; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0031876 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031876
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr11:17589600..17590976
RNA-Seq ExpressionLag0031876
SyntenyLag0031876
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5443558.1 hypothetical protein F2P56_036105, partial [Juglans regia]5.6e-2337.13Show/hide
Query:  RLNYSGYFVVNRVGLSGGLCMLWKDE----------------------------DIYEQPDSSLRSYTWQLIRHLYNFGNEAWVIGGDLNEILWDNEKAG
        RL+ +  F V+ VG SGGL +LWK +                             +Y  P+   R  TW L+R L +  +  W++GGD NE+L  NEK G
Subjt:  RLNYSGYFVVNRVGLSGGLCMLWKDE----------------------------DIYEQPDSSLRSYTWQLIRHLYNFGNEAWVIGGDLNEILWDNEKAG

Query:  GPSRDHRLMTDFREALDDYNLMDLGFSSSSFTWCNRREKDAQMWLRLDRFIGNSKFCSLFPYHIVLH
        G  R    M  FR  + D +L DLGF    +TWCN R     +  RLDRF+GN++FC+LFP  +V H
Subjt:  GPSRDHRLMTDFREALDDYNLMDLGFSSSSFTWCNRREKDAQMWLRLDRFIGNSKFCSLFPYHIVLH

KAG2725981.1 hypothetical protein I3760_01G090600 [Carya illinoinensis]7.9e-2539.87Show/hide
Query:  QARLNYSGYFVVNRVGLSGGLCMLWKDE------------DIYEQPDSSLRSYTWQLIRHLYNFGNEAWVIGGDLNEILWDNEKAGGPSRDHRLMTDFRE
        + R+ +   F V+  G  GG+ +LWK E             +Y  P++  R  TW L+R L   GN  W++ GD NE+L   EK GG  R  RLM  FR 
Subjt:  QARLNYSGYFVVNRVGLSGGLCMLWKDE------------DIYEQPDSSLRSYTWQLIRHLYNFGNEAWVIGGDLNEILWDNEKAGGPSRDHRLMTDFRE

Query:  ALDDYNLMDLGFSSSSFTWCNRREKDAQMWLRLDRFIGNSKFCSLFPYHIVLH
         +DD NL+DLGF    +TWCNRR +D  +  RLDRFI    + + FP+  V+H
Subjt:  ALDDYNLMDLGFSSSSFTWCNRREKDAQMWLRLDRFIGNSKFCSLFPYHIVLH

XP_041001573.1 uncharacterized protein LOC121247264 [Juglans microcarpa x Juglans regia]8.7e-2439.52Show/hide
Query:  RLNYSGYFVVNRVGLSGGLCMLW--------------------KDEDIYE--------QPDSSLRSYTWQLIRHLYNFGNEAWVIGGDLNEILWDNEKAG
        +L ++  F ++ VG SGGL ++W                    K ED++E         P+ S R  TW LIR L +     W++GG+ NE+L  +EK G
Subjt:  RLNYSGYFVVNRVGLSGGLCMLW--------------------KDEDIYE--------QPDSSLRSYTWQLIRHLYNFGNEAWVIGGDLNEILWDNEKAG

Query:  GPSRDHRLMTDFREALDDYNLMDLGFSSSSFTWCNRREKDAQMWLRLDRFIGNSKFCSLFPYHIVLH
        G  R    +  FRE L D NL DLGF    FTW N RE D  +  RLDR++GNS FC LFP  +VLH
Subjt:  GPSRDHRLMTDFREALDDYNLMDLGFSSSSFTWCNRREKDAQMWLRLDRFIGNSKFCSLFPYHIVLH

XP_042954578.1 uncharacterized protein LOC122290989 [Carya illinoinensis]1.3e-2237.5Show/hide
Query:  LNYSGYFVVNRVGLSGGLCMLWKDEDI-----------------------------YEQPDSSLRSYTWQLIRHLYNFGNEAWVIGGDLNEILWDNEKAG
        LN+ G  V   VG SGGL ++WK +D+                             Y  P++SLR YTW L+   +  G E WV+ GD NEIL++NEKAG
Subjt:  LNYSGYFVVNRVGLSGGLCMLWKDEDI-----------------------------YEQPDSSLRSYTWQLIRHLYNFGNEAWVIGGDLNEILWDNEKAG

Query:  GPSRDHRLMTDFREALDDYNLMDLGFSSSSFTWCNRREKDAQMWLRLDRFIGNSKFCSLF
        G  R   LM  F++ L++ NL DLG+  + FTWCN  E ++    RLDR + NS++ + +
Subjt:  GPSRDHRLMTDFREALDDYNLMDLGFSSSSFTWCNRREKDAQMWLRLDRFIGNSKFCSLF

XP_042958111.1 uncharacterized protein LOC122293658 [Carya illinoinensis]1.3e-2237.5Show/hide
Query:  LNYSGYFVVNRVGLSGGLCMLWKDE------------------------------DIYEQPDSSLRSYTWQLIRHLYNFGNEAWVIGGDLNEILWDNEKA
        L +   FVV+  G SGGL MLWKD+                               +Y  P +  R   W +++ L       W++ GD NEIL  +EK 
Subjt:  LNYSGYFVVNRVGLSGGLCMLWKDE------------------------------DIYEQPDSSLRSYTWQLIRHLYNFGNEAWVIGGDLNEILWDNEKA

Query:  GGPSRDHRLMTDFREALDDYNLMDLGFSSSSFTWCNRREKDAQMWLRLDRFIGNSKFCSLFPYHIVLH
        GG  R  R M  FR  L++  L DLGFS   FTWCNRRE D  +  RLDRF+GN  +C  FP+  V H
Subjt:  GGPSRDHRLMTDFREALDDYNLMDLGFSSSSFTWCNRREKDAQMWLRLDRFIGNSKFCSLFPYHIVLH

TrEMBL top hitse value%identityAlignment
A0A2I4EB36 uncharacterized protein LOC1089879803.9e-2236.9Show/hide
Query:  QARLNYSGYFVVNRVGLSGGLCMLWK-------------------DED--------IYEQPDSSLRSYTWQLIRHLYNFGNEAWVIGGDLNEILWDNEKA
        + +L ++    V+  G SGGL +LWK                   +ED        IY QP +S R  TW LIR L    ++ W++ GD NEI    EK 
Subjt:  QARLNYSGYFVVNRVGLSGGLCMLWK-------------------DED--------IYEQPDSSLRSYTWQLIRHLYNFGNEAWVIGGDLNEILWDNEKA

Query:  GGPSRDHRLMTDFREALDDYNLMDLGFSSSSFTWCNRREKDAQMWLRLDRFIGNSKFCSLFPYHIVLH
        GG +R  + M DF + L D NL D+GFSS  +TWCN+RE  A +  RL++F+GN  +C++F    + H
Subjt:  GGPSRDHRLMTDFREALDDYNLMDLGFSSSSFTWCNRREKDAQMWLRLDRFIGNSKFCSLFPYHIVLH

A0A2N9EK24 CCHC-type domain-containing protein3.9e-2236.09Show/hide
Query:  QARLNYSGYFVVNRVGLSGGLCMLWKDE----------------------------DIYEQPDSSLRSYTWQLIRHLYNFGNEAWVIGGDLNEILWDNEK
        + RL   G F V+R G  GGL ++W D+                              Y QPD+S R  +W L+RHL+      W++ GDLNEI+ ++E 
Subjt:  QARLNYSGYFVVNRVGLSGGLCMLWKDE----------------------------DIYEQPDSSLRSYTWQLIRHLYNFGNEAWVIGGDLNEILWDNEK

Query:  AGGPSRDHRLMTDFREALDDYNLMDLGFSSSSFTWCNRREKDAQMWLRLDRFIGNSKFCSLFPYHIVLH
         G   R    M  FR+ALDD NL D+GF+   FTWCNRR    ++  RLDR +   ++ S+FP   V H
Subjt:  AGGPSRDHRLMTDFREALDDYNLMDLGFSSSSFTWCNRREKDAQMWLRLDRFIGNSKFCSLFPYHIVLH

A0A2N9GTH1 CCHC-type domain-containing protein1.1e-2137.28Show/hide
Query:  QARLNYSGYFVVNRVGLSGGLCMLWKDE----------------------------DIYEQPDSSLRSYTWQLIRHLYNFGNEAWVIGGDLNEILWDNEK
        + RL  SGY  V+R GL GGL +LW                                 Y  P+  LR  +W L+RHL+   N  W++ GD NEI   NE+
Subjt:  QARLNYSGYFVVNRVGLSGGLCMLWKDE----------------------------DIYEQPDSSLRSYTWQLIRHLYNFGNEAWVIGGDLNEILWDNEK

Query:  AGGPSRDHRLMTDFREALDDYNLMDLGFSSSSFTWCNRREKDAQMWLRLDRFIGNSKFCSLFPYHIVLH
         G   R+   M  FREAL D  L DLGF  ++FTW NRR     + +RLDR + N+++ SLFP   V H
Subjt:  AGGPSRDHRLMTDFREALDDYNLMDLGFSSSSFTWCNRREKDAQMWLRLDRFIGNSKFCSLFPYHIVLH

A0A5B7BGF4 Endo/exonuclease/phosphatase domain-containing protein6.7e-2236.69Show/hide
Query:  QARLNYSGYFVVNRVGLSGGLCMLWKDEDI----------------------------YEQPDSSLRSYTWQLIRHLYNFGNEAWVIGGDLNEILWDNEK
        ++++ +     V+  G SGGLC+LW+D ++                            Y  PD+S RS +W L+R L    +  W+  GD NEIL D+EK
Subjt:  QARLNYSGYFVVNRVGLSGGLCMLWKDEDI----------------------------YEQPDSSLRSYTWQLIRHLYNFGNEAWVIGGDLNEILWDNEK

Query:  AGGPSRDHRLMTDFREALDDYNLMDLGFSSSSFTWCNRREKDAQMWLRLDRFIGNSKFCSLFPYHIVLH
         G  SRD   M DFR+ LDD    DLGF  + FTWCNRR+ +A +  RLDR I  + +C  F    V H
Subjt:  AGGPSRDHRLMTDFREALDDYNLMDLGFSSSSFTWCNRREKDAQMWLRLDRFIGNSKFCSLFPYHIVLH

A0A5C7IIT4 Uncharacterized protein2.0e-2135.5Show/hide
Query:  RLNYSGYFVVNRVGLSGGLCMLWKDE----------------------------DIYEQPDSSLRSYTWQLIRHLYNFGNEAWVIGGDLNEILWDNEKAG
        +L +    VV+R G SGGLC+LWK E                              Y  P+ + R + W L+R L       W +GGD NEI+  +EK G
Subjt:  RLNYSGYFVVNRVGLSGGLCMLWKDE----------------------------DIYEQPDSSLRSYTWQLIRHLYNFGNEAWVIGGDLNEILWDNEKAG

Query:  GPSRDHRLMTDFREALDDYNLMDLGFSSSSFTWCNRREKDAQMWLRLDRFIGNSKFCSLFPYHIVLHQD
        G +R    M +F+EAL+D  L DLGF    FTW NRR+ +  +  RLDR +GN+ +  LF    + H D
Subjt:  GPSRDHRLMTDFREALDDYNLMDLGFSSSSFTWCNRREKDAQMWLRLDRFIGNSKFCSLFPYHIVLHQD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGAAATTCTGGGGAGGCAACACGGCTCTTGCTCGACCTTGGTTGTCGGAAAGCTCGGGTCCGGCGTATCTCCGAGAGTCTGGAATGCCTTTTGGGTCGTCATT
AATGGCCCAAGGCGTTATAAACCCTGCGGTATTTAAAGCTCCTTCGGTGAATTCATTATTCAATCTGACAGTTGGGTCAACTAGCAATAATGAAGGTCTGGATGACATTA
TTGCGCGTTGTAATCGGCGATTATCACGACAGATACTTGAAATTTTAAATGGGCCCACTTCTAAAGATGAACAGTCGTCCGTTGAAGGTGATTCAGTGGAGTCATTTCTG
TCTAAGGTTGCTGACGAGGATGGGCCCCTCTCTGAGGATAGTCAACGGATCCATGATGTTGTTGTGGATTCGAAGGACCACAAGGAGTTCCGAAAGCAAAAGGACGAGTC
GATTCTACTGTCACCTGATAATATCAAACGTCTGAAGGTGGAAGGGGAGTCTACTTTTGAGGCGGGGATTGCTGGGCAGCCCCGCCAGGCACGTTTGAATTATTCTGGCT
ATTTTGTTGTCAATAGAGTTGGGTTGAGTGGTGGTCTTTGCATGCTTTGGAAAGATGAGGATATATATGAGCAACCTGATTCCAGTTTGCGATCTTACACTTGGCAACTT
ATTCGTCACTTATATAACTTTGGTAACGAGGCGTGGGTAATTGGTGGAGATCTTAATGAGATTCTTTGGGATAATGAAAAGGCTGGAGGCCCTTCGAGGGATCATCGGTT
GATGACAGATTTTAGGGAGGCATTGGACGACTATAATCTCATGGACCTGGGTTTCTCCAGTAGTTCATTTACTTGGTGCAACAGGCGAGAAAAAGATGCCCAAATGTGGC
TAAGACTGGATCGGTTTATTGGAAATTCTAAATTCTGTTCGCTATTTCCATATCATATAGTTCTGCATCAAGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGATGAAATTCTGGGGAGGCAACACGGCTCTTGCTCGACCTTGGTTGTCGGAAAGCTCGGGTCCGGCGTATCTCCGAGAGTCTGGAATGCCTTTTGGGTCGTCATT
AATGGCCCAAGGCGTTATAAACCCTGCGGTATTTAAAGCTCCTTCGGTGAATTCATTATTCAATCTGACAGTTGGGTCAACTAGCAATAATGAAGGTCTGGATGACATTA
TTGCGCGTTGTAATCGGCGATTATCACGACAGATACTTGAAATTTTAAATGGGCCCACTTCTAAAGATGAACAGTCGTCCGTTGAAGGTGATTCAGTGGAGTCATTTCTG
TCTAAGGTTGCTGACGAGGATGGGCCCCTCTCTGAGGATAGTCAACGGATCCATGATGTTGTTGTGGATTCGAAGGACCACAAGGAGTTCCGAAAGCAAAAGGACGAGTC
GATTCTACTGTCACCTGATAATATCAAACGTCTGAAGGTGGAAGGGGAGTCTACTTTTGAGGCGGGGATTGCTGGGCAGCCCCGCCAGGCACGTTTGAATTATTCTGGCT
ATTTTGTTGTCAATAGAGTTGGGTTGAGTGGTGGTCTTTGCATGCTTTGGAAAGATGAGGATATATATGAGCAACCTGATTCCAGTTTGCGATCTTACACTTGGCAACTT
ATTCGTCACTTATATAACTTTGGTAACGAGGCGTGGGTAATTGGTGGAGATCTTAATGAGATTCTTTGGGATAATGAAAAGGCTGGAGGCCCTTCGAGGGATCATCGGTT
GATGACAGATTTTAGGGAGGCATTGGACGACTATAATCTCATGGACCTGGGTTTCTCCAGTAGTTCATTTACTTGGTGCAACAGGCGAGAAAAAGATGCCCAAATGTGGC
TAAGACTGGATCGGTTTATTGGAAATTCTAAATTCTGTTCGCTATTTCCATATCATATAGTTCTGCATCAAGATTAG
Protein sequenceShow/hide protein sequence
MAMKFWGGNTALARPWLSESSGPAYLRESGMPFGSSLMAQGVINPAVFKAPSVNSLFNLTVGSTSNNEGLDDIIARCNRRLSRQILEILNGPTSKDEQSSVEGDSVESFL
SKVADEDGPLSEDSQRIHDVVVDSKDHKEFRKQKDESILLSPDNIKRLKVEGESTFEAGIAGQPRQARLNYSGYFVVNRVGLSGGLCMLWKDEDIYEQPDSSLRSYTWQL
IRHLYNFGNEAWVIGGDLNEILWDNEKAGGPSRDHRLMTDFREALDDYNLMDLGFSSSSFTWCNRREKDAQMWLRLDRFIGNSKFCSLFPYHIVLHQD