D DD  ST G+ V+ G++ I+W SKKQ  + RSSTEAEYRS+A  ++E+ W+ SL ++L I L +PP+++CDN+GA +
Subjt:  ---WKPSRNLSLVGFADADWASDPDDRKSTTGFCVFFGNNLITWGSKKQGIISRSSTEAEYRSLATIAAELIWLKSLFSDLRICLPKPPIVWCDNLGAVH

Query:  LSANPVMHSKTKHVELDIYFVRDLVLQRKLLIQRLPAHEQIADILTKPLSTATFDQLKFKLNV
        L ANPV HS+ KH+ +D +F+R+ V    L +  +  H+Q+AD LTKPLS   F     K+ V
Subjt:  LSANPVMHSKTKHVELDIYFVRDLVLQRKLLIQRLPAHEQIADILTKPLSTATFDQLKFKLNV

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE25.3e-5942.97Show/hide
Query:  MFLCQSTYIAEVLNRASMVDARSISTPMVSGSIPSAHQGESFHDPFLYRSIVGALQYVTMTRPEISYSVNKVCQFMHSPKDIHW----------------
        + L Q  Y  ++L R +M+ A+ ++TPM +    + H G    DP  YR IVG+LQY+  TRP++SY+VN++ Q+MH P D HW                
Subjt:  MFLCQSTYIAEVLNRASMVDARSISTPMVSGSIPSAHQGESFHDPFLYRSIVGALQYVTMTRPEISYSVNKVCQFMHSPKDIHW----------------

Query:  ----KPSRNLSLVGFADADWASDPDDRKSTTGFCVFFGNNLITWGSKKQGIISRSSTEAEYRSLATIAAELIWLKSLFSDLRICLPKPPIVWCDNLGAVH
            K    LSL  ++DADWA D DD  ST G+ V+ G++ I+W SKKQ  + RSSTEAEYRS+A  ++EL W+ SL ++L I L  PP+++CDN+GA +
Subjt:  ----KPSRNLSLVGFADADWASDPDDRKSTTGFCVFFGNNLITWGSKKQGIISRSSTEAEYRSLATIAAELIWLKSLFSDLRICLPKPPIVWCDNLGAVH

Query:  LSANPVMHSKTKHVELDIYFVRDLVLQRKLLIQRLPAHEQIADILTKPLSTATFDQLKFKLNV
        L ANPV HS+ KH+ LD +F+R+ V    L +  +  H+Q+AD LTKPLS   F     K+ V
Subjt:  LSANPVMHSKTKHVELDIYFVRDLVLQRKLLIQRLPAHEQIADILTKPLSTATFDQLKFKLNV

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 86.1e-4234.87Show/hide
Query:  LCQSTYIAEVLNRASMVDARSISTPMVSGSIPSAHQGESFHDPFLYRSIVGALQYVTMTRPEISYSVNKVCQFMHSPKDIH-------------------
        +CQ  Y  ++L+   ++  +  S PM      SAH G  F D   YR ++G L Y+ +TR +IS++VNK+ QF  +P+  H                   
Subjt:  LCQSTYIAEVLNRASMVDARSISTPMVSGSIPSAHQGESFHDPFLYRSIVGALQYVTMTRPEISYSVNKVCQFMHSPKDIH-------------------

Query:  -WKPSRNLSLVGFADADWASDPDDRKSTTGFCVFFGNNLITWGSKKQGIISRSSTEAEYRSLATIAAELIWLKSLFSDLRICLPKPPIVWCDNLGAVHLS
         +     + L  F+DA + S  D R+ST G+C+F G +LI+W SKKQ ++S+SS EAEYR+L+    E++WL   F +L++ L KP +++CDN  A+H++
Subjt:  -WKPSRNLSLVGFADADWASDPDDRKSTTGFCVFFGNNLITWGSKKQGIISRSSTEAEYRSLATIAAELIWLKSLFSDLRICLPKPPIVWCDNLGAVHLS

Query:  ANPVMHSKTKHVELDIYFVRDLVLQRKLLIQRLPAHEQ
         N V H +TKH+E D + VR+  + +  L     A+++
Subjt:  ANPVMHSKTKHVELDIYFVRDLVLQRKLLIQRLPAHEQ

ATMG00240.1 Gag-Pol-related retrotransposon family protein7.5e-0835.9Show/hide
Query:  YVTMTRPEISYSVNKVCQF---------------MHSPK-----DIHWKPSRNLSLVGFADADWASDPDDRKSTTGFC
        Y+T+TRP+++++VN++ QF               +H  K      + +  + +L L  FAD+DWAS PD R+S TGFC
Subjt:  YVTMTRPEISYSVNKVCQF---------------MHSPK-----DIHWKPSRNLSLVGFADADWASDPDDRKSTTGFC

ATMG00810.1 DNA/RNA polymerases superfamily protein1.6e-3443.18Show/hide
Query:  MFLCQSTYIAEVLNRASMVDARSISTPM---VSGSIPSAHQGESFHDPFLYRSIVGALQYVTMTRPEISYSVNKVCQFMHSP------------------
        +FL Q+ Y  ++LN A M+D + +STP+   ++ S+ +A     + DP  +RSIVGALQY+T+TRP+ISY+VN VCQ MH P                  
Subjt:  MFLCQSTYIAEVLNRASMVDARSISTPM---VSGSIPSAHQGESFHDPFLYRSIVGALQYVTMTRPEISYSVNKVCQFMHSP------------------

Query:  --KDIHWKPSRNLSLVGFADADWASDPDDRKSTTGFCVFFGNNLITWGSKKQGIISRSSTEAEYRSLATIAAELIW
            ++   +  L++  F D+DWA     R+STTGFC F G N+I+W +K+Q  +SRSSTE EYR+LA  AAEL W
Subjt:  --KDIHWKPSRNLSLVGFADADWASDPDDRKSTTGFCVFFGNNLITWGSKKQGIISRSSTEAEYRSLATIAAELIW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCTCTGCCAATCTACTTACATTGCTGAGGTGCTTAATCGTGCTAGTATGGTTGATGCTCGTTCTATTTCCACTCCTATGGTTAGTGGATCCATACCCTCGGCACA
TCAAGGTGAATCCTTTCATGATCCTTTCCTTTATAGAAGCATTGTTGGTGCCTTGCAATATGTTACAATGACTCGACCCGAAATCTCATATAGTGTCAATAAGGTTTGTC
AATTCATGCATTCTCCTAAAGATATTCATTGGAAACCTTCTCGTAACTTATCTCTTGTTGGTTTTGCTGATGCTGACTGGGCATCGGATCCTGATGATCGTAAGTCTACT
ACTGGATTTTGTGTCTTTTTTGGTAACAATTTGATTACTTGGGGGTCTAAGAAGCAAGGTATTATCTCTCGCTCTAGTACTGAAGCTGAATATCGTAGTTTAGCTACTAT
TGCTGCTGAGCTTATCTGGTTGAAATCATTATTTTCTGACTTACGTATTTGTTTACCCAAACCACCTATTGTATGGTGTGATAACTTGGGTGCAGTTCATCTTAGTGCTA
ACCCTGTTATGCATTCCAAAACTAAACATGTTGAGCTTGATATTTACTTTGTGCGAGATCTTGTTCTTCAACGGAAGCTTCTTATTCAACGTCTTCCAGCACATGAGCAG
ATAGCAGATATTCTTACAAAGCCATTGTCTACAGCTACTTTTGATCAACTAAAATTCAAGCTCAATGTCCGTGAGGCCACTGCCATTGGCTTGCGGGTATTAAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTCTCTGCCAATCTACTTACATTGCTGAGGTGCTTAATCGTGCTAGTATGGTTGATGCTCGTTCTATTTCCACTCCTATGGTTAGTGGATCCATACCCTCGGCACA
TCAAGGTGAATCCTTTCATGATCCTTTCCTTTATAGAAGCATTGTTGGTGCCTTGCAATATGTTACAATGACTCGACCCGAAATCTCATATAGTGTCAATAAGGTTTGTC
AATTCATGCATTCTCCTAAAGATATTCATTGGAAACCTTCTCGTAACTTATCTCTTGTTGGTTTTGCTGATGCTGACTGGGCATCGGATCCTGATGATCGTAAGTCTACT
ACTGGATTTTGTGTCTTTTTTGGTAACAATTTGATTACTTGGGGGTCTAAGAAGCAAGGTATTATCTCTCGCTCTAGTACTGAAGCTGAATATCGTAGTTTAGCTACTAT
TGCTGCTGAGCTTATCTGGTTGAAATCATTATTTTCTGACTTACGTATTTGTTTACCCAAACCACCTATTGTATGGTGTGATAACTTGGGTGCAGTTCATCTTAGTGCTA
ACCCTGTTATGCATTCCAAAACTAAACATGTTGAGCTTGATATTTACTTTGTGCGAGATCTTGTTCTTCAACGGAAGCTTCTTATTCAACGTCTTCCAGCACATGAGCAG
ATAGCAGATATTCTTACAAAGCCATTGTCTACAGCTACTTTTGATCAACTAAAATTCAAGCTCAATGTCCGTGAGGCCACTGCCATTGGCTTGCGGGTATTAAGATAG
Protein sequenceShow/hide protein sequence
MFLCQSTYIAEVLNRASMVDARSISTPMVSGSIPSAHQGESFHDPFLYRSIVGALQYVTMTRPEISYSVNKVCQFMHSPKDIHWKPSRNLSLVGFADADWASDPDDRKST
TGFCVFFGNNLITWGSKKQGIISRSSTEAEYRSLATIAAELIWLKSLFSDLRICLPKPPIVWCDNLGAVHLSANPVMHSKTKHVELDIYFVRDLVLQRKLLIQRLPAHEQ
IADILTKPLSTATFDQLKFKLNVREATAIGLRVLR