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Lag0031886 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031886
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr11:17862226..17862694
RNA-Seq ExpressionLag0031886
SyntenyLag0031886
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156662.1 uncharacterized protein LOC111023512 [Momordica charantia]5.1e-1048Show/hide
Query:  RRLEEFVALKQGSRTIDEYETKFARLSQFAPAMVTTEADKVERFITGLREKIQGSVVAHQPQDYATIVRVVELID
        R+  EF+ LKQ +R+++EY+ +F +LS+FAP +V TEA K ERFI  L+++ +G V    P DYAT +R   LID
Subjt:  RRLEEFVALKQGSRTIDEYETKFARLSQFAPAMVTTEADKVERFITGLREKIQGSVVAHQPQDYATIVRVVELID

XP_022937437.1 uncharacterized protein LOC111443845 [Cucurbita moschata]5.4e-1247.56Show/hide
Query:  EFVALKQGSRTIDEYETKFARLSQFAPAMVTTEADKVERFITGLREKIQGSVVAHQPQDYATIVRVVELIDRCLKVAPLESS
        EF++++QG+R+++EYE +F RLS+FAP MV+ E  KVE F+ GLR  I+G V+ H P DYAT +++ E +D  +K  P E +
Subjt:  EFVALKQGSRTIDEYETKFARLSQFAPAMVTTEADKVERFITGLREKIQGSVVAHQPQDYATIVRVVELIDRCLKVAPLESS

XP_022946901.1 uncharacterized protein LOC111450842 [Cucurbita moschata]5.1e-1050.75Show/hide
Query:  LKQGSRTIDEYETKFARLSQFAPAMVTTEADKVERFITGLREKIQGSVVAHQPQDYATIVRVVELID
        L+QG+R+++EYE +F RLS+F P MV TE +K + FI GLR++IQGSV AH  QD+ T       +D
Subjt:  LKQGSRTIDEYETKFARLSQFAPAMVTTEADKVERFITGLREKIQGSVVAHQPQDYATIVRVVELID

XP_022962669.1 uncharacterized protein LOC111463090 [Cucurbita moschata]6.0e-1148Show/hide
Query:  RRLEEFVALKQGSRTIDEYETKFARLSQFAPAMVTTEADKVERFITGLREKIQGSVVAHQPQDYATIVRVVELID
        R  + F+ L+QG+R+++EYE +F RLS+F P MV TE +K + FI GLR++IQGSV AH  QD+ T       +D
Subjt:  RRLEEFVALKQGSRTIDEYETKFARLSQFAPAMVTTEADKVERFITGLREKIQGSVVAHQPQDYATIVRVVELID

XP_038880159.1 uncharacterized protein LOC120071839 [Benincasa hispida]5.4e-1248.15Show/hide
Query:  FHRNRLSPHELSRRLEEFVALKQGSRTIDEYETKFARLSQFAPAMVTTEADKVERFITGLREKIQGSVVAHQPQDYATIVR
        F+    S H    +  EF+ LKQG+ T++EYE KF RLS FAP +V+TEA + ERF+ GLR++++G V A +P +YAT  R
Subjt:  FHRNRLSPHELSRRLEEFVALKQGSRTIDEYETKFARLSQFAPAMVTTEADKVERFITGLREKIQGSVVAHQPQDYATIVR

TrEMBL top hitse value%identityAlignment
A0A6J1DSJ6 uncharacterized protein LOC1110235122.5e-1048Show/hide
Query:  RRLEEFVALKQGSRTIDEYETKFARLSQFAPAMVTTEADKVERFITGLREKIQGSVVAHQPQDYATIVRVVELID
        R+  EF+ LKQ +R+++EY+ +F +LS+FAP +V TEA K ERFI  L+++ +G V    P DYAT +R   LID
Subjt:  RRLEEFVALKQGSRTIDEYETKFARLSQFAPAMVTTEADKVERFITGLREKIQGSVVAHQPQDYATIVRVVELID

A0A6J1FB78 uncharacterized protein LOC1114438452.6e-1247.56Show/hide
Query:  EFVALKQGSRTIDEYETKFARLSQFAPAMVTTEADKVERFITGLREKIQGSVVAHQPQDYATIVRVVELIDRCLKVAPLESS
        EF++++QG+R+++EYE +F RLS+FAP MV+ E  KVE F+ GLR  I+G V+ H P DYAT +++ E +D  +K  P E +
Subjt:  EFVALKQGSRTIDEYETKFARLSQFAPAMVTTEADKVERFITGLREKIQGSVVAHQPQDYATIVRVVELIDRCLKVAPLESS

A0A6J1FEV9 uncharacterized protein LOC1114450789.3e-1043.42Show/hide
Query:  EFVALKQGSRTIDEYETKFARLSQFAPAMVTTEADKVERFITGLREKIQGSVVAHQPQDYATIVRVVELIDRCLKV
        EF+ LKQG+ ++++Y+ +F RLS+FAP MV T++  V RF+ GLR+ I+G V      DYA+   V   +D C+ V
Subjt:  EFVALKQGSRTIDEYETKFARLSQFAPAMVTTEADKVERFITGLREKIQGSVVAHQPQDYATIVRVVELIDRCLKV

A0A6J1G4W3 uncharacterized protein LOC1114508422.5e-1050.75Show/hide
Query:  LKQGSRTIDEYETKFARLSQFAPAMVTTEADKVERFITGLREKIQGSVVAHQPQDYATIVRVVELID
        L+QG+R+++EYE +F RLS+F P MV TE +K + FI GLR++IQGSV AH  QD+ T       +D
Subjt:  LKQGSRTIDEYETKFARLSQFAPAMVTTEADKVERFITGLREKIQGSVVAHQPQDYATIVRVVELID

A0A6J1HHR1 uncharacterized protein LOC1114630902.9e-1148Show/hide
Query:  RRLEEFVALKQGSRTIDEYETKFARLSQFAPAMVTTEADKVERFITGLREKIQGSVVAHQPQDYATIVRVVELID
        R  + F+ L+QG+R+++EYE +F RLS+F P MV TE +K + FI GLR++IQGSV AH  QD+ T       +D
Subjt:  RRLEEFVALKQGSRTIDEYETKFARLSQFAPAMVTTEADKVERFITGLREKIQGSVVAHQPQDYATIVRVVELID

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATCTTCCATCGAAACCGTCTTTCGCCACATGAATTGTCCAGAAGGCTAGAAGAGTTTGTAGCTCTTAAGCAGGGGAGTCGAACTATAGATGAATACGAGACGAA
GTTCGCTAGACTGTCTCAATTTGCTCCTGCCATGGTAACTACGGAGGCTGATAAAGTGGAACGATTTATCACAGGCTTAAGAGAGAAGATACAAGGTAGCGTGGTAGCCC
ATCAACCACAAGATTATGCAACAATAGTGAGGGTGGTCGAGCTGATTGATCGTTGTTTGAAAGTTGCCCCTCTAGAATCTTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTATCTTCCATCGAAACCGTCTTTCGCCACATGAATTGTCCAGAAGGCTAGAAGAGTTTGTAGCTCTTAAGCAGGGGAGTCGAACTATAGATGAATACGAGACGAA
GTTCGCTAGACTGTCTCAATTTGCTCCTGCCATGGTAACTACGGAGGCTGATAAAGTGGAACGATTTATCACAGGCTTAAGAGAGAAGATACAAGGTAGCGTGGTAGCCC
ATCAACCACAAGATTATGCAACAATAGTGAGGGTGGTCGAGCTGATTGATCGTTGTTTGAAAGTTGCCCCTCTAGAATCTTCCTAA
Protein sequenceShow/hide protein sequence
MAIFHRNRLSPHELSRRLEEFVALKQGSRTIDEYETKFARLSQFAPAMVTTEADKVERFITGLREKIQGSVVAHQPQDYATIVRVVELIDRCLKVAPLESS