| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0032121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 2.3e-61 | 48.25 | Show/hide |
Query: MVVNTTLPKSSSKEKQQTNGTHH-------LTLKERQKKIYPFADADIPDMLEQLLEAQLIEIPTCKRPEEMEKVDDLKYCKYHRVIGHPVERCFILKDL
M+V T KS SK K+ + +H TL+ERQKK+YPF D+D+ DMLEQL+E QLI++P CKRPE++ KVDD YCKYHRVI H VE+CF+LK+L
Subjt: MVVNTTLPKSSSKEKQQTNGTHH-------LTLKERQKKIYPFADADIPDMLEQLLEAQLIEIPTCKRPEEMEKVDDLKYCKYHRVIGHPVERCFILKDL
Query: ILKLAKEGKIELDLDEVAQSNLATIKGKSK--------HQRKK-------DPKKLQPKRKRSKKFSQPQQ----------LVMLNKSFSKTFHKKEKENL
I KLA+E KIELD+DEVAQ+N + S QRK +P ++ ++K SQ ++ + L +SF + ++ E
Subjt: ILKLAKEGKIELDLDEVAQSNLATIKGKSK--------HQRKK-------DPKKLQPKRKRSKKFSQPQQ----------LVMLNKSFSKTFHKKEKENL
Query: A--TSYCIDV-------EEVDNSKKSEQRTSVFDRIRPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSGQSK
A T+ ++V EE+DNS + +QRTSVFD I+P TTR SVFQR+SMA +EENQC T + SAF+RLS+S SKK RPST FDRLK+T+ Q +
Subjt: A--TSYCIDV-------EEVDNSKKSEQRTSVFDRIRPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSGQSK
Query: RKMDNLEMKLFDEVNNDKKLQSSVSSRMKRTFSVLINTEGSL
R+M L+ K F E N+D K+ S V SRMKR SV INTEGSL
Subjt: RKMDNLEMKLFDEVNNDKKLQSSVSSRMKRTFSVLINTEGSL
|
|
| KAA0040811.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 9.4e-63 | 42.22 | Show/hide |
Query: MVVNTTLPKSSSKEKQQTNGTHH-------LTLKERQKKIYPFADADIPDMLEQLLEAQLIEIPTCKRPEEMEKVDDLKYCKYHRVIGHPVERCFILKDL
M+V T KS SK K++ + +H TL+ERQKK+YPF D+D+ DMLEQL+E QLI++P CKRPE+ KVDD YCKYHRVI H VE+CF+LK+L
Subjt: MVVNTTLPKSSSKEKQQTNGTHH-------LTLKERQKKIYPFADADIPDMLEQLLEAQLIEIPTCKRPEEMEKVDDLKYCKYHRVIGHPVERCFILKDL
Query: ILKLAKEGKIELDLDEVAQSN-------------------------------------------------------------------------------
ILKL +E KIELD+DEVAQ+N
Subjt: ILKLAKEGKIELDLDEVAQSN-------------------------------------------------------------------------------
Query: -----LATIKGKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTF---HKKEKENLATSYCIDV----------EEVDNSKKSEQRTSVFDRIR
I K K +R K K +P + + + F QP+Q + L + F ++F H KE + + + EEVDNS + +QRTSVFDRI+
Subjt: -----LATIKGKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTF---HKKEKENLATSYCIDV----------EEVDNSKKSEQRTSVFDRIR
Query: PPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSGQSKRKMDNLEMKLFDEVNNDKKLQSSVSSRMKRTFSVLIN
P TTR SVFQR+S+ EEENQC ST TR SAF+ LS+STSKK RPSTS FDRLK+ + Q +R+M +L++K F E N+D K+ S V SRMKR SV IN
Subjt: PPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSGQSKRKMDNLEMKLFDEVNNDKKLQSSVSSRMKRTFSVLIN
Query: TEGSL
TEGSL
Subjt: TEGSL
|
|
| KAA0056121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 2.5e-63 | 52.22 | Show/hide |
Query: MVVNTTLPKSSSKEKQQTNGTHH-------LTLKERQKKIYPFADADIPDMLEQLLEAQLIEIPTCKRPEEMEKVDDLKYCKYHRVIGHPVERCFILKDL
MVV+ T KS SK K+ H TLKERQ+K+YPF D+D+ DMLEQLLE QLI++P CKRPE+ KVDD YCKYHRVI HPVE+CF+LK+L
Subjt: MVVNTTLPKSSSKEKQQTNGTHH-------LTLKERQKKIYPFADADIPDMLEQLLEAQLIEIPTCKRPEEMEKVDDLKYCKYHRVIGHPVERCFILKDL
Query: ILKLAKEGKIELDLDEVAQSNLATIKGKSKHQRKKDPKKLQPKRK--------RSKKFSQPQQLVMLNKSFSKTFHKKEKENLATSYCIDVEEVDNSKKS
ILKLA+E KIELD+DEVAQ+N A I+ S + KD LQ +R RS P++++ + + + + + N +S +EV+NS +
Subjt: ILKLAKEGKIELDLDEVAQSNLATIKGKSKHQRKKDPKKLQPKRK--------RSKKFSQPQQLVMLNKSFSKTFHKKEKENLATSYCIDVEEVDNSKKS
Query: EQRTSVFDRIRPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSGQSKRKMDNLEMKLFDEVNNDKKLQSSVSS
QRTSVFDRI+P TTR SVFQR+S+A EEENQC TR S +RLS+ST KK RPSTS FDRLK+T+ Q +R+M + + K F E N+D K+ S V S
Subjt: EQRTSVFDRIRPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSGQSKRKMDNLEMKLFDEVNNDKKLQSSVSS
Query: RMKRTFSVLINTEGSL
RMKR V INTEGSL
Subjt: RMKRTFSVLINTEGSL
|
|
| KAA0065984.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.8e-61 | 51.58 | Show/hide |
Query: MVVNTTLPKSSSKEKQQTNGTHH-------LTLKERQKKIYPFADADIPDMLEQLLEAQLIEIPTCKRPEEMEKVDDLKYCKYHRVIGHPVERCFILKDL
MVV T KS SK K+ + +H TL+ERQKK+YPF D+D+ DMLEQL+E QLI++ CKRP + KVDD YCKYHRVI HPVE+CF+LK+L
Subjt: MVVNTTLPKSSSKEKQQTNGTHH-------LTLKERQKKIYPFADADIPDMLEQLLEAQLIEIPTCKRPEEMEKVDDLKYCKYHRVIGHPVERCFILKDL
Query: ILKLAKEGKIELDLDEVAQSNLATIKGKSKHQRKKDPKKLQPKRK--------RSKKFSQPQQLVMLNKSFSKTFHKKEKENLATSYCIDVEEVDNSKKS
ILKLA+E KI+LD+DE IKG KD LQP+R RS P++++ + + + E +N SY EEVDNS +
Subjt: ILKLAKEGKIELDLDEVAQSNLATIKGKSKHQRKKDPKKLQPKRK--------RSKKFSQPQQLVMLNKSFSKTFHKKEKENLATSYCIDVEEVDNSKKS
Query: EQRTSVFDRIRPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSGQSKRKMDNLEMKLFDEVNNDKKLQSSVSS
+QRTSVFDRI+P TTR VFQR+SMA EEENQC ST TR SAF+RLS+STSKK RPSTS FDRLK+ + Q +R+M +L+ K F E N+D K+ S + S
Subjt: EQRTSVFDRIRPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSGQSKRKMDNLEMKLFDEVNNDKKLQSSVSS
Query: RMKRTFSVLINTEGSL
R SV IN EGSL
Subjt: RMKRTFSVLINTEGSL
|
|
| TYK16519.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 5.1e-61 | 41.98 | Show/hide |
Query: MVVNTTLPKSSSKEKQQTNGTHH-------LTLKERQKKIYPFADADIPDMLEQLLEAQLIEIPTCKRPEEMEKVDDLKYCKYHRVIGHPVERCFILKDL
M V T KS SK K+ + +H TL+ERQKK+YPF ++D+ DMLEQL+E QLI++P CKR E++ KVDD YCKY+RVI HPVE+CF+LK+L
Subjt: MVVNTTLPKSSSKEKQQTNGTHH-------LTLKERQKKIYPFADADIPDMLEQLLEAQLIEIPTCKRPEEMEKVDDLKYCKYHRVIGHPVERCFILKDL
Query: ILKLAKEGKIELDLDEVAQSN-------------------------------------------------------------------------------
ILKLA+E KIELD+DEVAQ+N
Subjt: ILKLAKEGKIELDLDEVAQSN-------------------------------------------------------------------------------
Query: -----LATIKGKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTFHKKEKENLA------TSYCIDV-------EEVDNSKKSEQRTSVFDRIR
I K K +R K K +P + + + F QP++ + L + + F + E + T+ ++V EEVDNS + +QRTSVFDRI+
Subjt: -----LATIKGKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTFHKKEKENLA------TSYCIDV-------EEVDNSKKSEQRTSVFDRIR
Query: PPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSGQSKRKMDNLEMKLFDEVNNDKKLQSSVSSRMKRTFSVLIN
P TTR VFQR+SMA EEENQC ST R SAF+RLS+STSKK RPSTS FDRLK+T+ Q KR+M + + K F E N+D K+ S V SRMKR SV IN
Subjt: PPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSGQSKRKMDNLEMKLFDEVNNDKKLQSSVSSRMKRTFSVLIN
Query: TEGSL
TEGSL
Subjt: TEGSL
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SRE2 Ty3-gypsy retrotransposon protein | 1.1e-61 | 48.25 | Show/hide |
Query: MVVNTTLPKSSSKEKQQTNGTHH-------LTLKERQKKIYPFADADIPDMLEQLLEAQLIEIPTCKRPEEMEKVDDLKYCKYHRVIGHPVERCFILKDL
M+V T KS SK K+ + +H TL+ERQKK+YPF D+D+ DMLEQL+E QLI++P CKRPE++ KVDD YCKYHRVI H VE+CF+LK+L
Subjt: MVVNTTLPKSSSKEKQQTNGTHH-------LTLKERQKKIYPFADADIPDMLEQLLEAQLIEIPTCKRPEEMEKVDDLKYCKYHRVIGHPVERCFILKDL
Query: ILKLAKEGKIELDLDEVAQSNLATIKGKSK--------HQRKK-------DPKKLQPKRKRSKKFSQPQQ----------LVMLNKSFSKTFHKKEKENL
I KLA+E KIELD+DEVAQ+N + S QRK +P ++ ++K SQ ++ + L +SF + ++ E
Subjt: ILKLAKEGKIELDLDEVAQSNLATIKGKSK--------HQRKK-------DPKKLQPKRKRSKKFSQPQQ----------LVMLNKSFSKTFHKKEKENL
Query: A--TSYCIDV-------EEVDNSKKSEQRTSVFDRIRPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSGQSK
A T+ ++V EE+DNS + +QRTSVFD I+P TTR SVFQR+SMA +EENQC T + SAF+RLS+S SKK RPST FDRLK+T+ Q +
Subjt: A--TSYCIDV-------EEVDNSKKSEQRTSVFDRIRPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSGQSK
Query: RKMDNLEMKLFDEVNNDKKLQSSVSSRMKRTFSVLINTEGSL
R+M L+ K F E N+D K+ S V SRMKR SV INTEGSL
Subjt: RKMDNLEMKLFDEVNNDKKLQSSVSSRMKRTFSVLINTEGSL
|
|
| A0A5A7TGM1 Retrotransposon gag protein | 4.5e-63 | 42.22 | Show/hide |
Query: MVVNTTLPKSSSKEKQQTNGTHH-------LTLKERQKKIYPFADADIPDMLEQLLEAQLIEIPTCKRPEEMEKVDDLKYCKYHRVIGHPVERCFILKDL
M+V T KS SK K++ + +H TL+ERQKK+YPF D+D+ DMLEQL+E QLI++P CKRPE+ KVDD YCKYHRVI H VE+CF+LK+L
Subjt: MVVNTTLPKSSSKEKQQTNGTHH-------LTLKERQKKIYPFADADIPDMLEQLLEAQLIEIPTCKRPEEMEKVDDLKYCKYHRVIGHPVERCFILKDL
Query: ILKLAKEGKIELDLDEVAQSN-------------------------------------------------------------------------------
ILKL +E KIELD+DEVAQ+N
Subjt: ILKLAKEGKIELDLDEVAQSN-------------------------------------------------------------------------------
Query: -----LATIKGKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTF---HKKEKENLATSYCIDV----------EEVDNSKKSEQRTSVFDRIR
I K K +R K K +P + + + F QP+Q + L + F ++F H KE + + + EEVDNS + +QRTSVFDRI+
Subjt: -----LATIKGKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTF---HKKEKENLATSYCIDV----------EEVDNSKKSEQRTSVFDRIR
Query: PPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSGQSKRKMDNLEMKLFDEVNNDKKLQSSVSSRMKRTFSVLIN
P TTR SVFQR+S+ EEENQC ST TR SAF+ LS+STSKK RPSTS FDRLK+ + Q +R+M +L++K F E N+D K+ S V SRMKR SV IN
Subjt: PPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSGQSKRKMDNLEMKLFDEVNNDKKLQSSVSSRMKRTFSVLIN
Query: TEGSL
TEGSL
Subjt: TEGSL
|
|
| A0A5A7URH1 Ty3-gypsy retrotransposon protein | 1.2e-63 | 52.22 | Show/hide |
Query: MVVNTTLPKSSSKEKQQTNGTHH-------LTLKERQKKIYPFADADIPDMLEQLLEAQLIEIPTCKRPEEMEKVDDLKYCKYHRVIGHPVERCFILKDL
MVV+ T KS SK K+ H TLKERQ+K+YPF D+D+ DMLEQLLE QLI++P CKRPE+ KVDD YCKYHRVI HPVE+CF+LK+L
Subjt: MVVNTTLPKSSSKEKQQTNGTHH-------LTLKERQKKIYPFADADIPDMLEQLLEAQLIEIPTCKRPEEMEKVDDLKYCKYHRVIGHPVERCFILKDL
Query: ILKLAKEGKIELDLDEVAQSNLATIKGKSKHQRKKDPKKLQPKRK--------RSKKFSQPQQLVMLNKSFSKTFHKKEKENLATSYCIDVEEVDNSKKS
ILKLA+E KIELD+DEVAQ+N A I+ S + KD LQ +R RS P++++ + + + + + N +S +EV+NS +
Subjt: ILKLAKEGKIELDLDEVAQSNLATIKGKSKHQRKKDPKKLQPKRK--------RSKKFSQPQQLVMLNKSFSKTFHKKEKENLATSYCIDVEEVDNSKKS
Query: EQRTSVFDRIRPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSGQSKRKMDNLEMKLFDEVNNDKKLQSSVSS
QRTSVFDRI+P TTR SVFQR+S+A EEENQC TR S +RLS+ST KK RPSTS FDRLK+T+ Q +R+M + + K F E N+D K+ S V S
Subjt: EQRTSVFDRIRPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSGQSKRKMDNLEMKLFDEVNNDKKLQSSVSS
Query: RMKRTFSVLINTEGSL
RMKR V INTEGSL
Subjt: RMKRTFSVLINTEGSL
|
|
| A0A5A7VFA5 Ty3-gypsy retrotransposon protein | 8.5e-62 | 51.58 | Show/hide |
Query: MVVNTTLPKSSSKEKQQTNGTHH-------LTLKERQKKIYPFADADIPDMLEQLLEAQLIEIPTCKRPEEMEKVDDLKYCKYHRVIGHPVERCFILKDL
MVV T KS SK K+ + +H TL+ERQKK+YPF D+D+ DMLEQL+E QLI++ CKRP + KVDD YCKYHRVI HPVE+CF+LK+L
Subjt: MVVNTTLPKSSSKEKQQTNGTHH-------LTLKERQKKIYPFADADIPDMLEQLLEAQLIEIPTCKRPEEMEKVDDLKYCKYHRVIGHPVERCFILKDL
Query: ILKLAKEGKIELDLDEVAQSNLATIKGKSKHQRKKDPKKLQPKRK--------RSKKFSQPQQLVMLNKSFSKTFHKKEKENLATSYCIDVEEVDNSKKS
ILKLA+E KI+LD+DE IKG KD LQP+R RS P++++ + + + E +N SY EEVDNS +
Subjt: ILKLAKEGKIELDLDEVAQSNLATIKGKSKHQRKKDPKKLQPKRK--------RSKKFSQPQQLVMLNKSFSKTFHKKEKENLATSYCIDVEEVDNSKKS
Query: EQRTSVFDRIRPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSGQSKRKMDNLEMKLFDEVNNDKKLQSSVSS
+QRTSVFDRI+P TTR VFQR+SMA EEENQC ST TR SAF+RLS+STSKK RPSTS FDRLK+ + Q +R+M +L+ K F E N+D K+ S + S
Subjt: EQRTSVFDRIRPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSGQSKRKMDNLEMKLFDEVNNDKKLQSSVSS
Query: RMKRTFSVLINTEGSL
R SV IN EGSL
Subjt: RMKRTFSVLINTEGSL
|
|
| A0A5D3D209 Retrotransposon gag protein | 2.5e-61 | 41.98 | Show/hide |
Query: MVVNTTLPKSSSKEKQQTNGTHH-------LTLKERQKKIYPFADADIPDMLEQLLEAQLIEIPTCKRPEEMEKVDDLKYCKYHRVIGHPVERCFILKDL
M V T KS SK K+ + +H TL+ERQKK+YPF ++D+ DMLEQL+E QLI++P CKR E++ KVDD YCKY+RVI HPVE+CF+LK+L
Subjt: MVVNTTLPKSSSKEKQQTNGTHH-------LTLKERQKKIYPFADADIPDMLEQLLEAQLIEIPTCKRPEEMEKVDDLKYCKYHRVIGHPVERCFILKDL
Query: ILKLAKEGKIELDLDEVAQSN-------------------------------------------------------------------------------
ILKLA+E KIELD+DEVAQ+N
Subjt: ILKLAKEGKIELDLDEVAQSN-------------------------------------------------------------------------------
Query: -----LATIKGKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTFHKKEKENLA------TSYCIDV-------EEVDNSKKSEQRTSVFDRIR
I K K +R K K +P + + + F QP++ + L + + F + E + T+ ++V EEVDNS + +QRTSVFDRI+
Subjt: -----LATIKGKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTFHKKEKENLA------TSYCIDV-------EEVDNSKKSEQRTSVFDRIR
Query: PPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSGQSKRKMDNLEMKLFDEVNNDKKLQSSVSSRMKRTFSVLIN
P TTR VFQR+SMA EEENQC ST R SAF+RLS+STSKK RPSTS FDRLK+T+ Q KR+M + + K F E N+D K+ S V SRMKR SV IN
Subjt: PPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSGQSKRKMDNLEMKLFDEVNNDKKLQSSVSSRMKRTFSVLIN
Query: TEGSL
TEGSL
Subjt: TEGSL
|
|
