| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0039950.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 1.8e-56 | 46.4 | Show/hide |
Query: ISHLLFVDDILLFVQDDDEVLANCFKIIKAFKQASGLNINFRKSSISGVNVSEDRIACIASSWGCAPCQLPISYLGSPLGGNLAHTSFWSSVVEKIQRKL
++H+LF DDIL+FV+D D+ ++N I+ F+ ASGLNIN KS+I +NV DR IA SWG + LP SYLG PLGG + ++FW +V++KIQ+KL
Subjt: ISHLLFVDDILLFVQDDDEVLANCFKIIKAFKQASGLNINFRKSSISGVNVSEDRIACIASSWGCAPCQLPISYLGSPLGGNLAHTSFWSSVVEKIQRKL
Query: ENWHFSYISKGGRLTLIQATLSNIPLYMLSVFKAPQSICNHVDKVIRGFLWNGSSSDQNLPFLGLDVVAAPKVSEGLGFFKTRISNQVLQIKWIWRFYQE
NW +S +SKGGR+TLI +TL ++P+Y +SVFK P+ I ++ R FLWNG+S+ N+ + + + +PK GLG +N L KW+W+F E
Subjt: ENWHFSYISKGGRLTLIQATLSNIPLYMLSVFKAPQSICNHVDKVIRGFLWNGSSSDQNLPFLGLDVVAAPKVSEGLGFFKTRISNQVLQIKWIWRFYQE
Query: DQPLWKCLIVAKYKTSPMGALP
PLWK LI++KY MG+ P
Subjt: DQPLWKCLIVAKYKTSPMGALP
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| KAA0041397.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 4.1e-56 | 44.3 | Show/hide |
Query: QKGLIKGCSVCSTF-ISHLLFVDDILLFVQDDDEVLANCFKIIKAFKQASGLNINFRKSSISGVNVSEDRIACIASSWGCAPCQLPISYLGSPLGGNLAH
+KG I G + ++H+LF DDIL+FV+D ++ ++N I+ F+ ASGLNIN KS+I +NV DR I SWG + QLP +YLG PLGG +
Subjt: QKGLIKGCSVCSTF-ISHLLFVDDILLFVQDDDEVLANCFKIIKAFKQASGLNINFRKSSISGVNVSEDRIACIASSWGCAPCQLPISYLGSPLGGNLAH
Query: TSFWSSVVEKIQRKLENWHFSYISKGGRLTLIQATLSNIPLYMLSVFKAPQSICNHVDKVIRGFLWNGSSSDQNLPFLGLDVVAAPKVSEGLGFFKTRIS
++FW ++++KIQ+KL +W +S +SKGGR+TLI +TL ++P+Y LSVFK P+ I ++ R FLWNG+S+ N+ + + V +PK GLG +
Subjt: TSFWSSVVEKIQRKLENWHFSYISKGGRLTLIQATLSNIPLYMLSVFKAPQSICNHVDKVIRGFLWNGSSSDQNLPFLGLDVVAAPKVSEGLGFFKTRIS
Query: NQVLQIKWIWRFYQEDQPLWKCLIVAKYKTSPMGALP
N L KW+W+F E +PLWK LI++KY MG P
Subjt: NQVLQIKWIWRFYQEDQPLWKCLIVAKYKTSPMGALP
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| KAA0044556.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 9.0e-56 | 44.3 | Show/hide |
Query: QKGLIKGCSVCSTF-ISHLLFVDDILLFVQDDDEVLANCFKIIKAFKQASGLNINFRKSSISGVNVSEDRIACIASSWGCAPCQLPISYLGSPLGGNLAH
+KG I G + ++H+LF DDIL+FV+D ++ ++N I+ F+ ASGLNIN KS+I +NV DR I SWG + QLP +YLG PLGG +
Subjt: QKGLIKGCSVCSTF-ISHLLFVDDILLFVQDDDEVLANCFKIIKAFKQASGLNINFRKSSISGVNVSEDRIACIASSWGCAPCQLPISYLGSPLGGNLAH
Query: TSFWSSVVEKIQRKLENWHFSYISKGGRLTLIQATLSNIPLYMLSVFKAPQSICNHVDKVIRGFLWNGSSSDQNLPFLGLDVVAAPKVSEGLGFFKTRIS
++FW ++++KIQ+KL +W +S +SKGGR+TLI +TL ++P+Y LSVFK P+ I ++ R FLWNG+S+ N+ + + V +PK GLG +
Subjt: TSFWSSVVEKIQRKLENWHFSYISKGGRLTLIQATLSNIPLYMLSVFKAPQSICNHVDKVIRGFLWNGSSSDQNLPFLGLDVVAAPKVSEGLGFFKTRIS
Query: NQVLQIKWIWRFYQEDQPLWKCLIVAKYKTSPMGALP
N L KW+W+F E +PLWK LI++KY MG P
Subjt: NQVLQIKWIWRFYQEDQPLWKCLIVAKYKTSPMGALP
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| KAA0046762.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 1.0e-54 | 47.48 | Show/hide |
Query: EQKGLIKGCSVCSTF-ISHLLFVDDILLFVQDDDEVLANCFKIIKAFKQASGLNINFRKSSISGVNVSEDRIACIASSWGCAPCQLPISYLGSPLGGNLA
E G IKG S S ISH+LF DDILLF++D+D L N + F++ASGL IN KS++ +NVSE R AS WG + LP+SYLG PLGGN
Subjt: EQKGLIKGCSVCSTF-ISHLLFVDDILLFVQDDDEVLANCFKIIKAFKQASGLNINFRKSSISGVNVSEDRIACIASSWGCAPCQLPISYLGSPLGGNLA
Query: HTSFWSSVVEKIQRKLENWHFSYISKGGRLTLIQATLSNIPLYMLSVFKAPQSICNHVDKVIRGFLWNGSSSDQNLPFLGLDVVAAPKVSEGLGFFKTRI
FWS+V EKIQ+KL NW ++ ISKGGRLTLI++TLS++P Y LSVF+AP C +++K R FLW G++S + + V K GLG + +
Subjt: HTSFWSSVVEKIQRKLENWHFSYISKGGRLTLIQATLSNIPLYMLSVFKAPQSICNHVDKVIRGFLWNGSSSDQNLPFLGLDVVAAPKVSEGLGFFKTRI
Query: SNQVLQIKWIWRFYQEDQPLWKCLIVAKYKTSPMGALP
+N+ L KW+WR+ E + LW+ LI KYK G +P
Subjt: SNQVLQIKWIWRFYQEDQPLWKCLIVAKYKTSPMGALP
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| KAA0067274.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 2.9e-54 | 47.28 | Show/hide |
Query: EQKGLIKGCSV--CSTFISHLLFVDDILLFVQDDDEVLANCFKIIKAFKQASGLNINFRKSSISGVNVSEDRIACIASSWGCAPCQLPISYLGSPLGGNL
E KG IKG S C ISHLLF DD+L+FV+D+++ L N + F++ASGL N KS+IS +N+S DR IA +G LP++YLG PLGGN
Subjt: EQKGLIKGCSV--CSTFISHLLFVDDILLFVQDDDEVLANCFKIIKAFKQASGLNINFRKSSISGVNVSEDRIACIASSWGCAPCQLPISYLGSPLGGNL
Query: AHTSFWSSVVEKIQRKLENWHFSYISKGGRLTLIQATLSNIPLYMLSVFKAPQSICNHVDKVIRGFLWNGSSSDQNLPFLGLDVVAAPKVSEGLGFFKTR
SFW +E I +KL W +S ISKGGRLTL++A+LS++P Y LS FKAP S+ ++K R FLW GS QN + + +PK EGLG K +
Subjt: AHTSFWSSVVEKIQRKLENWHFSYISKGGRLTLIQATLSNIPLYMLSVFKAPQSICNHVDKVIRGFLWNGSSSDQNLPFLGLDVVAAPKVSEGLGFFKTR
Query: ISNQVLQIKWIWRFYQEDQPLWKCLIVAKYKTSPMGALP
+NQVL KW+WR++ E LWK I AKY + G +P
Subjt: ISNQVLQIKWIWRFYQEDQPLWKCLIVAKYKTSPMGALP
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T9I7 LINE-1 retrotransposable element ORF2 protein | 8.8e-57 | 46.4 | Show/hide |
Query: ISHLLFVDDILLFVQDDDEVLANCFKIIKAFKQASGLNINFRKSSISGVNVSEDRIACIASSWGCAPCQLPISYLGSPLGGNLAHTSFWSSVVEKIQRKL
++H+LF DDIL+FV+D D+ ++N I+ F+ ASGLNIN KS+I +NV DR IA SWG + LP SYLG PLGG + ++FW +V++KIQ+KL
Subjt: ISHLLFVDDILLFVQDDDEVLANCFKIIKAFKQASGLNINFRKSSISGVNVSEDRIACIASSWGCAPCQLPISYLGSPLGGNLAHTSFWSSVVEKIQRKL
Query: ENWHFSYISKGGRLTLIQATLSNIPLYMLSVFKAPQSICNHVDKVIRGFLWNGSSSDQNLPFLGLDVVAAPKVSEGLGFFKTRISNQVLQIKWIWRFYQE
NW +S +SKGGR+TLI +TL ++P+Y +SVFK P+ I ++ R FLWNG+S+ N+ + + + +PK GLG +N L KW+W+F E
Subjt: ENWHFSYISKGGRLTLIQATLSNIPLYMLSVFKAPQSICNHVDKVIRGFLWNGSSSDQNLPFLGLDVVAAPKVSEGLGFFKTRISNQVLQIKWIWRFYQE
Query: DQPLWKCLIVAKYKTSPMGALP
PLWK LI++KY MG+ P
Subjt: DQPLWKCLIVAKYKTSPMGALP
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| A0A5A7TIB8 LINE-1 retrotransposable element ORF2 protein | 2.0e-56 | 44.3 | Show/hide |
Query: QKGLIKGCSVCSTF-ISHLLFVDDILLFVQDDDEVLANCFKIIKAFKQASGLNINFRKSSISGVNVSEDRIACIASSWGCAPCQLPISYLGSPLGGNLAH
+KG I G + ++H+LF DDIL+FV+D ++ ++N I+ F+ ASGLNIN KS+I +NV DR I SWG + QLP +YLG PLGG +
Subjt: QKGLIKGCSVCSTF-ISHLLFVDDILLFVQDDDEVLANCFKIIKAFKQASGLNINFRKSSISGVNVSEDRIACIASSWGCAPCQLPISYLGSPLGGNLAH
Query: TSFWSSVVEKIQRKLENWHFSYISKGGRLTLIQATLSNIPLYMLSVFKAPQSICNHVDKVIRGFLWNGSSSDQNLPFLGLDVVAAPKVSEGLGFFKTRIS
++FW ++++KIQ+KL +W +S +SKGGR+TLI +TL ++P+Y LSVFK P+ I ++ R FLWNG+S+ N+ + + V +PK GLG +
Subjt: TSFWSSVVEKIQRKLENWHFSYISKGGRLTLIQATLSNIPLYMLSVFKAPQSICNHVDKVIRGFLWNGSSSDQNLPFLGLDVVAAPKVSEGLGFFKTRIS
Query: NQVLQIKWIWRFYQEDQPLWKCLIVAKYKTSPMGALP
N L KW+W+F E +PLWK LI++KY MG P
Subjt: NQVLQIKWIWRFYQEDQPLWKCLIVAKYKTSPMGALP
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| A0A5A7TR15 LINE-1 retrotransposable element ORF2 protein | 4.4e-56 | 44.3 | Show/hide |
Query: QKGLIKGCSVCSTF-ISHLLFVDDILLFVQDDDEVLANCFKIIKAFKQASGLNINFRKSSISGVNVSEDRIACIASSWGCAPCQLPISYLGSPLGGNLAH
+KG I G + ++H+LF DDIL+FV+D ++ ++N I+ F+ ASGLNIN KS+I +NV DR I SWG + QLP +YLG PLGG +
Subjt: QKGLIKGCSVCSTF-ISHLLFVDDILLFVQDDDEVLANCFKIIKAFKQASGLNINFRKSSISGVNVSEDRIACIASSWGCAPCQLPISYLGSPLGGNLAH
Query: TSFWSSVVEKIQRKLENWHFSYISKGGRLTLIQATLSNIPLYMLSVFKAPQSICNHVDKVIRGFLWNGSSSDQNLPFLGLDVVAAPKVSEGLGFFKTRIS
++FW ++++KIQ+KL +W +S +SKGGR+TLI +TL ++P+Y LSVFK P+ I ++ R FLWNG+S+ N+ + + V +PK GLG +
Subjt: TSFWSSVVEKIQRKLENWHFSYISKGGRLTLIQATLSNIPLYMLSVFKAPQSICNHVDKVIRGFLWNGSSSDQNLPFLGLDVVAAPKVSEGLGFFKTRIS
Query: NQVLQIKWIWRFYQEDQPLWKCLIVAKYKTSPMGALP
N L KW+W+F E +PLWK LI++KY MG P
Subjt: NQVLQIKWIWRFYQEDQPLWKCLIVAKYKTSPMGALP
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| A0A5A7TTK1 LINE-1 retrotransposable element ORF2 protein | 4.8e-55 | 47.48 | Show/hide |
Query: EQKGLIKGCSVCSTF-ISHLLFVDDILLFVQDDDEVLANCFKIIKAFKQASGLNINFRKSSISGVNVSEDRIACIASSWGCAPCQLPISYLGSPLGGNLA
E G IKG S S ISH+LF DDILLF++D+D L N + F++ASGL IN KS++ +NVSE R AS WG + LP+SYLG PLGGN
Subjt: EQKGLIKGCSVCSTF-ISHLLFVDDILLFVQDDDEVLANCFKIIKAFKQASGLNINFRKSSISGVNVSEDRIACIASSWGCAPCQLPISYLGSPLGGNLA
Query: HTSFWSSVVEKIQRKLENWHFSYISKGGRLTLIQATLSNIPLYMLSVFKAPQSICNHVDKVIRGFLWNGSSSDQNLPFLGLDVVAAPKVSEGLGFFKTRI
FWS+V EKIQ+KL NW ++ ISKGGRLTLI++TLS++P Y LSVF+AP C +++K R FLW G++S + + V K GLG + +
Subjt: HTSFWSSVVEKIQRKLENWHFSYISKGGRLTLIQATLSNIPLYMLSVFKAPQSICNHVDKVIRGFLWNGSSSDQNLPFLGLDVVAAPKVSEGLGFFKTRI
Query: SNQVLQIKWIWRFYQEDQPLWKCLIVAKYKTSPMGALP
+N+ L KW+WR+ E + LW+ LI KYK G +P
Subjt: SNQVLQIKWIWRFYQEDQPLWKCLIVAKYKTSPMGALP
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| A0A5A7VIU9 LINE-1 retrotransposable element ORF2 protein | 1.4e-54 | 47.28 | Show/hide |
Query: EQKGLIKGCSV--CSTFISHLLFVDDILLFVQDDDEVLANCFKIIKAFKQASGLNINFRKSSISGVNVSEDRIACIASSWGCAPCQLPISYLGSPLGGNL
E KG IKG S C ISHLLF DD+L+FV+D+++ L N + F++ASGL N KS+IS +N+S DR IA +G LP++YLG PLGGN
Subjt: EQKGLIKGCSV--CSTFISHLLFVDDILLFVQDDDEVLANCFKIIKAFKQASGLNINFRKSSISGVNVSEDRIACIASSWGCAPCQLPISYLGSPLGGNL
Query: AHTSFWSSVVEKIQRKLENWHFSYISKGGRLTLIQATLSNIPLYMLSVFKAPQSICNHVDKVIRGFLWNGSSSDQNLPFLGLDVVAAPKVSEGLGFFKTR
SFW +E I +KL W +S ISKGGRLTL++A+LS++P Y LS FKAP S+ ++K R FLW GS QN + + +PK EGLG K +
Subjt: AHTSFWSSVVEKIQRKLENWHFSYISKGGRLTLIQATLSNIPLYMLSVFKAPQSICNHVDKVIRGFLWNGSSSDQNLPFLGLDVVAAPKVSEGLGFFKTR
Query: ISNQVLQIKWIWRFYQEDQPLWKCLIVAKYKTSPMGALP
+NQVL KW+WR++ E LWK I AKY + G +P
Subjt: ISNQVLQIKWIWRFYQEDQPLWKCLIVAKYKTSPMGALP
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O00370 LINE-1 retrotransposable element ORF2 protein | 3.1e-06 | 20.25 | Show/hide |
Query: QKGLIKGCSVCSTFISHLLFVDDILLFVQDDDEVLANCFKIIKAFKQASGLNINFRKSSISGVNVSEDRIACIASSWGCAPCQLPISYLGSPLGGNL--A
Q+ IKG + + LF DD+++++++ N K+I F + SG IN +KS N + + I I YLG L ++
Subjt: QKGLIKGCSVCSTFISHLLFVDDILLFVQDDDEVLANCFKIIKAFKQASGLNINFRKSSISGVNVSEDRIACIASSWGCAPCQLPISYLGSPLGGNL--A
Query: HTSFWSSVVEKIQRKLENWHFSYISKGGRLTLIQATLSNIPLYMLSV--FKAPQSICNHVDKVIRGFLWNGSSSDQNLPFLGLDVVAAPKVSEGLGF--F
+ ++++I+ W S GR+ +++ + +Y + K P + ++K F+WN Q + +++ + G+ F
Subjt: HTSFWSSVVEKIQRKLENWHFSYISKGGRLTLIQATLSNIPLYMLSV--FKAPQSICNHVDKVIRGFLWNGSSSDQNLPFLGLDVVAAPKVSEGLGF--F
Query: KTRISNQVLQIKWIWRFYQEDQPLWKCLIVAKYKTSPMGALP
K V + W W + D W +T P +P
Subjt: KTRISNQVLQIKWIWRFYQEDQPLWKCLIVAKYKTSPMGALP
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| P08548 LINE-1 reverse transcriptase homolog | 4.7e-07 | 20.91 | Show/hide |
Query: VTEQKGLIKGCSVCSTFISHLLFVDDILLFVQDDDEVLANCFKIIKAFKQASGLNINFRKSSISGVNVSEDRIACIASSWGCAPCQLPISYLGSPLGGNL
+ E+K IKG + S I LF DD+++++++ + ++IK + SG IN KS + + S + YLG L ++
Subjt: VTEQKGLIKGCSVCSTFISHLLFVDDILLFVQDDDEVLANCFKIIKAFKQASGLNINFRKSSISGVNVSEDRIACIASSWGCAPCQLPISYLGSPLGGNL
Query: --AHTSFWSSVVEKIQRKLENWHFSYISKGGRLTLIQATLSNIPLYMLSV--FKAPQSICNHVDKVIRGFLWNGSSSDQNLPFLGLDVVAAPKVSEGLGF
+ + ++ ++I + W S GR+ +++ ++ +Y + KAP S ++K+I F+WN Q P + +++ + G+
Subjt: --AHTSFWSSVVEKIQRKLENWHFSYISKGGRLTLIQATLSNIPLYMLSV--FKAPQSICNHVDKVIRGFLWNGSSSDQNLPFLGLDVVAAPKVSEGLGF
Query: FKTRISNQVLQIKWIWRFYQ
R+ + + IK W +++
Subjt: FKTRISNQVLQIKWIWRFYQ
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| P0C2F6 Putative ribonuclease H protein At1g65750 | 5.6e-16 | 32 | Show/hide |
Query: WSSVVEKIQRKLENWHFSYISKGGRLTLIQATLSNIPLYMLSVFKAPQSICNHVDKVIRGFLWNGSSSDQNLPFLGLDVVAAPKVSEGLGFFKTRISNQV
+ ++E++ ++ W +S GRLTL +A LS++P++ +S PQSI N +D++ R FLW ++ + + V +PK GLG + N+
Subjt: WSSVVEKIQRKLENWHFSYISKGGRLTLIQATLSNIPLYMLSVFKAPQSICNHVDKVIRGFLWNGSSSDQNLPFLGLDVVAAPKVSEGLGFFKTRISNQV
Query: LQIKWIWRFYQEDQPLWKCLIVAKY
L K WR QE LW ++ KY
Subjt: LQIKWIWRFYQEDQPLWKCLIVAKY
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