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Lag0031885 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031885
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr11:17836006..17836624
RNA-Seq ExpressionLag0031885
SyntenyLag0031885
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143495.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia]1.1e-1843.48Show/hide
Query:  MIRVQKREKDRRLARFESREPEYGEKFIPHLYHSFESAGIIR---PGDFAVAVVTKE-EEFGPWIYPCPENFELNNWSTIELRHLLLRCQRQIFTLLFFF
        +IRV+  EK +RL+RFE+ E +Y  + +P L HSF SAG I     G   VA VT+E E+  P++YPCP+ FEL+NWS                      
Subjt:  MIRVQKREKDRRLARFESREPEYGEKFIPHLYHSFESAGIIR---PGDFAVAVVTKE-EEFGPWIYPCPENFELNNWSTIELRHLLLRCQRQIFTLLFFF

Query:  FQIINILSSNTEIECANDSQYELDIPIHNVESDEEEED
                 NTEIEC NDS+YELD PI+N+ESD+E +D
Subjt:  FQIINILSSNTEIECANDSQYELDIPIHNVESDEEEED
XP_022147181.1 uncharacterized protein LOC111016192 [Momordica charantia]5.2e-2146.38Show/hide
Query:  MIRVQKREKDRRLARFESREPEYGEKFIPHLYHSFESAGIIR---PGDFAVAVVTKE-EEFGPWIYPCPENFELNNWSTIELRHLLLRCQRQIFTLLFFF
        +IRV   EK +RL+RFE+ E +Y  + +P L HSF SAGII         VA VT+E E+ GP++YPCP+ FEL+NWS +EL                  
Subjt:  MIRVQKREKDRRLARFESREPEYGEKFIPHLYHSFESAGIIR---PGDFAVAVVTKE-EEFGPWIYPCPENFELNNWSTIELRHLLLRCQRQIFTLLFFF

Query:  FQIINILSSNTEIECANDSQYELDIPIHNVESDEEEED
           +N  S+  EIEC NDS+YELD PI+N+ESDEE +D
Subjt:  FQIINILSSNTEIECANDSQYELDIPIHNVESDEEEED
XP_022147189.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]2.0e-2045.65Show/hide
Query:  MIRVQKREKDRRLARFESREPEYGEKFIPHLYHSFESAGIIR---PGDFAVAVVTKE-EEFGPWIYPCPENFELNNWSTIELRHLLLRCQRQIFTLLFFF
        +IRV+  EK +RL+RFE+ E +Y  + +P L HSF SAG I         VA VT+E E+ GP++Y CP+ FEL+NWS I+L                  
Subjt:  MIRVQKREKDRRLARFESREPEYGEKFIPHLYHSFESAGIIR---PGDFAVAVVTKE-EEFGPWIYPCPENFELNNWSTIELRHLLLRCQRQIFTLLFFF

Query:  FQIINILSSNTEIECANDSQYELDIPIHNVESDEEEED
           +N  S+NTEIEC NDS+YELD PI+ +ESDEE +D
Subjt:  FQIINILSSNTEIECANDSQYELDIPIHNVESDEEEED
XP_022150030.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111018303 [Momordica charantia]1.6e-1740.58Show/hide
Query:  MIRVQKREKDRRLARFESREPEYGEKFIPHLYHSFESAGIIR----PGDFAVAVVTKEEEFGPWIYPCPENFELNNWSTIELRHLLLRCQRQIFTLLFFF
        +IRV+  EK +RL+RFE+ E +Y  + +P L HS  SAG I         A AV  + E+  P++YPCP+ F+L+NWS                      
Subjt:  MIRVQKREKDRRLARFESREPEYGEKFIPHLYHSFESAGIIR----PGDFAVAVVTKEEEFGPWIYPCPENFELNNWSTIELRHLLLRCQRQIFTLLFFF

Query:  FQIINILSSNTEIECANDSQYELDIPIHNVESDEEEED
                 NTEIEC NDS+YELD PI+N+ESDEE +D
Subjt:  FQIINILSSNTEIECANDSQYELDIPIHNVESDEEEED
XP_022155744.1 uncharacterized protein LOC111022791 [Momordica charantia]2.9e-1150Show/hide
Query:  MIRVQKREKDRRLARFESREPEYGEKFIPHLYHSFESAGIIR---PGDFAVAVVTKE-EEFGPWIYPCPENFELNNWSTIEL
        +IRV+  EK +RL+RFE+ E +Y  + +P L HSF SAG I         VA VT+E E+ GP++Y CP+ FEL+NWS IEL
Subjt:  MIRVQKREKDRRLARFESREPEYGEKFIPHLYHSFESAGIIR---PGDFAVAVVTKE-EEFGPWIYPCPENFELNNWSTIEL
TrEMBL top hitse value%identityAlignment
A0A6J1CNY7 Ribonuclease H5.3e-1943.48Show/hide
Query:  MIRVQKREKDRRLARFESREPEYGEKFIPHLYHSFESAGIIR---PGDFAVAVVTKE-EEFGPWIYPCPENFELNNWSTIELRHLLLRCQRQIFTLLFFF
        +IRV+  EK +RL+RFE+ E +Y  + +P L HSF SAG I     G   VA VT+E E+  P++YPCP+ FEL+NWS                      
Subjt:  MIRVQKREKDRRLARFESREPEYGEKFIPHLYHSFESAGIIR---PGDFAVAVVTKE-EEFGPWIYPCPENFELNNWSTIELRHLLLRCQRQIFTLLFFF

Query:  FQIINILSSNTEIECANDSQYELDIPIHNVESDEEEED
                 NTEIEC NDS+YELD PI+N+ESD+E +D
Subjt:  FQIINILSSNTEIECANDSQYELDIPIHNVESDEEEED
A0A6J1D099 Ribonuclease H9.6e-2145.65Show/hide
Query:  MIRVQKREKDRRLARFESREPEYGEKFIPHLYHSFESAGIIR---PGDFAVAVVTKE-EEFGPWIYPCPENFELNNWSTIELRHLLLRCQRQIFTLLFFF
        +IRV+  EK +RL+RFE+ E +Y  + +P L HSF SAG I         VA VT+E E+ GP++Y CP+ FEL+NWS I+L                  
Subjt:  MIRVQKREKDRRLARFESREPEYGEKFIPHLYHSFESAGIIR---PGDFAVAVVTKE-EEFGPWIYPCPENFELNNWSTIELRHLLLRCQRQIFTLLFFF

Query:  FQIINILSSNTEIECANDSQYELDIPIHNVESDEEEED
           +N  S+NTEIEC NDS+YELD PI+ +ESDEE +D
Subjt:  FQIINILSSNTEIECANDSQYELDIPIHNVESDEEEED
A0A6J1D1K4 uncharacterized protein LOC1110161922.5e-2146.38Show/hide
Query:  MIRVQKREKDRRLARFESREPEYGEKFIPHLYHSFESAGIIR---PGDFAVAVVTKE-EEFGPWIYPCPENFELNNWSTIELRHLLLRCQRQIFTLLFFF
        +IRV   EK +RL+RFE+ E +Y  + +P L HSF SAGII         VA VT+E E+ GP++YPCP+ FEL+NWS +EL                  
Subjt:  MIRVQKREKDRRLARFESREPEYGEKFIPHLYHSFESAGIIR---PGDFAVAVVTKE-EEFGPWIYPCPENFELNNWSTIELRHLLLRCQRQIFTLLFFF

Query:  FQIINILSSNTEIECANDSQYELDIPIHNVESDEEEED
           +N  S+  EIEC NDS+YELD PI+N+ESDEE +D
Subjt:  FQIINILSSNTEIECANDSQYELDIPIHNVESDEEEED
A0A6J1D7C7 Ribonuclease H7.6e-1840.58Show/hide
Query:  MIRVQKREKDRRLARFESREPEYGEKFIPHLYHSFESAGIIR----PGDFAVAVVTKEEEFGPWIYPCPENFELNNWSTIELRHLLLRCQRQIFTLLFFF
        +IRV+  EK +RL+RFE+ E +Y  + +P L HS  SAG I         A AV  + E+  P++YPCP+ F+L+NWS                      
Subjt:  MIRVQKREKDRRLARFESREPEYGEKFIPHLYHSFESAGIIR----PGDFAVAVVTKEEEFGPWIYPCPENFELNNWSTIELRHLLLRCQRQIFTLLFFF

Query:  FQIINILSSNTEIECANDSQYELDIPIHNVESDEEEED
                 NTEIEC NDS+YELD PI+N+ESDEE +D
Subjt:  FQIINILSSNTEIECANDSQYELDIPIHNVESDEEEED
A0A6J1DR66 uncharacterized protein LOC1110227911.4e-1150Show/hide
Query:  MIRVQKREKDRRLARFESREPEYGEKFIPHLYHSFESAGIIR---PGDFAVAVVTKE-EEFGPWIYPCPENFELNNWSTIEL
        +IRV+  EK +RL+RFE+ E +Y  + +P L HSF SAG I         VA VT+E E+ GP++Y CP+ FEL+NWS IEL
Subjt:  MIRVQKREKDRRLARFESREPEYGEKFIPHLYHSFESAGIIR---PGDFAVAVVTKE-EEFGPWIYPCPENFELNNWSTIEL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAGGGTACAGAAGCGAGAAAAAGATAGGCGTTTGGCCAGATTTGAAAGTCGTGAACCAGAATATGGGGAAAAATTCATCCCTCATCTCTACCATTCATTTGAAAG
TGCTGGTATAATTCGTCCAGGAGATTTTGCAGTTGCAGTAGTGACTAAAGAGGAAGAATTTGGTCCATGGATCTACCCGTGCCCAGAAAACTTCGAGCTCAACAATTGGA
GTACTATTGAATTACGTCATTTGCTGTTAAGATGTCAAAGGCAAATATTTACTCTTCTTTTCTTCTTTTTCCAAATTATCAACATCTTAAGCAGTAATACTGAGATTGAA
TGTGCAAACGATTCTCAATACGAACTTGATATTCCTATACACAATGTTGAGTCTGACGAGGAAGAAGAAGATTTGAACCTAGTGCTGAGTTGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATCAGGGTACAGAAGCGAGAAAAAGATAGGCGTTTGGCCAGATTTGAAAGTCGTGAACCAGAATATGGGGAAAAATTCATCCCTCATCTCTACCATTCATTTGAAAG
TGCTGGTATAATTCGTCCAGGAGATTTTGCAGTTGCAGTAGTGACTAAAGAGGAAGAATTTGGTCCATGGATCTACCCGTGCCCAGAAAACTTCGAGCTCAACAATTGGA
GTACTATTGAATTACGTCATTTGCTGTTAAGATGTCAAAGGCAAATATTTACTCTTCTTTTCTTCTTTTTCCAAATTATCAACATCTTAAGCAGTAATACTGAGATTGAA
TGTGCAAACGATTCTCAATACGAACTTGATATTCCTATACACAATGTTGAGTCTGACGAGGAAGAAGAAGATTTGAACCTAGTGCTGAGTTGTTAG
Protein sequenceShow/hide protein sequence
MIRVQKREKDRRLARFESREPEYGEKFIPHLYHSFESAGIIRPGDFAVAVVTKEEEFGPWIYPCPENFELNNWSTIELRHLLLRCQRQIFTLLFFFFQIINILSSNTEIE
CANDSQYELDIPIHNVESDEEEEDLNLVLSC