; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0031809 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031809
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionMitochondrial transcription termination factor family protein
Genome locationchr11:15125843..15126497
RNA-Seq ExpressionLag0031809
SyntenyLag0031809
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003690 - double-stranded DNA binding (molecular function)
InterPro domainsIPR003690 - Transcription termination factor, mitochondrial/chloroplastic
IPR038538 - MTERF superfamily, mitochondrial/chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605716.1 Transcription termination factor MTERF15, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]6.5e-3052.41Show/hide
Query:  MPLETALDVASKVKFKTPKKPDLVLSLLRSQGFAKSQISKIVKNFPSLLFF-----------------------------NSDRT--------LLPKFEF
        MPL+TALDVASKVKFKTPK PD+VLSLLR+QGF KSQISKIVK FP LLFF                              S R         + P  E 
Subjt:  MPLETALDVASKVKFKTPKKPDLVLSLLRSQGFAKSQISKIVKNFPSLLFF-----------------------------NSDRT--------LLPKFEF

Query:  LYSIGLS----KSECVQIVYSSFLQHAKFCSIVNQVRDMGFHPLKLVFVDAIRVLSGMTSFTWERK
        L + G+S     S    +  S+F +H+KF SIVNQVRDMGF P K+VFV+AIRVLSGM+S TWERK
Subjt:  LYSIGLS----KSECVQIVYSSFLQHAKFCSIVNQVRDMGFHPLKLVFVDAIRVLSGMTSFTWERK

KAG7035624.1 Transcription termination factor MTERF15, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-4153.3Show/hide
Query:  FSVLADKALFGPLEDGRIQCFTVSYLVNSCGMPLETALDVASKVKFKTPKKPDLVLSLLRSQGFAKSQISKIVKNFPSLLFFNS----------------
        FSVL   A FG L+D  I  FTVSYLVNSCGMPL+TALDVASKVKFKTPK PD+VLSLLR+QGF KS ISKIVK FP LLFF++                
Subjt:  FSVLADKALFGPLEDGRIQCFTVSYLVNSCGMPLETALDVASKVKFKTPKKPDLVLSLLRSQGFAKSQISKIVKNFPSLLFFNS----------------

Query:  ---------------------DRTLLPKFEFLYSIGLS----KSECVQIVYSSFLQHAKFCSIVNQVRDMGFHPLKLVFVDAIRVLSGMTSFTWERK
                                + P  E L + G+S     S    +  S+F +H+KF SIVNQVRDMGF P K+VFV+AIRVLSGM+S TWERK
Subjt:  ---------------------DRTLLPKFEFLYSIGLS----KSECVQIVYSSFLQHAKFCSIVNQVRDMGFHPLKLVFVDAIRVLSGMTSFTWERK

XP_022156115.1 uncharacterized protein LOC111023077 [Momordica charantia]4.1e-5652.4Show/hide
Query:  MFRILGFTILS-SSRRVAVPTSFFDNLGFHRDSLFSLKFFSVLADKALFGPLEDGRIQCFTVSYLVNSCGMPLETALDVASKVKFKTPKKPDLVLSLLRS
        MFRILG  I S SSRR+AV TSFF+NLGF RD     KFFSVLADK   G  E   I    V YLVNSCGM  ETALDVA+KV FKTP +PDLVLSLLRS
Subjt:  MFRILGFTILS-SSRRVAVPTSFFDNLGFHRDSLFSLKFFSVLADKALFGPLEDGRIQCFTVSYLVNSCGMPLETALDVASKVKFKTPKKPDLVLSLLRS

Query:  QGFAKSQISKIVKNFPSLLFFNSDRTLLPKFEFLYSIGLSKSECVQIVY---------------------------------------------------
        QG  K+QISK++K FPSLLFFNSDRTLLPKFEFL+SIGLSKSEC  IVY                                                   
Subjt:  QGFAKSQISKIVKNFPSLLFFNSDRTLLPKFEFLYSIGLSKSECVQIVY---------------------------------------------------

Query:  -------------------------SSFLQHAKFCSIVNQVRDMGFHPLKLVFVDAIRVLSGMTSFTWERK
                                 S+FL H+KFC+IVN+VRD+G  P K+VFV+AIRVLSGMTS TWERK
Subjt:  -------------------------SSFLQHAKFCSIVNQVRDMGFHPLKLVFVDAIRVLSGMTSFTWERK

XP_023907554.1 transcription termination factor MTERF2, chloroplastic-like [Quercus suber]8.8e-2734.07Show/hide
Query:  MFRILG---FTILSSSRRVAVPTSFFDNLGFHRDSLFSLKFFSVLADKALFGPLEDGRIQCFTVSYLVNSCGMPLETALDVASKVKFKTPKKPDLVLSLL
        MFRIL      ++  SR +AVP+S   +LGF +  LF + +FS          L D +   FTVS+LVNSCG+ LE A  V+ +V F+T ++P+LVL+LL
Subjt:  MFRILG---FTILSSSRRVAVPTSFFDNLGFHRDSLFSLKFFSVLADKALFGPLEDGRIQCFTVSYLVNSCGMPLETALDVASKVKFKTPKKPDLVLSLL

Query:  RSQGFAKSQISKIVKNFPSLLFFNSDRTLLPKFEFLYSIGLSKSECVQIV--------------------------------------------------
        ++ GF  +QISK+VK  P LL  + ++TLLPKFEFL SIGLS SEC  I+                                                  
Subjt:  RSQGFAKSQISKIVKNFPSLLFFNSDRTLLPKFEFLYSIGLSKSECVQIV--------------------------------------------------

Query:  --------------------------YSSFLQHAKFCSIVNQVRDMGFHPLKLVFVDAIRVLSGMTSFTWERK
                                   ++FL+HAKF  IVN+V ++GF+P K  F+ AI VL+ +    WE +
Subjt:  --------------------------YSSFLQHAKFCSIVNQVRDMGFHPLKLVFVDAIRVLSGMTSFTWERK

XP_030948785.1 transcription termination factor MTERF2, chloroplastic-like [Quercus lobata]4.8e-2532.56Show/hide
Query:  SRRVAVPTSFFDNLGFHRDSLFSLKFFSVLADKALFGPLEDGRIQCFTVSYLVNSCGMPLETALDVASKVKFKTPKKPDLVLSLLRSQGFAKSQISKIVK
        SR +AVP+S   +LGF +   FS+ +FS          L D +   FTVS+LVNSCG+ LE A   + +V F+T ++P+LVL+LL++ GF  +QIS++VK
Subjt:  SRRVAVPTSFFDNLGFHRDSLFSLKFFSVLADKALFGPLEDGRIQCFTVSYLVNSCGMPLETALDVASKVKFKTPKKPDLVLSLLRSQGFAKSQISKIVK

Query:  NFPSLLFFNSDRTLLPKFEFLYSIGLSKSECVQIVY----------------------------------------------------------------
          P LL  + ++TLLPKFEFL SIGLS SEC  I+                                                                 
Subjt:  NFPSLLFFNSDRTLLPKFEFLYSIGLSKSECVQIVY----------------------------------------------------------------

Query:  ------------SSFLQHAKFCSIVNQVRDMGFHPLKLVFVDAIRVLSGMTSFTWERK
                    ++FL+HAKF  IV ++ ++GF+P K  F+ AI VL+ +    WE +
Subjt:  ------------SSFLQHAKFCSIVNQVRDMGFHPLKLVFVDAIRVLSGMTSFTWERK

TrEMBL top hitse value%identityAlignment
A0A2N9EC15 Uncharacterized protein7.8e-2933.08Show/hide
Query:  ILSSSRRVAVPTSFFDNLGFHRDSLFSLKFFSVLADKALFGPLEDGRIQCFTVSYLVNSCGMPLETALDVASKVKFKTPKKPDLVLSLLRSQGFAKSQIS
        IL S+R +AVP+S   +LGF ++ LF + +FS     +  GP +D +   FTVSYLVNSCG+PLE A   + ++ F+T ++PDLVL+LL++ GF  +QIS
Subjt:  ILSSSRRVAVPTSFFDNLGFHRDSLFSLKFFSVLADKALFGPLEDGRIQCFTVSYLVNSCGMPLETALDVASKVKFKTPKKPDLVLSLLRSQGFAKSQIS

Query:  KIVKNFPSLLFFNSDRTLLPKFEFLYSIGLSKSECVQIV-------------------------------------------------------------
        K+V   P LL  + ++T+ PK EFL SIGLS SEC +I+                                                             
Subjt:  KIVKNFPSLLFFNSDRTLLPKFEFLYSIGLSKSECVQIV-------------------------------------------------------------

Query:  ---------------YSSFLQHAKFCSIVNQVRDMGFHPLKLVFVDAIRVLSGMTSFTWERKL
                        ++F++H KF  +V +V+++GF P+K VFV AI VL+      WE K+
Subjt:  ---------------YSSFLQHAKFCSIVNQVRDMGFHPLKLVFVDAIRVLSGMTSFTWERKL

A0A2N9ECB7 Uncharacterized protein7.3e-2732.32Show/hide
Query:  ILSSSRRVAVPTSFFDNLGFHRDSLFSLKFFSVLADKALFGPLEDGRIQCFTVSYLVNSCGMPLETALDVASKVKFKTPKKPDLVLSLLRSQGFAKSQIS
        IL  +R +AVP+S   +LGF ++ LF + +FS     +  GP +D +   FTVSYLVNSCG+PLE A   + ++ F+T + PDLVL+LL++ GF  +QIS
Subjt:  ILSSSRRVAVPTSFFDNLGFHRDSLFSLKFFSVLADKALFGPLEDGRIQCFTVSYLVNSCGMPLETALDVASKVKFKTPKKPDLVLSLLRSQGFAKSQIS

Query:  KIVKNFPSLLFFNSDRTLLPKFEFLYSIGLSKSECVQIV-------------------------------------------------------------
        K+V   P LL  + ++T+  K EFL SIGLS SEC +I+                                                             
Subjt:  KIVKNFPSLLFFNSDRTLLPKFEFLYSIGLSKSECVQIV-------------------------------------------------------------

Query:  ---------------YSSFLQHAKFCSIVNQVRDMGFHPLKLVFVDAIRVLSGMTSFTWERKL
                        ++F++H KF  +V +V+++GF P+K VFV AI VL+      WE K+
Subjt:  ---------------YSSFLQHAKFCSIVNQVRDMGFHPLKLVFVDAIRVLSGMTSFTWERKL

A0A6J1DPE0 uncharacterized protein LOC1110230772.0e-5652.4Show/hide
Query:  MFRILGFTILS-SSRRVAVPTSFFDNLGFHRDSLFSLKFFSVLADKALFGPLEDGRIQCFTVSYLVNSCGMPLETALDVASKVKFKTPKKPDLVLSLLRS
        MFRILG  I S SSRR+AV TSFF+NLGF RD     KFFSVLADK   G  E   I    V YLVNSCGM  ETALDVA+KV FKTP +PDLVLSLLRS
Subjt:  MFRILGFTILS-SSRRVAVPTSFFDNLGFHRDSLFSLKFFSVLADKALFGPLEDGRIQCFTVSYLVNSCGMPLETALDVASKVKFKTPKKPDLVLSLLRS

Query:  QGFAKSQISKIVKNFPSLLFFNSDRTLLPKFEFLYSIGLSKSECVQIVY---------------------------------------------------
        QG  K+QISK++K FPSLLFFNSDRTLLPKFEFL+SIGLSKSEC  IVY                                                   
Subjt:  QGFAKSQISKIVKNFPSLLFFNSDRTLLPKFEFLYSIGLSKSECVQIVY---------------------------------------------------

Query:  -------------------------SSFLQHAKFCSIVNQVRDMGFHPLKLVFVDAIRVLSGMTSFTWERK
                                 S+FL H+KFC+IVN+VRD+G  P K+VFV+AIRVLSGMTS TWERK
Subjt:  -------------------------SSFLQHAKFCSIVNQVRDMGFHPLKLVFVDAIRVLSGMTSFTWERK

A0A7N2N3D5 Uncharacterized protein2.3e-2532.56Show/hide
Query:  SRRVAVPTSFFDNLGFHRDSLFSLKFFSVLADKALFGPLEDGRIQCFTVSYLVNSCGMPLETALDVASKVKFKTPKKPDLVLSLLRSQGFAKSQISKIVK
        SR +AVP+S   +LGF +   FS+ +FS          L D +   FTVS+LVNSCG+ LE A   + +V F+T ++P+LVL+LL++ GF  +QIS++VK
Subjt:  SRRVAVPTSFFDNLGFHRDSLFSLKFFSVLADKALFGPLEDGRIQCFTVSYLVNSCGMPLETALDVASKVKFKTPKKPDLVLSLLRSQGFAKSQISKIVK

Query:  NFPSLLFFNSDRTLLPKFEFLYSIGLSKSECVQIVY----------------------------------------------------------------
          P LL  + ++TLLPKFEFL SIGLS SEC  I+                                                                 
Subjt:  NFPSLLFFNSDRTLLPKFEFLYSIGLSKSECVQIVY----------------------------------------------------------------

Query:  ------------SSFLQHAKFCSIVNQVRDMGFHPLKLVFVDAIRVLSGMTSFTWERK
                    ++FL+HAKF  IV ++ ++GF+P K  F+ AI VL+ +    WE +
Subjt:  ------------SSFLQHAKFCSIVNQVRDMGFHPLKLVFVDAIRVLSGMTSFTWERK

A0A7N2N4F1 Uncharacterized protein5.2e-2532.95Show/hide
Query:  SRRVAVPTSFFDNLGFHRDSLFSLKFFSVLADKALFGPLEDGRIQCFTVSYLVNSCGMPLETALDVASKVKFKTPKKPDLVLSLLRSQGFAKSQISKIVK
        SR +AVP+S    LGF +  LF + +FS          L D +   FTVS+LVNSCG+ LE A   + +V F+T ++P+LVL+LL++ GF  +QISK+VK
Subjt:  SRRVAVPTSFFDNLGFHRDSLFSLKFFSVLADKALFGPLEDGRIQCFTVSYLVNSCGMPLETALDVASKVKFKTPKKPDLVLSLLRSQGFAKSQISKIVK

Query:  NFPSLLFFNSDRTLLPKFEFLYSIGLSKSECVQIV-----------------------------------------------------------------
          P LL  + ++TLLPKFEFL SIGLS +EC  I+                                                                 
Subjt:  NFPSLLFFNSDRTLLPKFEFLYSIGLSKSECVQIV-----------------------------------------------------------------

Query:  -----------YSSFLQHAKFCSIVNQVRDMGFHPLKLVFVDAIRVLSGMTSFTWERK
                    ++FL+HAKF  IV +V ++GF+P K  F+ AI VL+ +    WE +
Subjt:  -----------YSSFLQHAKFCSIVNQVRDMGFHPLKLVFVDAIRVLSGMTSFTWERK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G61960.1 Mitochondrial transcription termination factor family protein5.2e-1744.04Show/hide
Query:  FSVLADKALFGPLEDGRIQCFTVSYLVNSCGMPLETALDVASKVKFKTPKKPDLVLSLLRSQGFAKSQISKIVKNFPSLLFFNSDRTLLPKFEFLYSIGL
        F+ +AD  L   L+      FTVSYLV+S G+  + A  ++ KV F+  + PD VLSLL S GF KSQIS I+  +P LL  ++++++ PK + L S G 
Subjt:  FSVLADKALFGPLEDGRIQCFTVSYLVNSCGMPLETALDVASKVKFKTPKKPDLVLSLLRSQGFAKSQISKIVKNFPSLLFFNSDRTLLPKFEFLYSIGL

Query:  SKSECVQIV
        S SE  QIV
Subjt:  SKSECVQIV

AT1G61980.1 Mitochondrial transcription termination factor family protein3.6e-1846.67Show/hide
Query:  ADKALFGPLEDGRIQCFTVSYLVNSCGMPLETALDVASKVKFKTPKKPDLVLSLLRSQGFAKSQISKIVKNFPSLLFFNSDRTLLPKFEFLYSIGLSKSE
        A  A   P    + + FTVSYLV+S G+P + A  V+ KV F+    PD VL+LLRS GF  SQIS IV ++P LL  +++++L PK +FL S G S SE
Subjt:  ADKALFGPLEDGRIQCFTVSYLVNSCGMPLETALDVASKVKFKTPKKPDLVLSLLRSQGFAKSQISKIVKNFPSLLFFNSDRTLLPKFEFLYSIGLSKSE

Query:  CVQIV
          +IV
Subjt:  CVQIV

AT1G62085.1 Mitochondrial transcription termination factor family protein2.3e-1740.29Show/hide
Query:  LSSSRRVAVPTSFFDNLGFHRDSLFSLKFFSVLADKALFGPLEDGRI-QCFTVSYLVNSCGMPLETALDVASKVKFKTPKKPDLVLSLLRSQGFAKSQIS
        L   R ++VP +  +     + S FS  F    A  A    L  GR    F+VSYLV+S G+P + A  ++ KV F+    PD VLSLLRS GF  SQIS
Subjt:  LSSSRRVAVPTSFFDNLGFHRDSLFSLKFFSVLADKALFGPLEDGRI-QCFTVSYLVNSCGMPLETALDVASKVKFKTPKKPDLVLSLLRSQGFAKSQIS

Query:  KIVKNFPSLLFFNSDRTLLPKFEFLYSIGLSKSECVQIV
         I+ ++P LL  ++++++ PK +FL S G S+SE   IV
Subjt:  KIVKNFPSLLFFNSDRTLLPKFEFLYSIGLSKSECVQIV

AT1G62120.1 Mitochondrial transcription termination factor family protein2.1e-1845.53Show/hide
Query:  FHRDSLFSLKFFS--VLADKALFGPLEDGRI-QCFTVSYLVNSCGMPLETALDVASKVKFKTPKKPDLVLSLLRSQGFAKSQISKIVKNFPSLLFFNSDR
        F   S FS  F S  + AD +      DGR    FTVSYLV+S G+  + A  ++ KV F     PD VLSLLRS GF  SQIS I++ FP LL  ++++
Subjt:  FHRDSLFSLKFFS--VLADKALFGPLEDGRI-QCFTVSYLVNSCGMPLETALDVASKVKFKTPKKPDLVLSLLRSQGFAKSQISKIVKNFPSLLFFNSDR

Query:  TLLPKFEFLYSIGLSKSECVQIV
        +L PK +FL SIG S SE  + V
Subjt:  TLLPKFEFLYSIGLSKSECVQIV

AT5G07900.1 Mitochondrial transcription termination factor family protein8.8e-1733.14Show/hide
Query:  HRDSLF----SLKFFSVLADKALFGPLEDGRIQ--CFTVSYLVNSCGMPLETALDVASKVKFKTPKKPDLVLSLLRSQGFAKSQISKIVKNFPSLLFFNS
        HR  +F      +F S +       P +D + Q   FT++YL++SCG+  ++A   + K+   +P++P+ VL+LLR  GF  +QIS +VK  P LL  N+
Subjt:  HRDSLF----SLKFFSVLADKALFGPLEDGRIQ--CFTVSYLVNSCGMPLETALDVASKVKFKTPKKPDLVLSLLRSQGFAKSQISKIVKNFPSLLFFNS

Query:  DRTLLPKFEFLYSIGLSKSECVQIVYSSFLQHAKFCSIVNQVRDMGFHPLKLVFVDAIRVLSGMTSFTW
        +  LLPK  F  SIG+SKS   + + S      +  S+VNQ+    ++ LK V     ++++ +   TW
Subjt:  DRTLLPKFEFLYSIGLSKSECVQIVYSSFLQHAKFCSIVNQVRDMGFHPLKLVFVDAIRVLSGMTSFTW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCGAATTTTAGGGTTCACAATCTTAAGTTCTAGCAGGAGGGTTGCAGTCCCCACCTCATTCTTCGACAATCTAGGGTTTCATCGAGACTCCTTATTTAGCTTAAA
ATTCTTCTCAGTGCTTGCCGATAAAGCATTGTTCGGACCTTTGGAAGATGGGCGTATACAATGTTTCACAGTTTCATACCTCGTCAATTCTTGCGGAATGCCGTTAGAGA
CTGCTCTGGATGTGGCTTCCAAGGTAAAATTCAAAACTCCGAAAAAACCTGATTTAGTTCTCTCGCTTCTCCGAAGCCAAGGATTCGCAAAATCTCAGATTTCTAAGATT
GTTAAGAATTTCCCGAGTTTGCTGTTTTTTAACTCTGACAGAACACTTTTGCCCAAATTTGAATTTCTGTATTCCATTGGGCTTTCTAAGTCAGAATGTGTTCAAATTGT
TTATTCATCATTCCTTCAGCATGCCAAATTCTGCAGCATTGTTAACCAAGTTAGGGATATGGGATTTCACCCTTTAAAGCTTGTGTTTGTTGATGCCATTAGAGTGCTAT
CTGGGATGACTTCTTTCACCTGGGAAAGAAAGCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTCGAATTTTAGGGTTCACAATCTTAAGTTCTAGCAGGAGGGTTGCAGTCCCCACCTCATTCTTCGACAATCTAGGGTTTCATCGAGACTCCTTATTTAGCTTAAA
ATTCTTCTCAGTGCTTGCCGATAAAGCATTGTTCGGACCTTTGGAAGATGGGCGTATACAATGTTTCACAGTTTCATACCTCGTCAATTCTTGCGGAATGCCGTTAGAGA
CTGCTCTGGATGTGGCTTCCAAGGTAAAATTCAAAACTCCGAAAAAACCTGATTTAGTTCTCTCGCTTCTCCGAAGCCAAGGATTCGCAAAATCTCAGATTTCTAAGATT
GTTAAGAATTTCCCGAGTTTGCTGTTTTTTAACTCTGACAGAACACTTTTGCCCAAATTTGAATTTCTGTATTCCATTGGGCTTTCTAAGTCAGAATGTGTTCAAATTGT
TTATTCATCATTCCTTCAGCATGCCAAATTCTGCAGCATTGTTAACCAAGTTAGGGATATGGGATTTCACCCTTTAAAGCTTGTGTTTGTTGATGCCATTAGAGTGCTAT
CTGGGATGACTTCTTTCACCTGGGAAAGAAAGCTTTGA
Protein sequenceShow/hide protein sequence
MFRILGFTILSSSRRVAVPTSFFDNLGFHRDSLFSLKFFSVLADKALFGPLEDGRIQCFTVSYLVNSCGMPLETALDVASKVKFKTPKKPDLVLSLLRSQGFAKSQISKI
VKNFPSLLFFNSDRTLLPKFEFLYSIGLSKSECVQIVYSSFLQHAKFCSIVNQVRDMGFHPLKLVFVDAIRVLSGMTSFTWERKL