CuGenDBv2

Gene ID	Lag0031865
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Zinc finger BED domain-containing protein RICESLEEPER 2-like
Genome location	chr11:17178122..17178565
RNA-Seq Expression	Lag0031865
Synteny	Lag0031865
Gene Ontology terms	GO:0110165 - cellular anatomical structure (cellular component) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	IPR008906 - HAT, C-terminal dimerisation domain IPR012337 - Ribonuclease H-like superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0031947.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]

6.6e-27

53.69

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Query:  MVKGMVDSIKMCLVRLYNFYMSKS-----HDDISSSST---QSSSSDHQQSECSFTSLSMESGASPSASNLARYKRRREEKSSLELKDDVDRYLSDECVE
        MVK +VD I+  L+RLYN Y S++      +D+S  +    Q  SSD  +   S T++  ++    S   L+RYKRRR+E+++LEL++DVDRYLSD C E
Subjt:  MVKGMVDSIKMCLVRLYNFYMSKS-----HDDISSSST---QSSSSDHQQSECSFTSLSMESGASPSASNLARYKRRREEKSSLELKDDVDRYLSDECVE

Query:  LNDKFDVLAWWKLNESRYQVLSKIARDVLAVPVSTVASESAFSTGGGFL
        LND+FDVL WWKLN  +Y +LSKIA+D+ AVPVSTVASESAFSTGG  L
Subjt:  LNDKFDVLAWWKLNESRYQVLSKIARDVLAVPVSTVASESAFSTGGGFL

KAA0050616.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]

1.1e-26

53.47

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Query:  VKGMVDSIKMCLVRLYNFYMSKSHDDISSSSTQSSSSDHQQSECSFTSLSMESGAS----PSASNLARYKRRREEKSSLELKDDVDRYLSDECVELNDKF
        VK +VD I+  L+RLYN Y S++ D    +     +   +Q E S +   + SG +     S   L+RYKRRR+E+++LEL++DVDRYLSD C ELND+F
Subjt:  VKGMVDSIKMCLVRLYNFYMSKSHDDISSSSTQSSSSDHQQSECSFTSLSMESGAS----PSASNLARYKRRREEKSSLELKDDVDRYLSDECVELNDKF

Query:  DVLAWWKLNESRYQVLSKIARDVLAVPVSTVASESAFSTGGGFL
        DVL WWKLN  +Y +LSKIA+D+ AVPVSTVASESAFSTGG  L
Subjt:  DVLAWWKLNESRYQVLSKIARDVLAVPVSTVASESAFSTGGGFL

KAA0065439.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]

1.1e-26

53.47

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Query:  VKGMVDSIKMCLVRLYNFYMSKSHDDISSSSTQSSSSDHQQSECSFTSLSMESGAS----PSASNLARYKRRREEKSSLELKDDVDRYLSDECVELNDKF
        VK +VD I+  L+RLYN Y S++ D    +     +   +Q E S +   + SG +     S   L+RYKRRR+E+++LEL++DVDRYLSD C ELND+F
Subjt:  VKGMVDSIKMCLVRLYNFYMSKSHDDISSSSTQSSSSDHQQSECSFTSLSMESGAS----PSASNLARYKRRREEKSSLELKDDVDRYLSDECVELNDKF

Query:  DVLAWWKLNESRYQVLSKIARDVLAVPVSTVASESAFSTGGGFL
        DVL WWKLN  +Y +LSKIA+D+ AVPVSTVASESAFSTGG  L
Subjt:  DVLAWWKLNESRYQVLSKIARDVLAVPVSTVASESAFSTGGGFL

KAA0067548.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]

1.1e-26

53.47

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Query:  VKGMVDSIKMCLVRLYNFYMSKSHDDISSSSTQSSSSDHQQSECSFTSLSMESGAS----PSASNLARYKRRREEKSSLELKDDVDRYLSDECVELNDKF
        VK +VD I+  L+RLYN Y S++ D    +     +   +Q E S +   + SG +     S   L+RYKRRR+E+++LEL++DVDRYLSD C ELND+F
Subjt:  VKGMVDSIKMCLVRLYNFYMSKSHDDISSSSTQSSSSDHQQSECSFTSLSMESGAS----PSASNLARYKRRREEKSSLELKDDVDRYLSDECVELNDKF

Query:  DVLAWWKLNESRYQVLSKIARDVLAVPVSTVASESAFSTGGGFL
        DVL WWKLN  +Y +LSKIA+D+ AVPVSTVASESAFSTGG  L
Subjt:  DVLAWWKLNESRYQVLSKIARDVLAVPVSTVASESAFSTGGGFL

TYK16769.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]

1.1e-26

53.47

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Query:  VKGMVDSIKMCLVRLYNFYMSKSHDDISSSSTQSSSSDHQQSECSFTSLSMESGAS----PSASNLARYKRRREEKSSLELKDDVDRYLSDECVELNDKF
        VK +VD I+  L+RLYN Y S++ D    +     +   +Q E S +   + SG +     S   L+RYKRRR+E+++LEL++DVDRYLSD C ELND+F
Subjt:  VKGMVDSIKMCLVRLYNFYMSKSHDDISSSSTQSSSSDHQQSECSFTSLSMESGAS----PSASNLARYKRRREEKSSLELKDDVDRYLSDECVELNDKF

Query:  DVLAWWKLNESRYQVLSKIARDVLAVPVSTVASESAFSTGGGFL
        DVL WWKLN  +Y +LSKIA+D+ AVPVSTVASESAFSTGG  L
Subjt:  DVLAWWKLNESRYQVLSKIARDVLAVPVSTVASESAFSTGGGFL

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SRD2 Zinc finger BED domain-containing protein RICESLEEPER 2-like

3.2e-27

53.69

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Query:  MVKGMVDSIKMCLVRLYNFYMSKS-----HDDISSSST---QSSSSDHQQSECSFTSLSMESGASPSASNLARYKRRREEKSSLELKDDVDRYLSDECVE
        MVK +VD I+  L+RLYN Y S++      +D+S  +    Q  SSD  +   S T++  ++    S   L+RYKRRR+E+++LEL++DVDRYLSD C E
Subjt:  MVKGMVDSIKMCLVRLYNFYMSKS-----HDDISSSST---QSSSSDHQQSECSFTSLSMESGASPSASNLARYKRRREEKSSLELKDDVDRYLSDECVE

Query:  LNDKFDVLAWWKLNESRYQVLSKIARDVLAVPVSTVASESAFSTGGGFL
        LND+FDVL WWKLN  +Y +LSKIA+D+ AVPVSTVASESAFSTGG  L
Subjt:  LNDKFDVLAWWKLNESRYQVLSKIARDVLAVPVSTVASESAFSTGGGFL

A0A5A7U8W5 Zinc finger BED domain-containing protein RICESLEEPER 2-like

5.5e-27

53.47

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Query:  VKGMVDSIKMCLVRLYNFYMSKSHDDISSSSTQSSSSDHQQSECSFTSLSMESGAS----PSASNLARYKRRREEKSSLELKDDVDRYLSDECVELNDKF
        VK +VD I+  L+RLYN Y S++ D    +     +   +Q E S +   + SG +     S   L+RYKRRR+E+++LEL++DVDRYLSD C ELND+F
Subjt:  VKGMVDSIKMCLVRLYNFYMSKSHDDISSSSTQSSSSDHQQSECSFTSLSMESGAS----PSASNLARYKRRREEKSSLELKDDVDRYLSDECVELNDKF

Query:  DVLAWWKLNESRYQVLSKIARDVLAVPVSTVASESAFSTGGGFL
        DVL WWKLN  +Y +LSKIA+D+ AVPVSTVASESAFSTGG  L
Subjt:  DVLAWWKLNESRYQVLSKIARDVLAVPVSTVASESAFSTGGGFL

A0A5A7VIJ7 Zinc finger BED domain-containing protein RICESLEEPER 2-like

5.5e-27

53.47

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Query:  VKGMVDSIKMCLVRLYNFYMSKSHDDISSSSTQSSSSDHQQSECSFTSLSMESGAS----PSASNLARYKRRREEKSSLELKDDVDRYLSDECVELNDKF
        VK +VD I+  L+RLYN Y S++ D    +     +   +Q E S +   + SG +     S   L+RYKRRR+E+++LEL++DVDRYLSD C ELND+F
Subjt:  VKGMVDSIKMCLVRLYNFYMSKSHDDISSSSTQSSSSDHQQSECSFTSLSMESGAS----PSASNLARYKRRREEKSSLELKDDVDRYLSDECVELNDKF

Query:  DVLAWWKLNESRYQVLSKIARDVLAVPVSTVASESAFSTGGGFL
        DVL WWKLN  +Y +LSKIA+D+ AVPVSTVASESAFSTGG  L
Subjt:  DVLAWWKLNESRYQVLSKIARDVLAVPVSTVASESAFSTGGGFL

A0A5D3C9B8 Zinc finger BED domain-containing protein RICESLEEPER 2-like

5.5e-27

53.47

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Query:  VKGMVDSIKMCLVRLYNFYMSKSHDDISSSSTQSSSSDHQQSECSFTSLSMESGAS----PSASNLARYKRRREEKSSLELKDDVDRYLSDECVELNDKF
        VK +VD I+  L+RLYN Y S++ D    +     +   +Q E S +   + SG +     S   L+RYKRRR+E+++LEL++DVDRYLSD C ELND+F
Subjt:  VKGMVDSIKMCLVRLYNFYMSKSHDDISSSSTQSSSSDHQQSECSFTSLSMESGAS----PSASNLARYKRRREEKSSLELKDDVDRYLSDECVELNDKF

Query:  DVLAWWKLNESRYQVLSKIARDVLAVPVSTVASESAFSTGGGFL
        DVL WWKLN  +Y +LSKIA+D+ AVPVSTVASESAFSTGG  L
Subjt:  DVLAWWKLNESRYQVLSKIARDVLAVPVSTVASESAFSTGGGFL

A0A5D3DTE1 Zinc finger BED domain-containing protein RICESLEEPER 2-like

5.5e-27

53.47

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Query:  VKGMVDSIKMCLVRLYNFYMSKSHDDISSSSTQSSSSDHQQSECSFTSLSMESGAS----PSASNLARYKRRREEKSSLELKDDVDRYLSDECVELNDKF
        VK +VD I+  L+RLYN Y S++ D    +     +   +Q E S +   + SG +     S   L+RYKRRR+E+++LEL++DVDRYLSD C ELND+F
Subjt:  VKGMVDSIKMCLVRLYNFYMSKSHDDISSSSTQSSSSDHQQSECSFTSLSMESGAS----PSASNLARYKRRREEKSSLELKDDVDRYLSDECVELNDKF

Query:  DVLAWWKLNESRYQVLSKIARDVLAVPVSTVASESAFSTGGGFL
        DVL WWKLN  +Y +LSKIA+D+ AVPVSTVASESAFSTGG  L
Subjt:  DVLAWWKLNESRYQVLSKIARDVLAVPVSTVASESAFSTGGGFL

SwissProt top hits

e value

%identity

Alignment

B9FJG3 Zinc finger BED domain-containing protein RICESLEEPER 1

6.5e-09

43.24

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Query:  EEKSSLELKDDVDRYLSDECVELNDKFDVLAWWKLNESRYQVLSKIARDVLAVPVSTVAS-ESAFSTGGGFLIL
        E  +S   K ++++YL +       +FD+L WWKLN  +Y  LSK+ARD+LA+P+S V+S  S FS G G  +L
Subjt:  EEKSSLELKDDVDRYLSDECVELNDKFDVLAWWKLNESRYQVLSKIARDVLAVPVSTVAS-ESAFSTGGGFLIL

P03010 Putative AC9 transposase

4.5e-10

33.08

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Query:  VDSIKMCLVRLYNFYMSKSHDDISSSSTQSSSSDHQQSECSFTSLSMESGASPSASNLARYKRRREEKSSLELKDDVDRYLSDECVELNDKFDVLAWWKL
        VD     + +LY FY S S     + +T + S D    E                     Y    ++   +E  +++D+Y+S+  ++ + +FD+L+WW+ 
Subjt:  VDSIKMCLVRLYNFYMSKSHDDISSSSTQSSSSDHQQSECSFTSLSMESGASPSASNLARYKRRREEKSSLELKDDVDRYLSDECVELNDKFDVLAWWKL

Query:  NESRYQVLSKIARDVLAVPVSTVASESAFSTGG
          + Y +L++IARDVLA+ VSTVASESAFS GG
Subjt:  NESRYQVLSKIARDVLAVPVSTVASESAFSTGG

P08770 Putative AC transposase

4.5e-10

33.08

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Query:  VDSIKMCLVRLYNFYMSKSHDDISSSSTQSSSSDHQQSECSFTSLSMESGASPSASNLARYKRRREEKSSLELKDDVDRYLSDECVELNDKFDVLAWWKL
        VD     + +LY FY S S     + +T + S D    E                     Y    ++   +E  +++D+Y+S+  ++ + +FD+L+WW+ 
Subjt:  VDSIKMCLVRLYNFYMSKSHDDISSSSTQSSSSDHQQSECSFTSLSMESGASPSASNLARYKRRREEKSSLELKDDVDRYLSDECVELNDKFDVLAWWKL

Query:  NESRYQVLSKIARDVLAVPVSTVASESAFSTGG
          + Y +L++IARDVLA+ VSTVASESAFS GG
Subjt:  NESRYQVLSKIARDVLAVPVSTVASESAFSTGG

Q6AVI0 Zinc finger BED domain-containing protein RICESLEEPER 2

4.2e-08

40.54

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Query:  EEKSSLELKDDVDRYLSDECVELNDKFDVLAWWKLNESRYQVLSKIARDVLAVPVSTVAS-ESAFSTGGGFLIL
        E  +S   K ++++YL +       +FD+L WWKLN  ++  LS++ARD+LA+P+S V+S  S FS G G  +L
Subjt:  EEKSSLELKDDVDRYLSDECVELNDKFDVLAWWKLNESRYQVLSKIARDVLAVPVSTVAS-ESAFSTGGGFLIL

Q9M2N5 Zinc finger BED domain-containing protein DAYSLEEPER

4.2e-08

38.67

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Query:  ASNLARYKRRREEKSSLELKDDVDRYLSDECVELNDKFDVLAWWKLNESRYQVLSKIARDVLAVPVSTVASESAF
        A  L+ +     E +   LK ++D+YL +  +    +FDVL WWK N+ +Y  LSK+ARD+L++PVS  A +  F
Subjt:  ASNLARYKRRREEKSSLELKDDVDRYLSDECVELNDKFDVLAWWKLNESRYQVLSKIARDVLAVPVSTVASESAF

Arabidopsis top hits

e value

%identity

Alignment

AT1G18560.1 BED zinc finger ;hAT family dimerisation domain

3.1e-06

37.1

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Query:  DDISSSSTQSSSSDHQQSECSFTSLSMESGASPS-----------ASNLARYKRRREEKSSLELKDDVDRYLSDECVELNDKFDVLAWWKLNESRYQVLS
        D+  S   ++ SS H      FTS SM SG  P            A  +AR KRR     S  + D++ +YLS+  V +  + DVL WWK+N  RY  LS
Subjt:  DDISSSSTQSSSSDHQQSECSFTSLSMESGASPS-----------ASNLARYKRRREEKSSLELKDDVDRYLSDECVELNDKFDVLAWWKLNESRYQVLS

Query:  KIARDVLAVPVSTVASESAFSTGG
         +ARD LAV  ++ A E  F   G
Subjt:  KIARDVLAVPVSTVASESAFSTGG

AT3G42170.1 BED zinc finger ;hAT family dimerisation domain

3.0e-09

38.67

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Query:  ASNLARYKRRREEKSSLELKDDVDRYLSDECVELNDKFDVLAWWKLNESRYQVLSKIARDVLAVPVSTVASESAF
        A  L+ +     E +   LK ++D+YL +  +    +FDVL WWK N+ +Y  LSK+ARD+L++PVS  A +  F
Subjt:  ASNLARYKRRREEKSSLELKDDVDRYLSDECVELNDKFDVLAWWKLNESRYQVLSKIARDVLAVPVSTVASESAF

Sequences

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CDS sequence

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ATGGTTAAAGGGATGGTTGATAGCATCAAGATGTGTTTGGTTCGTCTGTATAATTTTTACATGTCAAAGTCACATGATGATATTTCTAGTTCTAGTACTCAAAGTTCTAG
TAGTGATCATCAACAATCAGAATGTAGTTTTACTTCTTTGAGTATGGAATCTGGTGCAAGTCCGAGTGCATCAAATTTGGCTCGGTACAAGAGAAGAAGAGAAGAAAAAA
GTTCTTTAGAATTGAAGGATGATGTGGATCGATATTTATCTGACGAATGTGTGGAACTTAATGATAAATTTGATGTTTTGGCTTGGTGGAAACTGAATGAGTCTAGATAT
CAAGTTTTATCAAAAATCGCTCGAGATGTTTTGGCAGTTCCAGTGTCTACCGTGGCTTCTGAATCAGCATTTAGTACTGGAGGAGGATTCTTAATTCTTGTAGAAGTTCT
TTGA

mRNA sequence

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Protein sequence

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MVKGMVDSIKMCLVRLYNFYMSKSHDDISSSSTQSSSSDHQQSECSFTSLSMESGASPSASNLARYKRRREEKSSLELKDDVDRYLSDECVELNDKFDVLAWWKLNESRY
QVLSKIARDVLAVPVSTVASESAFSTGGGFLILVEVL

Lag0031865 (gene) of Sponge gourd (AG-4) v1 genome