; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0031874 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031874
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr11:17534372..17537537
RNA-Seq ExpressionLag0031874
SyntenyLag0031874
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG54013.1 hypothetical protein EZV62_019269 [Acer yangbiense]2.0e-0828.15Show/hide
Query:  KLQDSAIDSSEKKMENSLLCKVLTSKKISPEIFSLKMSRIWNQEHTI-IEQVGFNVFLCKFKNARVKGRVIEEGPWFFDKAMLLFEEPKADIHAEDMEF-
        +++ S  +  E+ +  SL+ K +T+K I+ E F   +S IW  ++ + +E +G N+F  +F+N   + R++E GPW FDK +L+  E        D++F 
Subjt:  KLQDSAIDSSEKKMENSLLCKVLTSKKISPEIFSLKMSRIWNQEHTI-IEQVGFNVFLCKFKNARVKGRVIEEGPWFFDKAMLLFEEPKADIHAEDMEF-

Query:  -----------------RTLALEIGSLLGKVDKVD
                         R + L +G L+G+V ++D
Subjt:  -----------------RTLALEIGSLLGKVDKVD

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]1.2e-0829.31Show/hide
Query:  KVTEAEKACVFKLQDSAIDSSEKKMENSLLCKVLTSKKISPEIFSLKMSRIWNQEHTI--IEQVGFNVFLCKFKNARVKGRVIEEGPWFFDKAMLLFEEP
        K+T  E      +  SA++ + K +E SL+CK+L+ + IS  +    +   W  +     ++ +GFN+FL  F  +  + R++  GPW FD+A+++ + P
Subjt:  KVTEAEKACVFKLQDSAIDSSEKKMENSLLCKVLTSKKISPEIFSLKMSRIWNQEHTI--IEQVGFNVFLCKFKNARVKGRVIEEGPWFFDKAMLLFEEP

Query:  KADIHAEDMEFRTLAL
         +     DM+FR ++L
Subjt:  KADIHAEDMEFRTLAL

XP_022143536.1 uncharacterized protein LOC111013413 [Momordica charantia]3.6e-1841.03Show/hide
Query:  LSKRLAAMKVTEAEKACVFKLQDSAIDSSEKKMENSLLCKVLTSKKISPEIFSLKMSRIWNQEHTIIEQVGFNVFLCKFKNARVKGRVIEEGPWFFDKAM
        LS+++  +K+T+ EK  +F + +  I+  +K+ + SL+CK+LT K I  E+F   M RIW   +  IE VG N+FLCKFK  R K +++  GP FFDK+M
Subjt:  LSKRLAAMKVTEAEKACVFKLQDSAIDSSEKKMENSLLCKVLTSKKISPEIFSLKMSRIWNQEHTIIEQVGFNVFLCKFKNARVKGRVIEEGPWFFDKAM

Query:  LLFEEPKADIHAEDMEF
        ++ EEP+A+ +  ++E+
Subjt:  LLFEEPKADIHAEDMEF

XP_022154990.1 uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]2.1e-1840.48Show/hide
Query:  LSKRLAAMKVTEAEK--------ACVFKLQDSAIDSSEKKMENSLLCKVLTSKKISPEIFSLKMSRIWNQEHTIIEQVGFNVFLCKFKNARVKGRVIEEG
        LS+ +  +K+T+ EK          +F + +  I+  +K+ + SL+CK+LT K I  E+F   M RIW   +  IE VG N+FLCKFK  R K +++  G
Subjt:  LSKRLAAMKVTEAEK--------ACVFKLQDSAIDSSEKKMENSLLCKVLTSKKISPEIFSLKMSRIWNQEHTIIEQVGFNVFLCKFKNARVKGRVIEEG

Query:  PWFFDKAMLLFEEPKADIHAEDMEFR
        PWFFDK+M++ EEP+A+ +  ++EFR
Subjt:  PWFFDKAMLLFEEPKADIHAEDMEFR

XP_022154991.1 uncharacterized protein LOC111022134 isoform X2 [Momordica charantia]5.6e-1940.94Show/hide
Query:  LSKRLAAMKVTEAEK--------ACVFKLQDSAIDSSEKKMENSLLCKVLTSKKISPEIFSLKMSRIWNQEHTIIEQVGFNVFLCKFKNARVKGRVIEEG
        LS+ +  +K+T+ EK          +F + +  I+  +K+ + SL+CK+LT K I  E+F   M RIW   +  IE VG N+FLCKFK  R K +++  G
Subjt:  LSKRLAAMKVTEAEK--------ACVFKLQDSAIDSSEKKMENSLLCKVLTSKKISPEIFSLKMSRIWNQEHTIIEQVGFNVFLCKFKNARVKGRVIEEG

Query:  PWFFDKAMLLFEEPKADIHAEDMEFRT
        PWFFDK+M++ EEP+A+ +  ++EFRT
Subjt:  PWFFDKAMLLFEEPKADIHAEDMEFRT

TrEMBL top hitse value%identityAlignment
A0A5C7H9Y2 CCHC-type domain-containing protein9.7e-0928.15Show/hide
Query:  KLQDSAIDSSEKKMENSLLCKVLTSKKISPEIFSLKMSRIWNQEHTI-IEQVGFNVFLCKFKNARVKGRVIEEGPWFFDKAMLLFEEPKADIHAEDMEF-
        +++ S  +  E+ +  SL+ K +T+K I+ E F   +S IW  ++ + +E +G N+F  +F+N   + R++E GPW FDK +L+  E        D++F 
Subjt:  KLQDSAIDSSEKKMENSLLCKVLTSKKISPEIFSLKMSRIWNQEHTI-IEQVGFNVFLCKFKNARVKGRVIEEGPWFFDKAMLLFEEPKADIHAEDMEF-

Query:  -----------------RTLALEIGSLLGKVDKVD
                         R + L +G L+G+V ++D
Subjt:  -----------------RTLALEIGSLLGKVDKVD

A0A6J1BSZ1 uncharacterized protein LOC1110054815.7e-0929.31Show/hide
Query:  KVTEAEKACVFKLQDSAIDSSEKKMENSLLCKVLTSKKISPEIFSLKMSRIWNQEHTI--IEQVGFNVFLCKFKNARVKGRVIEEGPWFFDKAMLLFEEP
        K+T  E      +  SA++ + K +E SL+CK+L+ + IS  +    +   W  +     ++ +GFN+FL  F  +  + R++  GPW FD+A+++ + P
Subjt:  KVTEAEKACVFKLQDSAIDSSEKKMENSLLCKVLTSKKISPEIFSLKMSRIWNQEHTI--IEQVGFNVFLCKFKNARVKGRVIEEGPWFFDKAMLLFEEP

Query:  KADIHAEDMEFRTLAL
         +     DM+FR ++L
Subjt:  KADIHAEDMEFRTLAL

A0A6J1CQJ5 uncharacterized protein LOC1110134131.8e-1841.03Show/hide
Query:  LSKRLAAMKVTEAEKACVFKLQDSAIDSSEKKMENSLLCKVLTSKKISPEIFSLKMSRIWNQEHTIIEQVGFNVFLCKFKNARVKGRVIEEGPWFFDKAM
        LS+++  +K+T+ EK  +F + +  I+  +K+ + SL+CK+LT K I  E+F   M RIW   +  IE VG N+FLCKFK  R K +++  GP FFDK+M
Subjt:  LSKRLAAMKVTEAEKACVFKLQDSAIDSSEKKMENSLLCKVLTSKKISPEIFSLKMSRIWNQEHTIIEQVGFNVFLCKFKNARVKGRVIEEGPWFFDKAM

Query:  LLFEEPKADIHAEDMEF
        ++ EEP+A+ +  ++E+
Subjt:  LLFEEPKADIHAEDMEF

A0A6J1DL64 uncharacterized protein LOC111022134 isoform X11.0e-1840.48Show/hide
Query:  LSKRLAAMKVTEAEK--------ACVFKLQDSAIDSSEKKMENSLLCKVLTSKKISPEIFSLKMSRIWNQEHTIIEQVGFNVFLCKFKNARVKGRVIEEG
        LS+ +  +K+T+ EK          +F + +  I+  +K+ + SL+CK+LT K I  E+F   M RIW   +  IE VG N+FLCKFK  R K +++  G
Subjt:  LSKRLAAMKVTEAEK--------ACVFKLQDSAIDSSEKKMENSLLCKVLTSKKISPEIFSLKMSRIWNQEHTIIEQVGFNVFLCKFKNARVKGRVIEEG

Query:  PWFFDKAMLLFEEPKADIHAEDMEFR
        PWFFDK+M++ EEP+A+ +  ++EFR
Subjt:  PWFFDKAMLLFEEPKADIHAEDMEFR

A0A6J1DQC9 uncharacterized protein LOC111022134 isoform X22.7e-1940.94Show/hide
Query:  LSKRLAAMKVTEAEK--------ACVFKLQDSAIDSSEKKMENSLLCKVLTSKKISPEIFSLKMSRIWNQEHTIIEQVGFNVFLCKFKNARVKGRVIEEG
        LS+ +  +K+T+ EK          +F + +  I+  +K+ + SL+CK+LT K I  E+F   M RIW   +  IE VG N+FLCKFK  R K +++  G
Subjt:  LSKRLAAMKVTEAEK--------ACVFKLQDSAIDSSEKKMENSLLCKVLTSKKISPEIFSLKMSRIWNQEHTIIEQVGFNVFLCKFKNARVKGRVIEEG

Query:  PWFFDKAMLLFEEPKADIHAEDMEFRT
        PWFFDK+M++ EEP+A+ +  ++EFRT
Subjt:  PWFFDKAMLLFEEPKADIHAEDMEFRT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAAGATTGCACAAAAGGAAGAAAATGAGAAGAATCTCCAGGGTTTCAAATTTCTTTTAAAGAACAAGAGTCTTTTCCTTGGAAATGAAAAGATTCACCTCTACAT
TTATATTGATCATCAAGCACCAGAACATCAACCTACTGCATTACAGAGACCTCTTGATGCTGTAGAAGATAGAAGACTAGGATTTCTTTTGTGGAATGGTGGTGCCAGCA
AAGGGTCGAAGATGAAGGAGCAAGGTTATAGTGGGGAGGGACGGTTGCAAATGACGGTGACGGTTGCATCTTGCAAGTGGTTAAGGGAGAAAAACACAACGGTGGAAGGC
GGCGAGAGAAGAATCTTCGGTGCAGCTTGGTCTGCAAGCGGGAATCAGTGTTGGTGTGGTTCCATGGACGATGCAAAGGATGCATATGCGTTATCCAAACGCTTGGCGGC
CATGAAAGTTACAGAGGCCGAAAAAGCCTGTGTTTTCAAATTACAAGATAGTGCTATTGATAGTTCGGAGAAAAAAATGGAGAATTCTCTGTTGTGCAAAGTTCTTACGT
CCAAAAAAATCAGTCCAGAGATTTTTTCCTTGAAGATGTCGAGGATATGGAATCAGGAACATACGATTATTGAACAAGTGGGCTTCAACGTGTTTTTATGCAAATTCAAG
AATGCGAGGGTGAAAGGACGTGTTATAGAAGAGGGACCTTGGTTCTTTGACAAAGCGATGTTACTTTTTGAGGAGCCCAAAGCTGACATTCACGCGGAGGACATGGAATT
CAGGACTTTGGCTTTGGAGATAGGCAGTTTGCTTGGGAAAGTGGACAAAGTGGACATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAAAGATTGCACAAAAGGAAGAAAATGAGAAGAATCTCCAGGGTTTCAAATTTCTTTTAAAGAACAAGAGTCTTTTCCTTGGAAATGAAAAGATTCACCTCTACAT
TTATATTGATCATCAAGCACCAGAACATCAACCTACTGCATTACAGAGACCTCTTGATGCTGTAGAAGATAGAAGACTAGGATTTCTTTTGTGGAATGGTGGTGCCAGCA
AAGGGTCGAAGATGAAGGAGCAAGGTTATAGTGGGGAGGGACGGTTGCAAATGACGGTGACGGTTGCATCTTGCAAGTGGTTAAGGGAGAAAAACACAACGGTGGAAGGC
GGCGAGAGAAGAATCTTCGGTGCAGCTTGGTCTGCAAGCGGGAATCAGTGTTGGTGTGGTTCCATGGACGATGCAAAGGATGCATATGCGTTATCCAAACGCTTGGCGGC
CATGAAAGTTACAGAGGCCGAAAAAGCCTGTGTTTTCAAATTACAAGATAGTGCTATTGATAGTTCGGAGAAAAAAATGGAGAATTCTCTGTTGTGCAAAGTTCTTACGT
CCAAAAAAATCAGTCCAGAGATTTTTTCCTTGAAGATGTCGAGGATATGGAATCAGGAACATACGATTATTGAACAAGTGGGCTTCAACGTGTTTTTATGCAAATTCAAG
AATGCGAGGGTGAAAGGACGTGTTATAGAAGAGGGACCTTGGTTCTTTGACAAAGCGATGTTACTTTTTGAGGAGCCCAAAGCTGACATTCACGCGGAGGACATGGAATT
CAGGACTTTGGCTTTGGAGATAGGCAGTTTGCTTGGGAAAGTGGACAAAGTGGACATTTAG
Protein sequenceShow/hide protein sequence
MRKIAQKEENEKNLQGFKFLLKNKSLFLGNEKIHLYIYIDHQAPEHQPTALQRPLDAVEDRRLGFLLWNGGASKGSKMKEQGYSGEGRLQMTVTVASCKWLREKNTTVEG
GERRIFGAAWSASGNQCWCGSMDDAKDAYALSKRLAAMKVTEAEKACVFKLQDSAIDSSEKKMENSLLCKVLTSKKISPEIFSLKMSRIWNQEHTIIEQVGFNVFLCKFK
NARVKGRVIEEGPWFFDKAMLLFEEPKADIHAEDMEFRTLALEIGSLLGKVDKVDI