| GenBank top hits | e value | %identity | Alignment |
|---|
| GAU19483.1 hypothetical protein TSUD_77270 [Trifolium subterraneum] | 2.3e-125 | 40.65 | Show/hide |
Query: TIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPEIITQTTGGTVSNPTENAAGAEASSSTTSVVSNPLYEAWITTDQLLLGWLYNSMTSEVATQVM
++KLDR N+ LWK+L LP++R KL+G++LGT+ CP E IT SS +S N + W DQ LLGW+ NSMT+E+ATQ++
Subjt: TIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPEIITQTTGGTVSNPTENAAGAEASSSTTSVVSNPLYEAWITTDQLLLGWLYNSMTSEVATQVM
Query: GYNNAKDLWEAIQNLFGIQSRAEEDYLRQTFQQTRKGNTKMTDYLRLMKTHADNLGQAGSPVSSRNLISQVLLGLDEEYNPVVAMIHGRGDISWSEMQAE
+K LW+ Q+L G +R++ YL+ F RKG KM DYL MK D L AG+PVS+ +LI Q L GLD EYNPVV + + +SW ++QA+
Subjt: GYNNAKDLWEAIQNLFGIQSRAEEDYLRQTFQQTRKGNTKMTDYLRLMKTHADNLGQAGSPVSSRNLISQVLLGLDEEYNPVVAMIHGRGDISWSEMQAE
Query: LLVFEKRLELQTAQKTSVSFSHNTSVNMASKGLTNPPNNHNRGWNVNPNNQRGQNPNNPQRGGSNFNGNRGRGGRGRGYGNYGSNYGNSNRPICQVCGRP
LL FE R+E Q T+++ N + N+A N ++ RG++ NN RG N RGGRGR G S + CQVCG
Subjt: LLVFEKRLELQTAQKTSVSFSHNTSVNMASKGLTNPPNNHNRGWNVNPNNQRGQNPNNPQRGGSNFNGNRGRGGRGRGYGNYGSNYGNSNRPICQVCGRP
Query: GHLALTCYHRFDKEFSPNQNRNGNFNISNNQSNSGNYVGNTNYAGSSVPATTFVANSGNPFLANPETVIDSNWYVDSGASSHVTGDYNNLVNPREYGGNE
H+A+ C+HRFDK +S + + G+ S N FLA+ +V D +WY DSGAS+HVT + E+ G
Subjt: GHLALTCYHRFDKEFSPNQNRNGNFNISNNQSNSGNYVGNTNYAGSSVPATTFVANSGNPFLANPETVIDSNWYVDSGASSHVTGDYNNLVNPREYGGNE
Query: QVIIGNGTKLPISFTGSTYLTDGSHVLSLENTLLVPDIAKNLVSVSRLTQDNNLYFEFHGNFCLLKDKASGRVLLKGILRDGLYQLESVQT-----LSSS
+++GNG KL I TGS+ L L+L + L VP+I KNL+SVS+L DNN+ EF N C +KDK +G+V+LKG+L+DGLYQL + +S
Subjt: QVIIGNGTKLPISFTGSTYLTDGSHVLSLENTLLVPDIAKNLVSVSRLTQDNNLYFEFHGNFCLLKDKASGRVLLKGILRDGLYQLESVQT-----LSSS
Query: PSLFRRLGHPASKVLDFVIRECNLPVKRNEALQFCSSCQFGKAHNLPFPLSNSHAQKPFDLIHSDLWGPTPVQSPDGFRFYILFLDDHSRFTWLYPLKQK
S RRLGHP +KVLD V+ C + V ++ FC +CQ+GK H LPF S+SHAQ+P +L+H+D+WGP P+ + GF++Y+ F+DD SRFTW+YPLKQK
Subjt: PSLFRRLGHPASKVLDFVIRECNLPVKRNEALQFCSSCQFGKAHNLPFPLSNSHAQKPFDLIHSDLWGPTPVQSPDGFRFYILFLDDHSRFTWLYPLKQK
Query: NDAFSAFKHFIQLVQTQFNSRIKAFQSDNGREFVHIHRECYRLGQAF
++ AF F L + QFN RIK Q D G E+ + + G F
Subjt: NDAFSAFKHFIQLVQTQFNSRIKAFQSDNGREFVHIHRECYRLGQAF
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| PNX76291.1 gag/pol polyprotein - maize retrotransposon Hopscotch, partial [Trifolium pratense] | 4.3e-124 | 40.71 | Show/hide |
Query: LNQITTIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPEIITQTTGGTVSNPTENAAGAEASSSTTSVVSNPLYEAWITTDQLLLGWLYNSMTSEV
L ++KLDR N+ LW+++ LPI+R +L+G++LG K CP E IT ++ +S NP +E W DQ LLGWL NSMT +
Subjt: LNQITTIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPEIITQTTGGTVSNPTENAAGAEASSSTTSVVSNPLYEAWITTDQLLLGWLYNSMTSEV
Query: ATQVMGYNNAKDLWEAIQNLFGIQSRAEEDYLRQTFQQTRKGNTKMTDYLRLMKTHADNLGQAGSPVSSRNLISQVLLGLDEEYNPVVAMIHGRGDISWS
ATQ++ + LW+ Q+L G +R++ YL+ F TRKG KM DYL MK AD L AG+P+S+ +LI Q L GLD EYNPVV + + +SW
Subjt: ATQVMGYNNAKDLWEAIQNLFGIQSRAEEDYLRQTFQQTRKGNTKMTDYLRLMKTHADNLGQAGSPVSSRNLISQVLLGLDEEYNPVVAMIHGRGDISWS
Query: EMQAELLVFEKRLELQTAQKTSVSFSHNTSVNMASKGLTNPPNNHNRGWNVNPNNQ-RGQNPNNPQRGGSNFNGNRGRGGRGRGYGNYGSNYGNSNRPIC
++QA+LL FE R+E Q T+++ N + N+A K + +RG N NN RG N N GSNF G RG GRGR + + C
Subjt: EMQAELLVFEKRLELQTAQKTSVSFSHNTSVNMASKGLTNPPNNHNRGWNVNPNNQ-RGQNPNNPQRGGSNFNGNRGRGGRGRGYGNYGSNYGNSNRPIC
Query: QVCGRPGHLALTCYHRFDKEFSPNQNRNGNFNISNNQSNSGNYVGNTNYAGSSVPATTFVANSGNPFLANPETVIDSNWYVDSGASSHVTGDYNNLVNPR
QVCG H+A+ C++RFDK +S + N S N G++ N FLA+ ++ D +WY DSGAS+HVT + N
Subjt: QVCGRPGHLALTCYHRFDKEFSPNQNRNGNFNISNNQSNSGNYVGNTNYAGSSVPATTFVANSGNPFLANPETVIDSNWYVDSGASSHVTGDYNNLVNPR
Query: EYGGNEQVIIGNGTKLPISFTGSTYLTDGSHVLSLENTLLVPDIAKNLVSVSRLTQDNNLYFEFHGNFCLLKDKASGRVLLKGILRDGLYQL---ESVQT
E+ G +I+GNG KL I TGS+ L L+L + L VP I KNL+SVS+L DNN+ EF N C +KDK +G+ +L+GIL+DGLYQL +S
Subjt: EYGGNEQVIIGNGTKLPISFTGSTYLTDGSHVLSLENTLLVPDIAKNLVSVSRLTQDNNLYFEFHGNFCLLKDKASGRVLLKGILRDGLYQL---ESVQT
Query: LSSSPSLFRRLGHPASKVLDFVIRECNLPVKRNEALQFCSSCQFGKAHNLPFPLSNSHAQKPFDLIHSDLWGPTPVQSPDGFRFYILFLDDHSRFTWLYP
+S S R+LGHP +KVLD V++ CN+ + ++ FC +CQ+GK H LPF S SHA++ +L+H+D+WGP P+ S GF++Y+ F+DD +RFTW+YP
Subjt: LSSSPSLFRRLGHPASKVLDFVIRECNLPVKRNEALQFCSSCQFGKAHNLPFPLSNSHAQKPFDLIHSDLWGPTPVQSPDGFRFYILFLDDHSRFTWLYP
Query: LKQKNDAFSAFKHFIQLVQTQFNSRIKAFQSDNGREFVHIHRECYRLGQAF
LKQK+D AF F +V+ QF+ +IK Q D G E+ + + G F
Subjt: LKQKNDAFSAFKHFIQLVQTQFNSRIKAFQSDNGREFVHIHRECYRLGQAF
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| PNX78574.1 retrovirus-related Pol polyprotein from transposon TNT 1-94 [Trifolium pratense] | 7.6e-121 | 39.85 | Show/hide |
Query: NQLLNQITTIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPEIITQTTGGTVSNPTENAAGAEASSSTTSVVSNPLYEAWITTDQLLLGWLYNSMT
N L ++I ++ LDR NF LWK+L LPI+R +L+G++LGTK CP + IT AEAS NP + W DQ +LGWL N+MT
Subjt: NQLLNQITTIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPEIITQTTGGTVSNPTENAAGAEASSSTTSVVSNPLYEAWITTDQLLLGWLYNSMT
Query: SEVATQVMGYNNAKDLWEAIQNLFGIQSRAEEDYLRQTFQQTRKGNTKMTDYLRLMKTHADNLGQAGSPVSSRNLISQVLLGLDEEYNPVVAMIHGRGDI
+ A+Q++ +K LWE Q+L +R+ YLR F TRKG KM DYL MK AD L AGSP+++ +LI Q L GLD +YNP+V + + ++
Subjt: SEVATQVMGYNNAKDLWEAIQNLFGIQSRAEEDYLRQTFQQTRKGNTKMTDYLRLMKTHADNLGQAGSPVSSRNLISQVLLGLDEEYNPVVAMIHGRGDI
Query: SWSEMQAELLVFEKRLELQTAQKTSVSFSHNTSVNMASKG-LTNPPNNHNRGWNVNPNNQRGQNPNNPQRGGSNFNGNRGRGGRGRGYGNYGSNYGNSNR
SW ++QA+LL FE RL+ + + + N + N+A+K NH W GS+F RG G+GR +
Subjt: SWSEMQAELLVFEKRLELQTAQKTSVSFSHNTSVNMASKG-LTNPPNNHNRGWNVNPNNQRGQNPNNPQRGGSNFNGNRGRGGRGRGYGNYGSNYGNSNR
Query: PICQVCGRPGHLALTCYHRFDKEFSPNQNRNGNFNISNNQSNSGNYVGNTNYAGSSVPATTFVANSGNPFLANPETVIDSNWYVDSGASSHVTGDYNNLV
ICQVC + GH A+ C HR+DK ++ + N N N FLA+ D WY DSGAS+HVT +
Subjt: PICQVCGRPGHLALTCYHRFDKEFSPNQNRNGNFNISNNQSNSGNYVGNTNYAGSSVPATTFVANSGNPFLANPETVIDSNWYVDSGASSHVTGDYNNLV
Query: NPREYGGNEQVIIGNGTKLPISFTGSTYLTDGSHVLSLENTLLVPDIAKNLVSVSRLTQDNNLYFEFHGNFCLLKDKASGRVLLKGILRDGLYQLE--SV
E G +I+GNG KL I +GS+ L + L+L + L VP I KNL+SVS+LT DNN+ EF + C +KDK +G+VLL+GIL+DGLYQL S
Subjt: NPREYGGNEQVIIGNGTKLPISFTGSTYLTDGSHVLSLENTLLVPDIAKNLVSVSRLTQDNNLYFEFHGNFCLLKDKASGRVLLKGILRDGLYQLE--SV
Query: QT-------LSSSPSLFRRLGHPASKVLDFVIRECNLPVKRNEALQFCSSCQFGKAHNLPFPLSNSHAQKPFDLIHSDLWGPTPVQSPDGFRFYILFLDD
QT LS S R+LGHP++ VLD V++ CN+ ++ +FC +CQ GK+H LPF S+SHAQ+ +LIH+D+WGP P+ S GF++Y+ F+DD
Subjt: QT-------LSSSPSLFRRLGHPASKVLDFVIRECNLPVKRNEALQFCSSCQFGKAHNLPFPLSNSHAQKPFDLIHSDLWGPTPVQSPDGFRFYILFLDD
Query: HSRFTWLYPLKQKNDAFSAFKHFIQLVQTQFNSRIKAFQSDNGREFVHIHRECYRLGQAF
SRFTW+YPLKQK+D AF F +V+ QFN RIK Q D G EF + + G F
Subjt: HSRFTWLYPLKQKNDAFSAFKHFIQLVQTQFNSRIKAFQSDNGREFVHIHRECYRLGQAF
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| PNX94503.1 putative retrotransposon Ty1-copia subclass protein, partial [Trifolium pratense] | 5.8e-121 | 40.43 | Show/hide |
Query: LNQITTIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPEIITQTTGGTVSNPTENAAGAEASSSTTSVVSNPLYEAWITTDQLLLGWLYNSMTSEV
L ++KLDR NF LWK+L LP++R K +G++LGTK CP + +T S T + NP Y+ W DQ LLGWL NSMT ++
Subjt: LNQITTIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPEIITQTTGGTVSNPTENAAGAEASSSTTSVVSNPLYEAWITTDQLLLGWLYNSMTSEV
Query: ATQVMGYNNAKDLWEAIQNLFGIQSRAEEDYLRQTFQQTRKGNTKMTDYLRLMKTHADNLGQAGSPVSSRNLISQVLLGLDEEYNPVVAMIHGRGDISWS
ATQV+ +K LW+ Q+L G +R+ YL+ F T K KM YL MK AD L AGSP+SS +L+ Q L GLD EYNPVV + + +ISW
Subjt: ATQVMGYNNAKDLWEAIQNLFGIQSRAEEDYLRQTFQQTRKGNTKMTDYLRLMKTHADNLGQAGSPVSSRNLISQVLLGLDEEYNPVVAMIHGRGDISWS
Query: EMQAELLVFEKRLELQTAQKTSVSFSHNTSVNMASKGLTNPPNNHNRGWNVNPNNQRGQNPNNPQRGGSNFNGNRGRGGRGRGYGNYGSNYGNSNRPICQ
+ QA+LL FE RL+ Q +++ N S N ASK N+ G N + G N RGGRGR + RPICQ
Subjt: EMQAELLVFEKRLELQTAQKTSVSFSHNTSVNMASKGLTNPPNNHNRGWNVNPNNQRGQNPNNPQRGGSNFNGNRGRGGRGRGYGNYGSNYGNSNRPICQ
Query: VCGRPGHLALTCYHRFDKEFSPNQNRNGNFNISNNQSNSGNYVGNTNYAGSSVPATTFVANSGNPFLANPETVIDSNWYVDSGASSHVTGDYNNLVNPRE
+CG+ GH A CY+RFDK +Y +YA S + F+A+P D WY DSGAS+HVT L + E
Subjt: VCGRPGHLALTCYHRFDKEFSPNQNRNGNFNISNNQSNSGNYVGNTNYAGSSVPATTFVANSGNPFLANPETVIDSNWYVDSGASSHVTGDYNNLVNPRE
Query: YGGNEQVIIGNGTKLPISFTGSTYLTDGSHVLSLENTLLVPDIAKNLVSVSRLTQDNNLYFEFHGNFCLLKDKASGRVLLKGILRDGLYQLESVQT----
G +++GNG KL I +GST L D ++L N L VP+I KNL+SVS+LT DNN EF N+C +KDK +G+ LLKG L+DGLYQL + +
Subjt: YGGNEQVIIGNGTKLPISFTGSTYLTDGSHVLSLENTLLVPDIAKNLVSVSRLTQDNNLYFEFHGNFCLLKDKASGRVLLKGILRDGLYQLESVQT----
Query: ------LSSSPSLFRRLGHPASKVLDFVIRECNLPVKRNEALQFCSSCQFGKAHNLPFPLSNSHAQKPFDLIHSDLWGPTPVQSPDGFRFYILFLDDHSR
+S R+LGHP +KVL+ V+++ N+ + ++ FC +CQFGK H LPF S+SHA++P DLIH+D+WGP P+ S F++Y+ FLDD SR
Subjt: ------LSSSPSLFRRLGHPASKVLDFVIRECNLPVKRNEALQFCSSCQFGKAHNLPFPLSNSHAQKPFDLIHSDLWGPTPVQSPDGFRFYILFLDDHSR
Query: FTWLYPLKQKNDAFSAFKHFIQLVQTQFNSRIKAFQSDNGREFVHIHR
FTW++PLKQK++ AF F LV+ QFN +IK + D G E+ + +
Subjt: FTWLYPLKQKNDAFSAFKHFIQLVQTQFNSRIKAFQSDNGREFVHIHR
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| PNY01489.1 copia-like polyprotein, partial [Trifolium pratense] | 1.7e-120 | 39.27 | Show/hide |
Query: LNQITTIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPEIITQTTGGTVSNPTENAAGAEASSSTTSVVSNPLYEAWITTDQLLLGWLYNSMTSEV
L I ++KLDR N+ LWK+L LP++R K +G++LGTK CP + +T S+ S NP ++ W+ DQ LLGWL NSM ++
Subjt: LNQITTIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPEIITQTTGGTVSNPTENAAGAEASSSTTSVVSNPLYEAWITTDQLLLGWLYNSMTSEV
Query: ATQVMGYNNAKDLWEAIQNLFGIQSRAEEDYLRQTFQQTRKGNTKMTDYLRLMKTHADNLGQAGSPVSSRNLISQVLLGLDEEYNPVVAMIHGRGDISWS
ATQ++ +K LW+ Q+L G +++ YL+ F TRKG KM +YL MK +D L +GSP+S+ +L+ Q L GLD EYNPVV + + ++SW
Subjt: ATQVMGYNNAKDLWEAIQNLFGIQSRAEEDYLRQTFQQTRKGNTKMTDYLRLMKTHADNLGQAGSPVSSRNLISQVLLGLDEEYNPVVAMIHGRGDISWS
Query: EMQAELLVFEKRLELQTAQKTSVS-FSHNTSVNMASKGLTNPPNNHNRGWNVNPNNQRGQNPNNPQRGGSNFNGNRGRGGRGRGYGNYGSNYGNSNRPIC
++QA+LL FE RL+ Q + S + N S N A+K H+RG N +R SNF G RG G+GR + C
Subjt: EMQAELLVFEKRLELQTAQKTSVS-FSHNTSVNMASKGLTNPPNNHNRGWNVNPNNQRGQNPNNPQRGGSNFNGNRGRGGRGRGYGNYGSNYGNSNRPIC
Query: QVCGRPGHLALTCYHRFDKEFSPNQNRNGNFNISNNQSNSGNYVGNTNYAGSSVPATTFVANSGNPFLANPETVIDSNWYVDSGASSHVTGDYNNLVNPR
QVC GH A+ C +RFD+ ++ N S G++ + F+A+P D WY DSGAS+HVT +
Subjt: QVCGRPGHLALTCYHRFDKEFSPNQNRNGNFNISNNQSNSGNYVGNTNYAGSSVPATTFVANSGNPFLANPETVIDSNWYVDSGASSHVTGDYNNLVNPR
Query: EYGGNEQVIIGNGTKLPISFTGSTYLTDGSHVLSLENTLLVPDIAKNLVSVSRLTQDNNLYFEFHGNFCLLKDKASGRVLLKGILRDGLYQLESVQT---
E+ G +++GNG KL I +GST L + L+L + L VP I KNL+SVS+LT DNN++ EF N C +KDK +G+ LLKG L+DGLYQL V
Subjt: EYGGNEQVIIGNGTKLPISFTGSTYLTDGSHVLSLENTLLVPDIAKNLVSVSRLTQDNNLYFEFHGNFCLLKDKASGRVLLKGILRDGLYQLESVQT---
Query: ------LSSSPSLFRRLGHPASKVLDFVIRECNLPVKRNEALQFCSSCQFGKAHNLPFPLSNSHAQKPFDLIHSDLWGPTPVQSPDGFRFYILFLDDHSR
+S S R+LGHP +KVL+ V+++CN+ + ++ FC +CQFGK H LPF S+SH Q+P LIHSD+WGP P+ SP GF++Y+ F+DD SR
Subjt: ------LSSSPSLFRRLGHPASKVLDFVIRECNLPVKRNEALQFCSSCQFGKAHNLPFPLSNSHAQKPFDLIHSDLWGPTPVQSPDGFRFYILFLDDHSR
Query: FTWLYPLKQKNDAFSAFKHFIQLVQTQFNSRIKAFQSDNGREFVHIHRECYRLGQAF
FTW++PLKQK+D AF F L + QFN +IK Q D G E+ + + G F
Subjt: FTWLYPLKQKNDAFSAFKHFIQLVQTQFNSRIKAFQSDNGREFVHIHRECYRLGQAF
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2K3LCM1 Gag/pol polyprotein-maize retrotransposon Hopscotch (Fragment) | 2.1e-124 | 40.71 | Show/hide |
Query: LNQITTIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPEIITQTTGGTVSNPTENAAGAEASSSTTSVVSNPLYEAWITTDQLLLGWLYNSMTSEV
L ++KLDR N+ LW+++ LPI+R +L+G++LG K CP E IT ++ +S NP +E W DQ LLGWL NSMT +
Subjt: LNQITTIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPEIITQTTGGTVSNPTENAAGAEASSSTTSVVSNPLYEAWITTDQLLLGWLYNSMTSEV
Query: ATQVMGYNNAKDLWEAIQNLFGIQSRAEEDYLRQTFQQTRKGNTKMTDYLRLMKTHADNLGQAGSPVSSRNLISQVLLGLDEEYNPVVAMIHGRGDISWS
ATQ++ + LW+ Q+L G +R++ YL+ F TRKG KM DYL MK AD L AG+P+S+ +LI Q L GLD EYNPVV + + +SW
Subjt: ATQVMGYNNAKDLWEAIQNLFGIQSRAEEDYLRQTFQQTRKGNTKMTDYLRLMKTHADNLGQAGSPVSSRNLISQVLLGLDEEYNPVVAMIHGRGDISWS
Query: EMQAELLVFEKRLELQTAQKTSVSFSHNTSVNMASKGLTNPPNNHNRGWNVNPNNQ-RGQNPNNPQRGGSNFNGNRGRGGRGRGYGNYGSNYGNSNRPIC
++QA+LL FE R+E Q T+++ N + N+A K + +RG N NN RG N N GSNF G RG GRGR + + C
Subjt: EMQAELLVFEKRLELQTAQKTSVSFSHNTSVNMASKGLTNPPNNHNRGWNVNPNNQ-RGQNPNNPQRGGSNFNGNRGRGGRGRGYGNYGSNYGNSNRPIC
Query: QVCGRPGHLALTCYHRFDKEFSPNQNRNGNFNISNNQSNSGNYVGNTNYAGSSVPATTFVANSGNPFLANPETVIDSNWYVDSGASSHVTGDYNNLVNPR
QVCG H+A+ C++RFDK +S + N S N G++ N FLA+ ++ D +WY DSGAS+HVT + N
Subjt: QVCGRPGHLALTCYHRFDKEFSPNQNRNGNFNISNNQSNSGNYVGNTNYAGSSVPATTFVANSGNPFLANPETVIDSNWYVDSGASSHVTGDYNNLVNPR
Query: EYGGNEQVIIGNGTKLPISFTGSTYLTDGSHVLSLENTLLVPDIAKNLVSVSRLTQDNNLYFEFHGNFCLLKDKASGRVLLKGILRDGLYQL---ESVQT
E+ G +I+GNG KL I TGS+ L L+L + L VP I KNL+SVS+L DNN+ EF N C +KDK +G+ +L+GIL+DGLYQL +S
Subjt: EYGGNEQVIIGNGTKLPISFTGSTYLTDGSHVLSLENTLLVPDIAKNLVSVSRLTQDNNLYFEFHGNFCLLKDKASGRVLLKGILRDGLYQL---ESVQT
Query: LSSSPSLFRRLGHPASKVLDFVIRECNLPVKRNEALQFCSSCQFGKAHNLPFPLSNSHAQKPFDLIHSDLWGPTPVQSPDGFRFYILFLDDHSRFTWLYP
+S S R+LGHP +KVLD V++ CN+ + ++ FC +CQ+GK H LPF S SHA++ +L+H+D+WGP P+ S GF++Y+ F+DD +RFTW+YP
Subjt: LSSSPSLFRRLGHPASKVLDFVIRECNLPVKRNEALQFCSSCQFGKAHNLPFPLSNSHAQKPFDLIHSDLWGPTPVQSPDGFRFYILFLDDHSRFTWLYP
Query: LKQKNDAFSAFKHFIQLVQTQFNSRIKAFQSDNGREFVHIHRECYRLGQAF
LKQK+D AF F +V+ QF+ +IK Q D G E+ + + G F
Subjt: LKQKNDAFSAFKHFIQLVQTQFNSRIKAFQSDNGREFVHIHRECYRLGQAF
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| A0A2K3LJ49 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.7e-121 | 39.85 | Show/hide |
Query: NQLLNQITTIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPEIITQTTGGTVSNPTENAAGAEASSSTTSVVSNPLYEAWITTDQLLLGWLYNSMT
N L ++I ++ LDR NF LWK+L LPI+R +L+G++LGTK CP + IT AEAS NP + W DQ +LGWL N+MT
Subjt: NQLLNQITTIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPEIITQTTGGTVSNPTENAAGAEASSSTTSVVSNPLYEAWITTDQLLLGWLYNSMT
Query: SEVATQVMGYNNAKDLWEAIQNLFGIQSRAEEDYLRQTFQQTRKGNTKMTDYLRLMKTHADNLGQAGSPVSSRNLISQVLLGLDEEYNPVVAMIHGRGDI
+ A+Q++ +K LWE Q+L +R+ YLR F TRKG KM DYL MK AD L AGSP+++ +LI Q L GLD +YNP+V + + ++
Subjt: SEVATQVMGYNNAKDLWEAIQNLFGIQSRAEEDYLRQTFQQTRKGNTKMTDYLRLMKTHADNLGQAGSPVSSRNLISQVLLGLDEEYNPVVAMIHGRGDI
Query: SWSEMQAELLVFEKRLELQTAQKTSVSFSHNTSVNMASKG-LTNPPNNHNRGWNVNPNNQRGQNPNNPQRGGSNFNGNRGRGGRGRGYGNYGSNYGNSNR
SW ++QA+LL FE RL+ + + + N + N+A+K NH W GS+F RG G+GR +
Subjt: SWSEMQAELLVFEKRLELQTAQKTSVSFSHNTSVNMASKG-LTNPPNNHNRGWNVNPNNQRGQNPNNPQRGGSNFNGNRGRGGRGRGYGNYGSNYGNSNR
Query: PICQVCGRPGHLALTCYHRFDKEFSPNQNRNGNFNISNNQSNSGNYVGNTNYAGSSVPATTFVANSGNPFLANPETVIDSNWYVDSGASSHVTGDYNNLV
ICQVC + GH A+ C HR+DK ++ + N N N FLA+ D WY DSGAS+HVT +
Subjt: PICQVCGRPGHLALTCYHRFDKEFSPNQNRNGNFNISNNQSNSGNYVGNTNYAGSSVPATTFVANSGNPFLANPETVIDSNWYVDSGASSHVTGDYNNLV
Query: NPREYGGNEQVIIGNGTKLPISFTGSTYLTDGSHVLSLENTLLVPDIAKNLVSVSRLTQDNNLYFEFHGNFCLLKDKASGRVLLKGILRDGLYQLE--SV
E G +I+GNG KL I +GS+ L + L+L + L VP I KNL+SVS+LT DNN+ EF + C +KDK +G+VLL+GIL+DGLYQL S
Subjt: NPREYGGNEQVIIGNGTKLPISFTGSTYLTDGSHVLSLENTLLVPDIAKNLVSVSRLTQDNNLYFEFHGNFCLLKDKASGRVLLKGILRDGLYQLE--SV
Query: QT-------LSSSPSLFRRLGHPASKVLDFVIRECNLPVKRNEALQFCSSCQFGKAHNLPFPLSNSHAQKPFDLIHSDLWGPTPVQSPDGFRFYILFLDD
QT LS S R+LGHP++ VLD V++ CN+ ++ +FC +CQ GK+H LPF S+SHAQ+ +LIH+D+WGP P+ S GF++Y+ F+DD
Subjt: QT-------LSSSPSLFRRLGHPASKVLDFVIRECNLPVKRNEALQFCSSCQFGKAHNLPFPLSNSHAQKPFDLIHSDLWGPTPVQSPDGFRFYILFLDD
Query: HSRFTWLYPLKQKNDAFSAFKHFIQLVQTQFNSRIKAFQSDNGREFVHIHRECYRLGQAF
SRFTW+YPLKQK+D AF F +V+ QFN RIK Q D G EF + + G F
Subjt: HSRFTWLYPLKQKNDAFSAFKHFIQLVQTQFNSRIKAFQSDNGREFVHIHRECYRLGQAF
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| A0A2K3MUJ9 Putative retrotransposon Ty1-copia subclass protein (Fragment) | 2.8e-121 | 40.43 | Show/hide |
Query: LNQITTIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPEIITQTTGGTVSNPTENAAGAEASSSTTSVVSNPLYEAWITTDQLLLGWLYNSMTSEV
L ++KLDR NF LWK+L LP++R K +G++LGTK CP + +T S T + NP Y+ W DQ LLGWL NSMT ++
Subjt: LNQITTIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPEIITQTTGGTVSNPTENAAGAEASSSTTSVVSNPLYEAWITTDQLLLGWLYNSMTSEV
Query: ATQVMGYNNAKDLWEAIQNLFGIQSRAEEDYLRQTFQQTRKGNTKMTDYLRLMKTHADNLGQAGSPVSSRNLISQVLLGLDEEYNPVVAMIHGRGDISWS
ATQV+ +K LW+ Q+L G +R+ YL+ F T K KM YL MK AD L AGSP+SS +L+ Q L GLD EYNPVV + + +ISW
Subjt: ATQVMGYNNAKDLWEAIQNLFGIQSRAEEDYLRQTFQQTRKGNTKMTDYLRLMKTHADNLGQAGSPVSSRNLISQVLLGLDEEYNPVVAMIHGRGDISWS
Query: EMQAELLVFEKRLELQTAQKTSVSFSHNTSVNMASKGLTNPPNNHNRGWNVNPNNQRGQNPNNPQRGGSNFNGNRGRGGRGRGYGNYGSNYGNSNRPICQ
+ QA+LL FE RL+ Q +++ N S N ASK N+ G N + G N RGGRGR + RPICQ
Subjt: EMQAELLVFEKRLELQTAQKTSVSFSHNTSVNMASKGLTNPPNNHNRGWNVNPNNQRGQNPNNPQRGGSNFNGNRGRGGRGRGYGNYGSNYGNSNRPICQ
Query: VCGRPGHLALTCYHRFDKEFSPNQNRNGNFNISNNQSNSGNYVGNTNYAGSSVPATTFVANSGNPFLANPETVIDSNWYVDSGASSHVTGDYNNLVNPRE
+CG+ GH A CY+RFDK +Y +YA S + F+A+P D WY DSGAS+HVT L + E
Subjt: VCGRPGHLALTCYHRFDKEFSPNQNRNGNFNISNNQSNSGNYVGNTNYAGSSVPATTFVANSGNPFLANPETVIDSNWYVDSGASSHVTGDYNNLVNPRE
Query: YGGNEQVIIGNGTKLPISFTGSTYLTDGSHVLSLENTLLVPDIAKNLVSVSRLTQDNNLYFEFHGNFCLLKDKASGRVLLKGILRDGLYQLESVQT----
G +++GNG KL I +GST L D ++L N L VP+I KNL+SVS+LT DNN EF N+C +KDK +G+ LLKG L+DGLYQL + +
Subjt: YGGNEQVIIGNGTKLPISFTGSTYLTDGSHVLSLENTLLVPDIAKNLVSVSRLTQDNNLYFEFHGNFCLLKDKASGRVLLKGILRDGLYQLESVQT----
Query: ------LSSSPSLFRRLGHPASKVLDFVIRECNLPVKRNEALQFCSSCQFGKAHNLPFPLSNSHAQKPFDLIHSDLWGPTPVQSPDGFRFYILFLDDHSR
+S R+LGHP +KVL+ V+++ N+ + ++ FC +CQFGK H LPF S+SHA++P DLIH+D+WGP P+ S F++Y+ FLDD SR
Subjt: ------LSSSPSLFRRLGHPASKVLDFVIRECNLPVKRNEALQFCSSCQFGKAHNLPFPLSNSHAQKPFDLIHSDLWGPTPVQSPDGFRFYILFLDDHSR
Query: FTWLYPLKQKNDAFSAFKHFIQLVQTQFNSRIKAFQSDNGREFVHIHR
FTW++PLKQK++ AF F LV+ QFN +IK + D G E+ + +
Subjt: FTWLYPLKQKNDAFSAFKHFIQLVQTQFNSRIKAFQSDNGREFVHIHR
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| A0A2K3NEN7 Copia-like polyprotein (Fragment) | 8.2e-121 | 39.27 | Show/hide |
Query: LNQITTIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPEIITQTTGGTVSNPTENAAGAEASSSTTSVVSNPLYEAWITTDQLLLGWLYNSMTSEV
L I ++KLDR N+ LWK+L LP++R K +G++LGTK CP + +T S+ S NP ++ W+ DQ LLGWL NSM ++
Subjt: LNQITTIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPEIITQTTGGTVSNPTENAAGAEASSSTTSVVSNPLYEAWITTDQLLLGWLYNSMTSEV
Query: ATQVMGYNNAKDLWEAIQNLFGIQSRAEEDYLRQTFQQTRKGNTKMTDYLRLMKTHADNLGQAGSPVSSRNLISQVLLGLDEEYNPVVAMIHGRGDISWS
ATQ++ +K LW+ Q+L G +++ YL+ F TRKG KM +YL MK +D L +GSP+S+ +L+ Q L GLD EYNPVV + + ++SW
Subjt: ATQVMGYNNAKDLWEAIQNLFGIQSRAEEDYLRQTFQQTRKGNTKMTDYLRLMKTHADNLGQAGSPVSSRNLISQVLLGLDEEYNPVVAMIHGRGDISWS
Query: EMQAELLVFEKRLELQTAQKTSVS-FSHNTSVNMASKGLTNPPNNHNRGWNVNPNNQRGQNPNNPQRGGSNFNGNRGRGGRGRGYGNYGSNYGNSNRPIC
++QA+LL FE RL+ Q + S + N S N A+K H+RG N +R SNF G RG G+GR + C
Subjt: EMQAELLVFEKRLELQTAQKTSVS-FSHNTSVNMASKGLTNPPNNHNRGWNVNPNNQRGQNPNNPQRGGSNFNGNRGRGGRGRGYGNYGSNYGNSNRPIC
Query: QVCGRPGHLALTCYHRFDKEFSPNQNRNGNFNISNNQSNSGNYVGNTNYAGSSVPATTFVANSGNPFLANPETVIDSNWYVDSGASSHVTGDYNNLVNPR
QVC GH A+ C +RFD+ ++ N S G++ + F+A+P D WY DSGAS+HVT +
Subjt: QVCGRPGHLALTCYHRFDKEFSPNQNRNGNFNISNNQSNSGNYVGNTNYAGSSVPATTFVANSGNPFLANPETVIDSNWYVDSGASSHVTGDYNNLVNPR
Query: EYGGNEQVIIGNGTKLPISFTGSTYLTDGSHVLSLENTLLVPDIAKNLVSVSRLTQDNNLYFEFHGNFCLLKDKASGRVLLKGILRDGLYQLESVQT---
E+ G +++GNG KL I +GST L + L+L + L VP I KNL+SVS+LT DNN++ EF N C +KDK +G+ LLKG L+DGLYQL V
Subjt: EYGGNEQVIIGNGTKLPISFTGSTYLTDGSHVLSLENTLLVPDIAKNLVSVSRLTQDNNLYFEFHGNFCLLKDKASGRVLLKGILRDGLYQLESVQT---
Query: ------LSSSPSLFRRLGHPASKVLDFVIRECNLPVKRNEALQFCSSCQFGKAHNLPFPLSNSHAQKPFDLIHSDLWGPTPVQSPDGFRFYILFLDDHSR
+S S R+LGHP +KVL+ V+++CN+ + ++ FC +CQFGK H LPF S+SH Q+P LIHSD+WGP P+ SP GF++Y+ F+DD SR
Subjt: ------LSSSPSLFRRLGHPASKVLDFVIRECNLPVKRNEALQFCSSCQFGKAHNLPFPLSNSHAQKPFDLIHSDLWGPTPVQSPDGFRFYILFLDDHSR
Query: FTWLYPLKQKNDAFSAFKHFIQLVQTQFNSRIKAFQSDNGREFVHIHRECYRLGQAF
FTW++PLKQK+D AF F L + QFN +IK Q D G E+ + + G F
Subjt: FTWLYPLKQKNDAFSAFKHFIQLVQTQFNSRIKAFQSDNGREFVHIHRECYRLGQAF
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| A0A2Z6MBG6 Integrase catalytic domain-containing protein | 1.1e-125 | 40.65 | Show/hide |
Query: TIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPEIITQTTGGTVSNPTENAAGAEASSSTTSVVSNPLYEAWITTDQLLLGWLYNSMTSEVATQVM
++KLDR N+ LWK+L LP++R KL+G++LGT+ CP E IT SS +S N + W DQ LLGW+ NSMT+E+ATQ++
Subjt: TIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPEIITQTTGGTVSNPTENAAGAEASSSTTSVVSNPLYEAWITTDQLLLGWLYNSMTSEVATQVM
Query: GYNNAKDLWEAIQNLFGIQSRAEEDYLRQTFQQTRKGNTKMTDYLRLMKTHADNLGQAGSPVSSRNLISQVLLGLDEEYNPVVAMIHGRGDISWSEMQAE
+K LW+ Q+L G +R++ YL+ F RKG KM DYL MK D L AG+PVS+ +LI Q L GLD EYNPVV + + +SW ++QA+
Subjt: GYNNAKDLWEAIQNLFGIQSRAEEDYLRQTFQQTRKGNTKMTDYLRLMKTHADNLGQAGSPVSSRNLISQVLLGLDEEYNPVVAMIHGRGDISWSEMQAE
Query: LLVFEKRLELQTAQKTSVSFSHNTSVNMASKGLTNPPNNHNRGWNVNPNNQRGQNPNNPQRGGSNFNGNRGRGGRGRGYGNYGSNYGNSNRPICQVCGRP
LL FE R+E Q T+++ N + N+A N ++ RG++ NN RG N RGGRGR G S + CQVCG
Subjt: LLVFEKRLELQTAQKTSVSFSHNTSVNMASKGLTNPPNNHNRGWNVNPNNQRGQNPNNPQRGGSNFNGNRGRGGRGRGYGNYGSNYGNSNRPICQVCGRP
Query: GHLALTCYHRFDKEFSPNQNRNGNFNISNNQSNSGNYVGNTNYAGSSVPATTFVANSGNPFLANPETVIDSNWYVDSGASSHVTGDYNNLVNPREYGGNE
H+A+ C+HRFDK +S + + G+ S N FLA+ +V D +WY DSGAS+HVT + E+ G
Subjt: GHLALTCYHRFDKEFSPNQNRNGNFNISNNQSNSGNYVGNTNYAGSSVPATTFVANSGNPFLANPETVIDSNWYVDSGASSHVTGDYNNLVNPREYGGNE
Query: QVIIGNGTKLPISFTGSTYLTDGSHVLSLENTLLVPDIAKNLVSVSRLTQDNNLYFEFHGNFCLLKDKASGRVLLKGILRDGLYQLESVQT-----LSSS
+++GNG KL I TGS+ L L+L + L VP+I KNL+SVS+L DNN+ EF N C +KDK +G+V+LKG+L+DGLYQL + +S
Subjt: QVIIGNGTKLPISFTGSTYLTDGSHVLSLENTLLVPDIAKNLVSVSRLTQDNNLYFEFHGNFCLLKDKASGRVLLKGILRDGLYQLESVQT-----LSSS
Query: PSLFRRLGHPASKVLDFVIRECNLPVKRNEALQFCSSCQFGKAHNLPFPLSNSHAQKPFDLIHSDLWGPTPVQSPDGFRFYILFLDDHSRFTWLYPLKQK
S RRLGHP +KVLD V+ C + V ++ FC +CQ+GK H LPF S+SHAQ+P +L+H+D+WGP P+ + GF++Y+ F+DD SRFTW+YPLKQK
Subjt: PSLFRRLGHPASKVLDFVIRECNLPVKRNEALQFCSSCQFGKAHNLPFPLSNSHAQKPFDLIHSDLWGPTPVQSPDGFRFYILFLDDHSRFTWLYPLKQK
Query: NDAFSAFKHFIQLVQTQFNSRIKAFQSDNGREFVHIHRECYRLGQAF
++ AF F L + QFN RIK Q D G E+ + + G F
Subjt: NDAFSAFKHFIQLVQTQFNSRIKAFQSDNGREFVHIHRECYRLGQAF
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 2.8e-17 | 19.59 | Show/hide |
Query: VVSNPLYEAWITTDQLLLGWLYNSMTSEVATQVMGYNNAKDLWEAIQNLFGIQSRAEEDYLRQTFQQTR-KGNTKMTDYLRLMKTHADNLGQAGSPVSSR
++ N + ++W ++ + ++ A+ + E + ++ +S A + LR+ + + + + L AG+ +
Subjt: VVSNPLYEAWITTDQLLLGWLYNSMTSEVATQVMGYNNAKDLWEAIQNLFGIQSRAEEDYLRQTFQQTR-KGNTKMTDYLRLMKTHADNLGQAGSPVSSR
Query: NLISQVLLGLDEEYNPVVAMIHGRGDISWSEMQAELLVFEKRLELQTAQKTSVSFSHNTSVNMASKGLTNPPNNHNRGWNVNPNNQRGQNPNNPQRGGSN
+ IS +L+ L Y+ ++ I + SE L + RL Q+ + HN + + K + +N+N + N R P +G S
Subjt: NLISQVLLGLDEEYNPVVAMIHGRGDISWSEMQAELLVFEKRLELQTAQKTSVSFSHNTSVNMASKGLTNPPNNHNRGWNVNPNNQRGQNPNNPQRGGSN
Query: FNGNRGRGGRGRGYGNYGSNYGNSNRPICQVCGRPGHLALTCYHRFDKEFSPNQNRNGNFNISNNQSNSGNYVGNTNYAGSSVPATTFVANSGNPFLANP
+ + C CGR GH+ C+H K N+N+ + S+ F+ N N
Subjt: FNGNRGRGGRGRGYGNYGSNYGNSNRPICQVCGRPGHLALTCYHRFDKEFSPNQNRNGNFNISNNQSNSGNYVGNTNYAGSSVPATTFVANSGNPFLANP
Query: ETVIDSNWYVDSGASSHVTGDYNNLVNPREYGGNEQVIIGNGTKLPISFTGSTYLTDGSHVLSLENTLLVPDIAKNLVSVSRLTQDNNLYFEFHGNFCLL
+ + + +DSGAS H+ D + + E ++ + + + H ++LE+ L + A NL+SV RL Q+ + EF + +
Subjt: ETVIDSNWYVDSGASSHVTGDYNNLVNPREYGGNEQVIIGNGTKLPISFTGSTYLTDGSHVLSLENTLLVPDIAKNLVSVSRLTQDNNLYFEFHGNFCLL
Query: KDKASGRVLLKGILRD-GLYQLESVQTLSSSPSLFR----RLGHPA-SKVLDF----VIRECNLPVKRNEALQFCSSCQFGKAHNLPFP--LSNSHAQKP
V G+L + + ++ + + FR R GH + K+L+ + + +L + + C C GK LPF +H ++P
Subjt: KDKASGRVLLKGILRD-GLYQLESVQTLSSSPSLFR----RLGHPA-SKVLDF----VIRECNLPVKRNEALQFCSSCQFGKAHNLPFP--LSNSHAQKP
Query: FDLIHSDLWGPTPVQSPDGFRFYILFLDDHSRFTWLYPLKQKNDAFSAFKHFIQLVQTQFNSRIKAFQSDNGREFV--HIHRECYRLGQAFH
++HSD+ GP + D ++++F+D + + Y +K K+D FS F+ F+ + FN ++ DNGRE++ + + C + G ++H
Subjt: FDLIHSDLWGPTPVQSPDGFRFYILFLDDHSRFTWLYPLKQKNDAFSAFKHFIQLVQTQFNSRIKAFQSDNGREFV--HIHRECYRLGQAFH
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.6e-25 | 23.22 | Show/hide |
Query: EAWITTDQLLLGWLYNSMTSEVATQVMGYNNAKDLWEAIQNLFGIQSRAEEDYL-RQTFQQTRKGNTKMTDYLRLMKTHADNLGQAGSPVSSRNLISQVL
E W D+ + ++ +V ++ + A+ +W +++L+ ++ + YL +Q + T +L + L G + + +L
Subjt: EAWITTDQLLLGWLYNSMTSEVATQVMGYNNAKDLWEAIQNLFGIQSRAEEDYL-RQTFQQTRKGNTKMTDYLRLMKTHADNLGQAGSPVSSRNLISQVL
Query: LGLDEEY-NPVVAMIHGRGDISWSEMQAELLVFEKRLELQTAQKTSVSFSHNTSVNMASKGLTNPPNNHNRGWNVNPNNQRGQNPNNPQRGGSNFNGNRG
L Y N ++HG+ I ++ + LL+ EK + P N + + Q +N N G
Subjt: LGLDEEY-NPVVAMIHGRGDISWSEMQAELLVFEKRLELQTAQKTSVSFSHNTSVNMASKGLTNPPNNHNRGWNVNPNNQRGQNPNNPQRGGSNFNGNRG
Query: R-GGRGRGYGNYGSNYGNSNRPICQVCGRPGHLALTCYHRFDKEFSPNQNR-NGNFNISNNQSNSGNYVGNTNYAGSSVPATTFVANSGNPFLANPETVI
R G RG+ S N C C +PGH C PN + G + N N+ V N + + + P
Subjt: R-GGRGRGYGNYGSNYGNSNRPICQVCGRPGHLALTCYHRFDKEFSPNQNR-NGNFNISNNQSNSGNYVGNTNYAGSSVPATTFVANSGNPFLANPETVI
Query: DSNWYVDSGASSHVTGDYNNLVNPREYGGNEQVIIGNGTKLPISFTGSTYL-TDGSHVLSLENTLLVPDIAKNLVSVSRLTQDNNLYFEFHGNFCLLKDK
+S W VD+ AS H T +L G V +GN + I+ G + T+ L L++ VPD+ NL+S L +D Y + N K
Subjt: DSNWYVDSGASSHVTGDYNNLVNPREYGGNEQVIIGNGTKLPISFTGSTYL-TDGSHVLSLENTLLVPDIAKNLVSVSRLTQDNNLYFEFHGNFCLLKDK
Query: ASGRVLLKGILRDGLY---------QLESVQTLSSSPSLFRRLGHPASKVLDFVIRECNLPVKRNEALQFCSSCQFGKAHNLPFPLSNSHAQKPFDLIHS
S V+ KG+ R LY +L + Q S +R+GH + K L + ++ + + ++ C C FGK H + F S+ DL++S
Subjt: ASGRVLLKGILRDGLY---------QLESVQTLSSSPSLFRRLGHPASKVLDFVIRECNLPVKRNEALQFCSSCQFGKAHNLPFPLSNSHAQKPFDLIHS
Query: DLWGPTPVQSPDGFRFYILFLDDHSRFTWLYPLKQKNDAFSAFKHFIQLVQTQFNSRIKAFQSDNGREFVHIHRECY
D+ GP ++S G ++++ F+DD SR W+Y LK K+ F F+ F LV+ + ++K +SDNG E+ E Y
Subjt: DLWGPTPVQSPDGFRFYILFLDDHSRFTWLYPLKQKNDAFSAFKHFIQLVQTQFNSRIKAFQSDNGREFVHIHRECY
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| Q12501 Transposon Ty2-OR2 Gag-Pol polyprotein | 8.4e-14 | 22.65 | Show/hide |
Query: ANPETVIDSN------WYVDSGASSHVTGDYNNLVNPREYGGNEQVIIGNGTK--LPISFTGSTYLTDGSHVLSLENTLLVPDIAKNLVSVSRLTQDNNL
+ P IDSN +DSGAS + + L + N ++ I + K +PI+ G+ + + + L P+IA +L+S+S LT + N+
Subjt: ANPETVIDSN------WYVDSGASSHVTGDYNNLVNPREYGGNEQVIIGNGTK--LPISFTGSTYLTDGSHVLSLENTLLVPDIAKNLVSVSRLTQDNNL
Query: YFEFHGNFCLLKDKASGRVLLKGILRDGLYQLESVQTLSSS--------------------PSLFRRLGHPASKVLDFVIRECNLPVKRNEALQF-----
F N +++ G VL + Y L + S P + R LGH + + +++ + + +++
Subjt: YFEFHGNFCLLKDKASGRVLLKGILRDGLYQLESVQTLSSS--------------------PSLFRRLGHPASKVLDFVIRECNLPVKRNEALQF-----
Query: --CSSCQFGKA----HNLPFPLSNSHAQKPFDLIHSDLWGPTPVQSPDGFRFYILFLDDHSRFTWLYPL--KQKNDAFSAFKHFIQLVQTQFNSRIKAFQ
C C GK+ H L + +PF +H+D++GP ++I F D+ +RF W+YPL +++ + F + ++ QFN+R+ Q
Subjt: --CSSCQFGKA----HNLPFPLSNSHAQKPFDLIHSDLWGPTPVQSPDGFRFYILFLDDHSRFTWLYPL--KQKNDAFSAFKHFIQLVQTQFNSRIKAFQ
Query: SDNGREFVH
D G E+ +
Subjt: SDNGREFVH
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.0e-67 | 30.52 | Show/hide |
Query: LNQITTIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPEIITQTTGGTVSNPTENAAGAEASSSTTSVVSNPLYEAWITTDQLLLGWLYNSMTSEV
+N KL N+L+W + Y+L G L G+ PP I GT + P NP Y W D+L+ + +++ V
Subjt: LNQITTIKLDRGNFLLWKNLALPILRSYKLEGHLLGTKPCPPEIITQTTGGTVSNPTENAAGAEASSSTTSVVSNPLYEAWITTDQLLLGWLYNSMTSEV
Query: ATQVMGYNNAKDLWEAIQNLFGIQSRAEEDYLRQTFQQTRKGNTKMTDYLRLMKTHADNLGQAGSPVSSRNLISQVLLGLDEEYNPVVAMIHGRG-DISW
V A +WE ++ ++ S LR +Q KG + DY++ + T D L G P+ + +VL L EEY PV+ I + +
Subjt: ATQVMGYNNAKDLWEAIQNLFGIQSRAEEDYLRQTFQQTRKGNTKMTDYLRLMKTHADNLGQAGSPVSSRNLISQVLLGLDEEYNPVVAMIHGRG-DISW
Query: SEMQAELLVFEKRLELQTAQKTSVSFSHNTSVNMASKGLTNPPNNHNRGWNVNPNNQRGQNPNNP-QRGGSNFNGNRGRGGRGRGYGNYGSNYGNSNRPI
+E+ LL E ++ L + T + + N ++ + T NN+N N +N+ N + P Q+ +NF+ N N ++P
Subjt: SEMQAELLVFEKRLELQTAQKTSVSFSHNTSVNMASKGLTNPPNNHNRGWNVNPNNQRGQNPNNP-QRGGSNFNGNRGRGGRGRGYGNYGSNYGNSNRPI
Query: ---CQVCGRPGHLALTCYHRFDKEFSPNQNRNGNFNISNNQSNSGNYVGNTNYAGSSVPATTFVANSGNPFLANPETVIDSNWYVDSGASSHVTGDYNNL
CQ+CG GH A C S +++ + N S P + F LA +NW +DSGA+ H+T D+NNL
Subjt: ---CQVCGRPGHLALTCYHRFDKEFSPNQNRNGNFNISNNQSNSGNYVGNTNYAGSSVPATTFVANSGNPFLANPETVIDSNWYVDSGASSHVTGDYNNL
Query: VNPREYGGNEQVIIGNGTKLPISFTGSTYLTDGSHVLSLENTLLVPDIAKNLVSVSRLTQDNNLYFEFHGNFCLLKDKASGRVLLKGILRDGLYQ--LES
+ Y G + V++ +G+ +PIS TGST L+ S L+L N L VP+I KNL+SV RL N + EF +KD +G LL+G +D LY+ + S
Subjt: VNPREYGGNEQVIIGNGTKLPISFTGSTYLTDGSHVLSLENTLLVPDIAKNLVSVSRLTQDNNLYFEFHGNFCLLKDKASGRVLLKGILRDGLYQ--LES
Query: VQTLS--SSP-------SLFRRLGHPASKVLDFVIRECNLPVKRNEALQF--CSSCQFGKAHNLPFPLSNSHAQKPFDLIHSDLWGPTPVQSPDGFRFYI
Q +S +SP S RLGHPA +L+ VI +L V N + +F CS C K++ +PF S ++ +P + I+SD+W +P+ S D +R+Y+
Subjt: VQTLS--SSP-------SLFRRLGHPASKVLDFVIRECNLPVKRNEALQF--CSSCQFGKAHNLPFPLSNSHAQKPFDLIHSDLWGPTPVQSPDGFRFYI
Query: LFLDDHSRFTWLYPLKQKNDAFSAFKHFIQLVQTQFNSRIKAFQSDNGREFV
+F+D +R+TWLYPLKQK+ F F L++ +F +RI F SDNG EFV
Subjt: LFLDDHSRFTWLYPLKQKNDAFSAFKHFIQLVQTQFNSRIKAFQSDNGREFV
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 3.4e-55 | 31.6 | Show/hide |
Query: NPLYEAWITTDQLLLGWLYNSMTSEVATQVMGYNNAKDLWEAIQNLFGIQSRAEEDYLRQTFQQTRKGNTKMTDYLRLMKTHADNLGQAGSPVSSRNLIS
NP Y W D+L+ + +++ V V A +WE ++ ++ S LR T D L G P+ +
Subjt: NPLYEAWITTDQLLLGWLYNSMTSEVATQVMGYNNAKDLWEAIQNLFGIQSRAEEDYLRQTFQQTRKGNTKMTDYLRLMKTHADNLGQAGSPVSSRNLIS
Query: QVLLGLDEEYNPVVAMIHGRG-DISWSEMQAELLVFE-KRLELQTAQKTSVSFSHNTSVNMASKGLTNP-PNNHNRGWNVNPNNQRGQ-NPNNPQRGGSN
+VL L ++Y PV+ I + S +E+ L+ E K L L +A+ + + N+ + TN N +NRG N N NN + N P GS
Subjt: QVLLGLDEEYNPVVAMIHGRG-DISWSEMQAELLVFE-KRLELQTAQKTSVSFSHNTSVNMASKGLTNP-PNNHNRGWNVNPNNQRGQ-NPNNPQRGGSN
Query: FNGNRGRGGRGRGYGNYGSNYGNSNRPICQVCGRPGHLALTCYHRFDKEFSPNQNRNGNFNISNNQSNSGNYVGNTNYAGSSVPATTFVANSGNPFLANP
+ + + GR CQ+C GH A C P ++ F + NQ S T+ P NS P+ AN
Subjt: FNGNRGRGGRGRGYGNYGSNYGNSNRPICQVCGRPGHLALTCYHRFDKEFSPNQNRNGNFNISNNQSNSGNYVGNTNYAGSSVPATTFVANSGNPFLANP
Query: ETVIDSNWYVDSGASSHVTGDYNNLVNPREYGGNEQVIIGNGTKLPISFTGSTYLTDGSHVLSLENTLLVPDIAKNLVSVSRLTQDNNLYFEFHGNFCLL
NW +DSGA+ H+T D+NNL + Y G + V+I +G+ +PI+ TGS L S L L L VP+I KNL+SV RL N + EF +
Subjt: ETVIDSNWYVDSGASSHVTGDYNNLVNPREYGGNEQVIIGNGTKLPISFTGSTYLTDGSHVLSLENTLLVPDIAKNLVSVSRLTQDNNLYFEFHGNFCLL
Query: KDKASGRVLLKGILRDGLYQ--LESVQTLS--SSP-------SLFRRLGHPASKVLDFVIRECNLPV-KRNEALQFCSSCQFGKAHNLPFPLSNSHAQKP
KD +G LL+G +D LY+ + S Q +S +SP S RLGHP+ +L+ VI +LPV + L CS C K+H +PF S + KP
Subjt: KDKASGRVLLKGILRDGLYQ--LESVQTLS--SSP-------SLFRRLGHPASKVLDFVIRECNLPV-KRNEALQFCSSCQFGKAHNLPFPLSNSHAQKP
Query: FDLIHSDLWGPTPVQSPDGFRFYILFLDDHSRFTWLYPLKQKNDAFSAFKHFIQLVQTQFNSRIKAFQSDNGREFV
+ I+SD+W +P+ S D +R+Y++F+D +R+TWLYPLKQK+ F F LV+ +F +RI SDNG EFV
Subjt: FDLIHSDLWGPTPVQSPDGFRFYILFLDDHSRFTWLYPLKQKNDAFSAFKHFIQLVQTQFNSRIKAFQSDNGREFV
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