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Lag0031851 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031851
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPol protein
Genome locationchr11:16655672..16659681
RNA-Seq ExpressionLag0031851
SyntenyLag0031851
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047195.1 pol protein [Cucumis melo var. makuwa]2.1e-1141.67Show/hide
Query:  LVLSPTMSTVHDVFYVSMLWRCVHHPSHVLNPEPLSTIEDLAFVVEKPVKILAKETKILRSKTVVLVEELWVYHRPPPTESVAATDEEHHRP-DRVAVVV
        L L P++STVHDVF+VSML + V  PSHV++ EPL   E+L++  E+PV++LAKE K LR+K + LV+ LW  HR    E+    +E+   P   V    
Subjt:  LVLSPTMSTVHDVFYVSMLWRCVHHPSHVLNPEPLSTIEDLAFVVEKPVKILAKETKILRSKTVVLVEELWVYHRPPPTESVAATDEEHHRP-DRVAVVV

Query:  SVQRRHCLKSRSPVRTILISMGSLSRESLSSS
        ++     L S SP  T L++  S    S+S+S
Subjt:  SVQRRHCLKSRSPVRTILISMGSLSRESLSSS

KAA0049664.1 pol protein [Cucumis melo var. makuwa]1.2e-1156Show/hide
Query:  LVLSPTMSTVHDVFYVSMLWRCVHHPSHVLNPEPLSTIEDLAFVVEKPVKILAKETKILRSKTVVLVEELWVYHR
        L L P++STVHDVF+VSML + V  PSHV++ EPL   E+L++ VE+PV++LA+E K LR+K + LV+ LW YHR
Subjt:  LVLSPTMSTVHDVFYVSMLWRCVHHPSHVLNPEPLSTIEDLAFVVEKPVKILAKETKILRSKTVVLVEELWVYHR

KAA0062524.1 pol protein [Cucumis melo var. makuwa]4.7e-1154.67Show/hide
Query:  LVLSPTMSTVHDVFYVSMLWRCVHHPSHVLNPEPLSTIEDLAFVVEKPVKILAKETKILRSKTVVLVEELWVYHR
        L LSP++STVHDVF+VSML + V  PSHV++ EPL   E+L++ +E+PV++LA+E K LR+K + LV+ LW  HR
Subjt:  LVLSPTMSTVHDVFYVSMLWRCVHHPSHVLNPEPLSTIEDLAFVVEKPVKILAKETKILRSKTVVLVEELWVYHR

XP_022154998.1 uncharacterized protein LOC111022142 [Momordica charantia]9.5e-1247.87Show/hide
Query:  LKGCCLMSKKASGVNCLEELVLSPTMSTVHDVFYVSMLWRCVHHPSHVLNPEPLSTIEDLAFVVEKPVKILAKETKILRSKTVVLVEELWVYHR
        +KG     KK   V     L L P+++ VH+VF VSML + +H PSHVL+P+ L   E L +  E PVKILAKETK+LR++T+ LV+ LW  H+
Subjt:  LKGCCLMSKKASGVNCLEELVLSPTMSTVHDVFYVSMLWRCVHHPSHVLNPEPLSTIEDLAFVVEKPVKILAKETKILRSKTVVLVEELWVYHR

XP_022158869.1 uncharacterized protein LOC111025333 [Momordica charantia]7.2e-1257.33Show/hide
Query:  LVLSPTMSTVHDVFYVSMLWRCVHHPSHVLNPEPLSTIEDLAFVVEKPVKILAKETKILRSKTVVLVEELWVYHR
        L L P+++ VH+VF+VSML R +H PSHVL+PEPL   E L +  E PVKILAKETK+LR+ T+ LV+ LW  H+
Subjt:  LVLSPTMSTVHDVFYVSMLWRCVHHPSHVLNPEPLSTIEDLAFVVEKPVKILAKETKILRSKTVVLVEELWVYHR

TrEMBL top hitse value%identityAlignment
A0A5A7U0M2 Pol protein1.0e-1141.67Show/hide
Query:  LVLSPTMSTVHDVFYVSMLWRCVHHPSHVLNPEPLSTIEDLAFVVEKPVKILAKETKILRSKTVVLVEELWVYHRPPPTESVAATDEEHHRP-DRVAVVV
        L L P++STVHDVF+VSML + V  PSHV++ EPL   E+L++  E+PV++LAKE K LR+K + LV+ LW  HR    E+    +E+   P   V    
Subjt:  LVLSPTMSTVHDVFYVSMLWRCVHHPSHVLNPEPLSTIEDLAFVVEKPVKILAKETKILRSKTVVLVEELWVYHRPPPTESVAATDEEHHRP-DRVAVVV

Query:  SVQRRHCLKSRSPVRTILISMGSLSRESLSSS
        ++     L S SP  T L++  S    S+S+S
Subjt:  SVQRRHCLKSRSPVRTILISMGSLSRESLSSS

A0A5A7U336 Pol protein6.0e-1256Show/hide
Query:  LVLSPTMSTVHDVFYVSMLWRCVHHPSHVLNPEPLSTIEDLAFVVEKPVKILAKETKILRSKTVVLVEELWVYHR
        L L P++STVHDVF+VSML + V  PSHV++ EPL   E+L++ VE+PV++LA+E K LR+K + LV+ LW YHR
Subjt:  LVLSPTMSTVHDVFYVSMLWRCVHHPSHVLNPEPLSTIEDLAFVVEKPVKILAKETKILRSKTVVLVEELWVYHR

A0A5A7V5K5 Pol protein2.3e-1154.67Show/hide
Query:  LVLSPTMSTVHDVFYVSMLWRCVHHPSHVLNPEPLSTIEDLAFVVEKPVKILAKETKILRSKTVVLVEELWVYHR
        L LSP++STVHDVF+VSML + V  PSHV++ EPL   E+L++ +E+PV++LA+E K LR+K + LV+ LW  HR
Subjt:  LVLSPTMSTVHDVFYVSMLWRCVHHPSHVLNPEPLSTIEDLAFVVEKPVKILAKETKILRSKTVVLVEELWVYHR

A0A6J1DLT1 uncharacterized protein LOC1110221424.6e-1247.87Show/hide
Query:  LKGCCLMSKKASGVNCLEELVLSPTMSTVHDVFYVSMLWRCVHHPSHVLNPEPLSTIEDLAFVVEKPVKILAKETKILRSKTVVLVEELWVYHR
        +KG     KK   V     L L P+++ VH+VF VSML + +H PSHVL+P+ L   E L +  E PVKILAKETK+LR++T+ LV+ LW  H+
Subjt:  LKGCCLMSKKASGVNCLEELVLSPTMSTVHDVFYVSMLWRCVHHPSHVLNPEPLSTIEDLAFVVEKPVKILAKETKILRSKTVVLVEELWVYHR

A0A6J1E0P3 uncharacterized protein LOC1110253333.5e-1257.33Show/hide
Query:  LVLSPTMSTVHDVFYVSMLWRCVHHPSHVLNPEPLSTIEDLAFVVEKPVKILAKETKILRSKTVVLVEELWVYHR
        L L P+++ VH+VF+VSML R +H PSHVL+PEPL   E L +  E PVKILAKETK+LR+ T+ LV+ LW  H+
Subjt:  LVLSPTMSTVHDVFYVSMLWRCVHHPSHVLNPEPLSTIEDLAFVVEKPVKILAKETKILRSKTVVLVEELWVYHR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGGCTTATTGAGTCAGTGTATTGGCCACTCTCACCTATACAAATCAAAGGACAATCCCTCACGAGTAGGAGCCATAATCAACTCAGGATTAAGACTAACTCGTCT
AGGTTGTCCTAGTGAAATAGAAAACCAACTAGTTAAGGTTGCTCGTGAGCAAGCTTTGCTTCAAGTGTTGTATGTGCAACACGACTCGTCTCAAGAGTTGTTGTTATGCA
TACACATCAGCTATTCCTCTTGTGTCGCAGTCTTAAGCTTTGGGATTCTAAAGGGATGTTGCTTGATGAGCAAAAAAGCCTCTGGTGTTAACTGCCTTGAGGAGTTGGTG
TTATCACCGACCATGTCGACTGTGCATGATGTGTTCTATGTTTCTATGTTGTGGAGATGTGTGCATCATCCTTCGCACGTGTTAAATCCTGAACCCCTGTCGACGATCGA
GGACTTGGCATTTGTGGTGGAGAAGCCTGTCAAGATCCTAGCCAAGGAAACAAAGATTTTGAGAAGCAAGACCGTCGTTTTGGTGGAAGAGCTATGGGTGTACCATAGAC
CCCCCCCAACCGAATCTGTAGCCGCCACCGATGAGGAGCACCACCGTCCAGATCGCGTCGCCGTCGTGGTCTCCGTTCAGCGCCGCCACTGTCTGAAGTCACGCAGCCCA
GTCCGCACGATTCTTATTTCCATGGGTTCTCTCTCTCGTGAGTCTCTCTCTTCTAGTGGGGTTGATATCTGCGATCTCCCTCCCTCTTGGGTCTTCGTGTGGAGGTCGCA
CAGTCCAGTCATTGCAGTCGTTCTGCTATGTAGCCCCGAGCGCTTGCCTGGTCTAAGGTTCTCTATGTTCAGTTTGGTTAGATCTCGCGTGCCTAGCAGTTTGAAGCCCC
GTCGACCTCACTTGGTTGTTGTTGGTGACGTTTGGCGTCTTCGTGTCGTCTTTGCTCAGTTTGTGAGTGTTTCGGCATCAATTAGTGTTTCCGGTCCTAGAGCATGTTTA
AAATGGGTCGTTCCCGCTGTTCGTTGTTTAGTAGCATGTAGTACCAATGGTTGTTCAGTGTTCTTGCCTAGTAACCTTGCTCATCCTTTCTGGAAGCTCGTTTTTGAGCG
TGATTATGTAGTTTCAGCTAGCGTTGGTATTGAGGATGATCCGGATCTTGGTGGCAAGGAGGAGAACTGCGAGGATTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTAGGCTTATTGAGTCAGTGTATTGGCCACTCTCACCTATACAAATCAAAGGACAATCCCTCACGAGTAGGAGCCATAATCAACTCAGGATTAAGACTAACTCGTCT
AGGTTGTCCTAGTGAAATAGAAAACCAACTAGTTAAGGTTGCTCGTGAGCAAGCTTTGCTTCAAGTGTTGTATGTGCAACACGACTCGTCTCAAGAGTTGTTGTTATGCA
TACACATCAGCTATTCCTCTTGTGTCGCAGTCTTAAGCTTTGGGATTCTAAAGGGATGTTGCTTGATGAGCAAAAAAGCCTCTGGTGTTAACTGCCTTGAGGAGTTGGTG
TTATCACCGACCATGTCGACTGTGCATGATGTGTTCTATGTTTCTATGTTGTGGAGATGTGTGCATCATCCTTCGCACGTGTTAAATCCTGAACCCCTGTCGACGATCGA
GGACTTGGCATTTGTGGTGGAGAAGCCTGTCAAGATCCTAGCCAAGGAAACAAAGATTTTGAGAAGCAAGACCGTCGTTTTGGTGGAAGAGCTATGGGTGTACCATAGAC
CCCCCCCAACCGAATCTGTAGCCGCCACCGATGAGGAGCACCACCGTCCAGATCGCGTCGCCGTCGTGGTCTCCGTTCAGCGCCGCCACTGTCTGAAGTCACGCAGCCCA
GTCCGCACGATTCTTATTTCCATGGGTTCTCTCTCTCGTGAGTCTCTCTCTTCTAGTGGGGTTGATATCTGCGATCTCCCTCCCTCTTGGGTCTTCGTGTGGAGGTCGCA
CAGTCCAGTCATTGCAGTCGTTCTGCTATGTAGCCCCGAGCGCTTGCCTGGTCTAAGGTTCTCTATGTTCAGTTTGGTTAGATCTCGCGTGCCTAGCAGTTTGAAGCCCC
GTCGACCTCACTTGGTTGTTGTTGGTGACGTTTGGCGTCTTCGTGTCGTCTTTGCTCAGTTTGTGAGTGTTTCGGCATCAATTAGTGTTTCCGGTCCTAGAGCATGTTTA
AAATGGGTCGTTCCCGCTGTTCGTTGTTTAGTAGCATGTAGTACCAATGGTTGTTCAGTGTTCTTGCCTAGTAACCTTGCTCATCCTTTCTGGAAGCTCGTTTTTGAGCG
TGATTATGTAGTTTCAGCTAGCGTTGGTATTGAGGATGATCCGGATCTTGGTGGCAAGGAGGAGAACTGCGAGGATTTCTAG
Protein sequenceShow/hide protein sequence
MVGLLSQCIGHSHLYKSKDNPSRVGAIINSGLRLTRLGCPSEIENQLVKVAREQALLQVLYVQHDSSQELLLCIHISYSSCVAVLSFGILKGCCLMSKKASGVNCLEELV
LSPTMSTVHDVFYVSMLWRCVHHPSHVLNPEPLSTIEDLAFVVEKPVKILAKETKILRSKTVVLVEELWVYHRPPPTESVAATDEEHHRPDRVAVVVSVQRRHCLKSRSP
VRTILISMGSLSRESLSSSGVDICDLPPSWVFVWRSHSPVIAVVLLCSPERLPGLRFSMFSLVRSRVPSSLKPRRPHLVVVGDVWRLRVVFAQFVSVSASISVSGPRACL
KWVVPAVRCLVACSTNGCSVFLPSNLAHPFWKLVFERDYVVSASVGIEDDPDLGGKEENCEDF