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Lag0031818 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031818
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein FAR1-RELATED SEQUENCE 4-like
Genome locationchr11:15334061..15335528
RNA-Seq ExpressionLag0031818
SyntenyLag0031818
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148136.1 uncharacterized protein LOC111016889 [Momordica charantia]2.1e-3053.66Show/hide
Query:  NNARRHVVTPIDRYEFQVDDGNLVGRVNIHTRTCTCREFDVFQLSCSHAIAACIYQNVLYLDLCSPCYRVEAVLATYVEPIYPVGHVSEWKTSKNFVDIE
        +NARRHVV  ID++  QV DGNL G V+ ++RTC+CREFD F++ CSHAIA  + +N+    LC   Y   + +  Y EPI+P+GHVS WK+S +FVD  
Subjt:  NNARRHVVTPIDRYEFQVDDGNLVGRVNIHTRTCTCREFDVFQLSCSHAIAACIYQNVLYLDLCSPCYRVEAVLATYVEPIYPVGHVSEWKTSKNFVDIE

Query:  VLSPKRIPRVGRRQTLRIPSRGE
        V +P  +PRVGRR+T+RIPS GE
Subjt:  VLSPKRIPRVGRRQTLRIPSRGE

XP_022155156.1 uncharacterized protein LOC111022299 [Momordica charantia]3.6e-3047.18Show/hide
Query:  TTRAS------NSAVMPAENNARRHVVTPIDRYEFQVDDGNLVGRVNIHTRTCTCREFDVFQLSCSHAIAACIYQNVLYLDLCSPCYRVEAVLATYVEPI
        +TRAS         V  A   AR+H + PID YE++V DGN   RVN+++++CTC++FD +Q+ CSHA+ A +++NV    LCSP Y++E +L TY EPI
Subjt:  TTRAS------NSAVMPAENNARRHVVTPIDRYEFQVDDGNLVGRVNIHTRTCTCREFDVFQLSCSHAIAACIYQNVLYLDLCSPCYRVEAVLATYVEPI

Query:  YPVGHVSEWKTSKNFVDIEVLSPKRIPRVGRRQTLRIPSRGE
        YP+G   +W    +FV+  +  PK + RVGRRQT+RIPS GE
Subjt:  YPVGHVSEWKTSKNFVDIEVLSPKRIPRVGRRQTLRIPSRGE

XP_038890792.1 uncharacterized protein LOC120080248 [Benincasa hispida]2.7e-3057.02Show/hide
Query:  VMPAENNARRHVVTPIDRYEFQVDDGNLVGRVNIHTRTCTCREFDVFQLSCSHAIAACIYQNVLYLDLCSPCYRVEAVLATYVEPIYPVGHVSEWKTSKN
        +  A N A +H V PID++EF+V DG L GRVNIH RTCTCR+FD +++SCSHAIAAC  +N+     CS  Y ++A+LA Y EPI P+GH  EWK S  
Subjt:  VMPAENNARRHVVTPIDRYEFQVDDGNLVGRVNIHTRTCTCREFDVFQLSCSHAIAACIYQNVLYLDLCSPCYRVEAVLATYVEPIYPVGHVSEWKTSKN

Query:  FVDIEVLSPKRIPR
        FVD+E L PKR+PR
Subjt:  FVDIEVLSPKRIPR

XP_038895917.1 uncharacterized protein LOC120084090 [Benincasa hispida]4.2e-3150.35Show/hide
Query:  STTTRASNSAV---MPAENNARRHVVTPIDRYEFQVDDGNLVGRVNIHTRTCTCREFDVFQLSCSHAIAACIYQNVLYLDLCSPCYRVEAVLATYVEPIY
        ++T+R S+ A+     A + A RH V PID++EF++ DG L GR NIHTR CTC +FD +++ CSH IAAC  QN+  + LCS  Y +E+VLA Y EPI 
Subjt:  STTTRASNSAV---MPAENNARRHVVTPIDRYEFQVDDGNLVGRVNIHTRTCTCREFDVFQLSCSHAIAACIYQNVLYLDLCSPCYRVEAVLATYVEPIY

Query:  PVGHVSEWKTSKNFVDIEVLSPKRIPRVGRRQTLRIPSRGE
          GH S WK S  F+++E L PKR+PR+GR +T R PS  E
Subjt:  PVGHVSEWKTSKNFVDIEVLSPKRIPRVGRRQTLRIPSRGE

XP_038904373.1 uncharacterized protein LOC120090731 [Benincasa hispida]1.2e-3055.56Show/hide
Query:  VMPAENNARRHVVTPIDRYEFQVDDGNLVGRVNIHTRTCTCREFDVFQLSCSHAIAACIYQNVLYLDLCSPCYRVEAVLATYVEPIYPVGHVSEWKTSKN
        ++ A + A R+ V PID+YEF+V +G L GRVNIHTRTCTCR+FD +++ CSHAIAAC  QN+    LCS  Y ++A+LA Y EP+  +GH  EWK S  
Subjt:  VMPAENNARRHVVTPIDRYEFQVDDGNLVGRVNIHTRTCTCREFDVFQLSCSHAIAACIYQNVLYLDLCSPCYRVEAVLATYVEPIYPVGHVSEWKTSKN

Query:  FVDIEVLSPKRIPRVGR
        FVD+E L PKR+ R+GR
Subjt:  FVDIEVLSPKRIPRVGR

TrEMBL top hitse value%identityAlignment
A0A6J1CVL4 uncharacterized protein LOC1110151815.0e-3051.08Show/hide
Query:  TTTRASNSAVMPAE--NNARRHVVTPIDRYEFQVDDGNLVGRVNIHTRTCTCREFDVFQLSCSHAIAACIYQNVLYLDLCSPCYRVEAVLATYVEPIYPV
        +TT +  +  M AE  N+ RRHVV  ID++ FQV D NL G V+++  TC CREFD F++ CSHAIAA   +N+    LC   Y   + +  Y EPI+PV
Subjt:  TTTRASNSAVMPAE--NNARRHVVTPIDRYEFQVDDGNLVGRVNIHTRTCTCREFDVFQLSCSHAIAACIYQNVLYLDLCSPCYRVEAVLATYVEPIYPV

Query:  GHVSEWKTSKNFVDIEVLSPKRIPRVGRRQTLRIPSRGE
        GHVS W +S  FV+I V  PK +PRVGRR+T RIPS GE
Subjt:  GHVSEWKTSKNFVDIEVLSPKRIPRVGRRQTLRIPSRGE

A0A6J1D4G8 uncharacterized protein LOC1110168891.0e-3053.66Show/hide
Query:  NNARRHVVTPIDRYEFQVDDGNLVGRVNIHTRTCTCREFDVFQLSCSHAIAACIYQNVLYLDLCSPCYRVEAVLATYVEPIYPVGHVSEWKTSKNFVDIE
        +NARRHVV  ID++  QV DGNL G V+ ++RTC+CREFD F++ CSHAIA  + +N+    LC   Y   + +  Y EPI+P+GHVS WK+S +FVD  
Subjt:  NNARRHVVTPIDRYEFQVDDGNLVGRVNIHTRTCTCREFDVFQLSCSHAIAACIYQNVLYLDLCSPCYRVEAVLATYVEPIYPVGHVSEWKTSKNFVDIE

Query:  VLSPKRIPRVGRRQTLRIPSRGE
        V +P  +PRVGRR+T+RIPS GE
Subjt:  VLSPKRIPRVGRRQTLRIPSRGE

A0A6J1DJT1 uncharacterized protein LOC1110207155.0e-3052.85Show/hide
Query:  NNARRHVVTPIDRYEFQVDDGNLVGRVNIHTRTCTCREFDVFQLSCSHAIAACIYQNVLYLDLCSPCYRVEAVLATYVEPIYPVGHVSEWKTSKNFVDIE
        +NARRHVV  ID++  QV DGNL G V+ ++RTC CREFD F++ CSHAIA  + +N+    LC   Y   + +  Y EPI+P+GHVS W +S +FVD  
Subjt:  NNARRHVVTPIDRYEFQVDDGNLVGRVNIHTRTCTCREFDVFQLSCSHAIAACIYQNVLYLDLCSPCYRVEAVLATYVEPIYPVGHVSEWKTSKNFVDIE

Query:  VLSPKRIPRVGRRQTLRIPSRGE
        V +P  +PRVGRR+T+RIPS GE
Subjt:  VLSPKRIPRVGRRQTLRIPSRGE

A0A6J1DQV1 uncharacterized protein LOC1110222991.7e-3047.18Show/hide
Query:  TTRAS------NSAVMPAENNARRHVVTPIDRYEFQVDDGNLVGRVNIHTRTCTCREFDVFQLSCSHAIAACIYQNVLYLDLCSPCYRVEAVLATYVEPI
        +TRAS         V  A   AR+H + PID YE++V DGN   RVN+++++CTC++FD +Q+ CSHA+ A +++NV    LCSP Y++E +L TY EPI
Subjt:  TTRAS------NSAVMPAENNARRHVVTPIDRYEFQVDDGNLVGRVNIHTRTCTCREFDVFQLSCSHAIAACIYQNVLYLDLCSPCYRVEAVLATYVEPI

Query:  YPVGHVSEWKTSKNFVDIEVLSPKRIPRVGRRQTLRIPSRGE
        YP+G   +W    +FV+  +  PK + RVGRRQT+RIPS GE
Subjt:  YPVGHVSEWKTSKNFVDIEVLSPKRIPRVGRRQTLRIPSRGE

A0A6J1DYC4 uncharacterized protein LOC1110256785.0e-3050.36Show/hide
Query:  TTTRASNSAVMPAE--NNARRHVVTPIDRYEFQVDDGNLVGRVNIHTRTCTCREFDVFQLSCSHAIAACIYQNVLYLDLCSPCYRVEAVLATYVEPIYPV
        +TT +  +  M AE  ++ARRHVV  ID++ FQV DGNL G V+++   C+CREFD F++ CSHAIAA   +N+    LC   Y   + +  Y EPI+PV
Subjt:  TTTRASNSAVMPAE--NNARRHVVTPIDRYEFQVDDGNLVGRVNIHTRTCTCREFDVFQLSCSHAIAACIYQNVLYLDLCSPCYRVEAVLATYVEPIYPV

Query:  GHVSEWKTSKNFVDIEVLSPKRIPRVGRRQTLRIPSRGE
        GH+S W +S  FV+I V  PK +PRVGRR+T+RIPS GE
Subjt:  GHVSEWKTSKNFVDIEVLSPKRIPRVGRRQTLRIPSRGE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49920.1 MuDR family transposase2.9e-0630.21Show/hide
Query:  VTPIDRYEFQV-------------DDGNLVGRVNIHTRTCTCREFDVFQLSCSHAIAACIYQNVLYLDLCSPCYRVEAVLATYVEPIYPVGHVSEW
        +TP++R  +QV              + +  G V ++  TCTC EF   +  C HA+A C    +  L     CY VE    TY     PV  +S W
Subjt:  VTPIDRYEFQV-------------DDGNLVGRVNIHTRTCTCREFDVFQLSCSHAIAACIYQNVLYLDLCSPCYRVEAVLATYVEPIYPVGHVSEW

AT1G64260.1 MuDR family transposase5.9e-0731.03Show/hide
Query:  HVVTPIDRYEFQVDDGNLVGR--VNIHTRTCTCREFDVFQLSCSHAIAACIYQNVLYLDLCSPCYRVEAVLATYVEPIYPVGHVSEW
        +V+T ++R  F+V + +      V ++  TCTCR+F  ++  C HA+A      +  L     CY VE    TY     PV  V+ W
Subjt:  HVVTPIDRYEFQVDDGNLVGR--VNIHTRTCTCREFDVFQLSCSHAIAACIYQNVLYLDLCSPCYRVEAVLATYVEPIYPVGHVSEW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATTTACACCCATTTATAATGAGCCAATGTCACTGAGTCCAATACGTGACGACGAGAGGGCATATAACCTTGGGGATGATGTTGACTACGTTACCACACATAATGA
TTTCCATGACTGGGGAGACTATGGAGATGATGTTAACCCGGACAGTGATTTTCAGGATTGGGGAGATTACGGAGAAGAGGAGCCGGGGACATATACAGATGGAGTACATG
AGAGTGGCGAGGAAGATCTGTACGAAGTTGATGTAACTGCCCAGGAGATGGAGGAGAACATCGGGATTCATCAGGAGGTACTTGGAACTGCAGAAAATGTCGATACTCCT
ACTATGGCCGTTAATATGGCACCTGGCCCTTCTACGACAACTCGTGCATCTAATTCAGCAGTAATGCCAGCGGAGAATAATGCTAGAAGGCATGTGGTTACGCCAATTGA
CAGGTACGAATTCCAAGTCGACGATGGAAACTTGGTTGGTCGCGTCAACATCCACACGAGGACGTGTACTTGTCGTGAATTTGACGTCTTCCAACTTTCGTGCTCCCATG
CAATCGCTGCCTGCATATACCAGAATGTGCTGTACTTGGATCTTTGTTCTCCATGCTACCGCGTTGAAGCAGTCCTTGCTACGTACGTAGAACCCATATATCCAGTAGGT
CATGTGTCGGAGTGGAAAACATCCAAAAATTTTGTGGATATTGAAGTTTTGTCGCCAAAGAGGATTCCAAGAGTTGGTCGACGACAAACCTTGAGGATACCATCCAGGGG
AGAGTCGCTGTGTTTTTTCCCGGCCCGAACTCGGCCGAAACGATGGATCGAGAACCTCAAACGAGACACTTGGGAGAGTCGATACGAGGAAGATCGTTTACTGTTTTTTT
CCCAGTTCTATCCCGACCGAAATCCTGGACCGAGATTCCCCAACGAGACGAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCATTTACACCCATTTATAATGAGCCAATGTCACTGAGTCCAATACGTGACGACGAGAGGGCATATAACCTTGGGGATGATGTTGACTACGTTACCACACATAATGA
TTTCCATGACTGGGGAGACTATGGAGATGATGTTAACCCGGACAGTGATTTTCAGGATTGGGGAGATTACGGAGAAGAGGAGCCGGGGACATATACAGATGGAGTACATG
AGAGTGGCGAGGAAGATCTGTACGAAGTTGATGTAACTGCCCAGGAGATGGAGGAGAACATCGGGATTCATCAGGAGGTACTTGGAACTGCAGAAAATGTCGATACTCCT
ACTATGGCCGTTAATATGGCACCTGGCCCTTCTACGACAACTCGTGCATCTAATTCAGCAGTAATGCCAGCGGAGAATAATGCTAGAAGGCATGTGGTTACGCCAATTGA
CAGGTACGAATTCCAAGTCGACGATGGAAACTTGGTTGGTCGCGTCAACATCCACACGAGGACGTGTACTTGTCGTGAATTTGACGTCTTCCAACTTTCGTGCTCCCATG
CAATCGCTGCCTGCATATACCAGAATGTGCTGTACTTGGATCTTTGTTCTCCATGCTACCGCGTTGAAGCAGTCCTTGCTACGTACGTAGAACCCATATATCCAGTAGGT
CATGTGTCGGAGTGGAAAACATCCAAAAATTTTGTGGATATTGAAGTTTTGTCGCCAAAGAGGATTCCAAGAGTTGGTCGACGACAAACCTTGAGGATACCATCCAGGGG
AGAGTCGCTGTGTTTTTTCCCGGCCCGAACTCGGCCGAAACGATGGATCGAGAACCTCAAACGAGACACTTGGGAGAGTCGATACGAGGAAGATCGTTTACTGTTTTTTT
CCCAGTTCTATCCCGACCGAAATCCTGGACCGAGATTCCCCAACGAGACGAGCTAG
Protein sequenceShow/hide protein sequence
MPFTPIYNEPMSLSPIRDDERAYNLGDDVDYVTTHNDFHDWGDYGDDVNPDSDFQDWGDYGEEEPGTYTDGVHESGEEDLYEVDVTAQEMEENIGIHQEVLGTAENVDTP
TMAVNMAPGPSTTTRASNSAVMPAENNARRHVVTPIDRYEFQVDDGNLVGRVNIHTRTCTCREFDVFQLSCSHAIAACIYQNVLYLDLCSPCYRVEAVLATYVEPIYPVG
HVSEWKTSKNFVDIEVLSPKRIPRVGRRQTLRIPSRGESLCFFPARTRPKRWIENLKRDTWESRYEEDRLLFFSQFYPDRNPGPRFPNETS