; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0031846 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031846
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionE3 ubiquitin-protein ligase COP1-like
Genome locationchr11:16389595..16390233
RNA-Seq ExpressionLag0031846
SyntenyLag0031846
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8661093.1 hypothetical protein F3Y22_tig00116939pilonHSYRG00213 [Hibiscus syriacus]2.1e-0630.33Show/hide
Query:  APTETEETEAEEPRLSFDRFINDLARAKYSEMLKRDFLFE----------RGFGDDLSHILKVGITNHRWDQFCSKPEPVNSNVVREFYVNIYDEEGFQA
        APT+T          ++ +F ND A+A++     R   FE           GFG D+  I+    T  +W +F   P  VN+++V+EFY NI+    +  
Subjt:  APTETEETEAEEPRLSFDRFINDLARAKYSEMLKRDFLFE----------RGFGDDLSHILKVGITNHRWDQFCSKPEPVNSNVVREFYVNIYDEEGFQA

Query:  IVRGVAVDWRPGAVNSLYNLQD
         VRG  + +   A+N  ++LQD
Subjt:  IVRGVAVDWRPGAVNSLYNLQD

KAE8680640.1 hypothetical protein F3Y22_tig00111372pilonHSYRG00020 [Hibiscus syriacus]1.4e-0531.15Show/hide
Query:  APTETEETEAEEPRLSFDRFINDLARAKYSEMLKRDFLFE----------RGFGDDLSHILKVGITNHRWDQFCSKPEPVNSNVVREFYVNIYDEEGFQA
        APT+T          S+ +F +D A+A++    K+   FE           GFG D+  I    +T  +W +F   P  VN++VV+EFY NI        
Subjt:  APTETEETEAEEPRLSFDRFINDLARAKYSEMLKRDFLFE----------RGFGDDLSHILKVGITNHRWDQFCSKPEPVNSNVVREFYVNIYDEEGFQA

Query:  IVRGVAVDWRPGAVNSLYNLQD
         VRG  + + P A+   ++LQD
Subjt:  IVRGVAVDWRPGAVNSLYNLQD

KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]2.9e-0831.63Show/hide
Query:  FINDLARAKYSEMLKRDFLFERGFGDDLSHILKVG------ITNHRWDQFCSKPEPVNSNVVREFYVNIYDEEGFQAIVRGVAVDWRPGAVNSLYNLQ
        F+++ A+  Y  +  R   FE GF    +    +G      +T H+W +F   P PVN+ +V+EFY NI +      +VRG+++ + P A+N  + LQ
Subjt:  FINDLARAKYSEMLKRDFLFERGFGDDLSHILKVG------ITNHRWDQFCSKPEPVNSNVVREFYVNIYDEEGFQAIVRGVAVDWRPGAVNSLYNLQ

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]9.4e-0735.64Show/hide
Query:  RFINDLARAKYSEMLK-RDFLFERGFGDDLSH------ILKVGITNHRWDQFCSKPEPVNSNVVREFYVNIYDEEGFQAIVRGVAVDWRPGAVNSLYNLQ
        +F  + A  +Y   ++ R    E+GF  D S        +   IT H W QFC+ PE     +VREFY N+ D E     VRGV V W   A+N+++ L 
Subjt:  RFINDLARAKYSEMLK-RDFLFERGFGDDLSH------ILKVGITNHRWDQFCSKPEPVNSNVVREFYVNIYDEEGFQAIVRGVAVDWRPGAVNSLYNLQ

Query:  D
        D
Subjt:  D

PON85987.1 hypothetical protein TorRG33x02_181920, partial [Trema orientale]6.1e-0633.93Show/hide
Query:  RFINDLARAKYSEMLKRDFL-FERGFGDDLSH------ILKVGITNHRWDQFCSKPEPVNSNVVREFYVNIYDEEGFQAIVRGVAVDWRPGAVNSLYNLQ
        +F  + A  +Y E +++  L  E+GF  + S        +   I  H W QFC+ PE     +VREFY N+ D E     VRGV V W   A+N+++ L 
Subjt:  RFINDLARAKYSEMLKRDFL-FERGFGDDLSH------ILKVGITNHRWDQFCSKPEPVNSNVVREFYVNIYDEEGFQAIVRGVAVDWRPGAVNSLYNLQ

Query:  DFPHTGYNEMAA
        D P   ++E  A
Subjt:  DFPHTGYNEMAA

TrEMBL top hitse value%identityAlignment
A0A2P5B0K0 Uncharacterized protein6.6e-0634.69Show/hide
Query:  NDLARAKYSEMLK-RDFLFERGFGDDLSHILKVG------ITNHRWDQFCSKPEPVNSNVVREFYVNIYDEEGFQAIVRGVAVDWRPGAVNSLYNLQD
        ++ A  +Y E ++ R    E+GF  D S  L+        IT H W  FC+ PE + + +VREFY N+ + +     VRGV V     A+N++Y L D
Subjt:  NDLARAKYSEMLK-RDFLFERGFGDDLSHILKVG------ITNHRWDQFCSKPEPVNSNVVREFYVNIYDEEGFQAIVRGVAVDWRPGAVNSLYNLQD

A0A2P5BCG4 Uncharacterized protein (Fragment)4.6e-0735.64Show/hide
Query:  RFINDLARAKYSEMLK-RDFLFERGFGDDLSH------ILKVGITNHRWDQFCSKPEPVNSNVVREFYVNIYDEEGFQAIVRGVAVDWRPGAVNSLYNLQ
        +F  + A  +Y   ++ R    E+GF  D S        +   IT H W QFC+ PE     +VREFY N+ D E     VRGV V W   A+N+++ L 
Subjt:  RFINDLARAKYSEMLK-RDFLFERGFGDDLSH------ILKVGITNHRWDQFCSKPEPVNSNVVREFYVNIYDEEGFQAIVRGVAVDWRPGAVNSLYNLQ

Query:  D
        D
Subjt:  D

A0A2P5EK98 Uncharacterized protein (Fragment)3.0e-0633.93Show/hide
Query:  RFINDLARAKYSEMLKRDFL-FERGFGDDLSH------ILKVGITNHRWDQFCSKPEPVNSNVVREFYVNIYDEEGFQAIVRGVAVDWRPGAVNSLYNLQ
        +F  + A  +Y E +++  L  E+GF  + S        +   I  H W QFC+ PE     +VREFY N+ D E     VRGV V W   A+N+++ L 
Subjt:  RFINDLARAKYSEMLKRDFL-FERGFGDDLSH------ILKVGITNHRWDQFCSKPEPVNSNVVREFYVNIYDEEGFQAIVRGVAVDWRPGAVNSLYNLQ

Query:  DFPHTGYNEMAA
        D P   ++E  A
Subjt:  DFPHTGYNEMAA

A0A6A2WM54 Uncharacterized protein1.0e-0630.33Show/hide
Query:  APTETEETEAEEPRLSFDRFINDLARAKYSEMLKRDFLFE----------RGFGDDLSHILKVGITNHRWDQFCSKPEPVNSNVVREFYVNIYDEEGFQA
        APT+T          ++ +F ND A+A++     R   FE           GFG D+  I+    T  +W +F   P  VN+++V+EFY NI+    +  
Subjt:  APTETEETEAEEPRLSFDRFINDLARAKYSEMLKRDFLFE----------RGFGDDLSHILKVGITNHRWDQFCSKPEPVNSNVVREFYVNIYDEEGFQA

Query:  IVRGVAVDWRPGAVNSLYNLQD
         VRG  + +   A+N  ++LQD
Subjt:  IVRGVAVDWRPGAVNSLYNLQD

A0A6A2ZUE4 Uncharacterized protein1.4e-0831.63Show/hide
Query:  FINDLARAKYSEMLKRDFLFERGFGDDLSHILKVG------ITNHRWDQFCSKPEPVNSNVVREFYVNIYDEEGFQAIVRGVAVDWRPGAVNSLYNLQ
        F+++ A+  Y  +  R   FE GF    +    +G      +T H+W +F   P PVN+ +V+EFY NI +      +VRG+++ + P A+N  + LQ
Subjt:  FINDLARAKYSEMLKRDFLFERGFGDDLSHILKVG------ITNHRWDQFCSKPEPVNSNVVREFYVNIYDEEGFQAIVRGVAVDWRPGAVNSLYNLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCAGGACCAGGGCAATAGTCAAGAACAACAGAATCAAGAAGTTGTGCCAGAGAAACAATTATGAGAAAGAAGAGCAAGAGAAAGAAAAGGCTGAGAAAAAGGCGGA
AGAAGAGGCCCTAGCGAAGCAGCAAGAAGACAAGGACAAAGGAGTTGCTAAAGCGCCGACAGAGACAGAGGAGACTGAAGCTGAGGAACCGAGACTGTCGTTTGATCGCT
TCATCAATGATCTTGCCCGAGCAAAATATTCAGAGATGCTGAAGAGGGATTTTCTGTTTGAGAGAGGATTCGGTGATGACCTGTCGCACATCTTAAAAGTTGGAATTACA
AATCACAGATGGGATCAGTTTTGCTCGAAACCAGAGCCGGTAAATTCGAATGTTGTTCGTGAGTTTTATGTGAACATATATGATGAAGAAGGGTTTCAAGCAATTGTTCG
TGGGGTAGCAGTGGACTGGAGACCTGGAGCGGTAAATTCTCTATATAACCTGCAAGATTTCCCACATACCGGGTATAATGAAATGGCAGCAGCGCCATCCAATGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTGCAGGACCAGGGCAATAGTCAAGAACAACAGAATCAAGAAGTTGTGCCAGAGAAACAATTATGAGAAAGAAGAGCAAGAGAAAGAAAAGGCTGAGAAAAAGGCGGA
AGAAGAGGCCCTAGCGAAGCAGCAAGAAGACAAGGACAAAGGAGTTGCTAAAGCGCCGACAGAGACAGAGGAGACTGAAGCTGAGGAACCGAGACTGTCGTTTGATCGCT
TCATCAATGATCTTGCCCGAGCAAAATATTCAGAGATGCTGAAGAGGGATTTTCTGTTTGAGAGAGGATTCGGTGATGACCTGTCGCACATCTTAAAAGTTGGAATTACA
AATCACAGATGGGATCAGTTTTGCTCGAAACCAGAGCCGGTAAATTCGAATGTTGTTCGTGAGTTTTATGTGAACATATATGATGAAGAAGGGTTTCAAGCAATTGTTCG
TGGGGTAGCAGTGGACTGGAGACCTGGAGCGGTAAATTCTCTATATAACCTGCAAGATTTCCCACATACCGGGTATAATGAAATGGCAGCAGCGCCATCCAATGAATAG
Protein sequenceShow/hide protein sequence
MCRTRAIVKNNRIKKLCQRNNYEKEEQEKEKAEKKAEEEALAKQQEDKDKGVAKAPTETEETEAEEPRLSFDRFINDLARAKYSEMLKRDFLFERGFGDDLSHILKVGIT
NHRWDQFCSKPEPVNSNVVREFYVNIYDEEGFQAIVRGVAVDWRPGAVNSLYNLQDFPHTGYNEMAAAPSNE