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Lag0031896 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031896
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionC2H2-type domain-containing protein
Genome locationchr11:17943037..17943459
RNA-Seq ExpressionLag0031896
SyntenyLag0031896
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG4973988.1 hypothetical protein JHK87_030809 [Glycine soja]3.9e-0834.46Show/hide
Query:  SSKEESGRNRAGGRSFECSFCKKWLKSSQALGGHMNIHRKEKAKLVV----------ELKSAPTSSNKMAIG---------------IPWLPRGGSSTAT
        S  EE G +    RSFEC+FC++   ++QALGGHMNIHRK+KAKL            + KS    SNK                   +P      +S+ T
Subjt:  SSKEESGRNRAGGRSFECSFCKKWLKSSQALGGHMNIHRKEKAKLVV----------ELKSAPTSSNKMAIG---------------IPWLPRGGSSTAT

Query:  EEGHGHADQGNNINTTLTMDTPPFDLLSEAVSAQNTSSDIDLELRLGP
        ++      QG    TT             ++S Q++SS++DLELRLGP
Subjt:  EEGHGHADQGNNINTTLTMDTPPFDLLSEAVSAQNTSSDIDLELRLGP

XP_004145329.1 transcriptional regulator TAC1 [Cucumis sativus]7.0e-1035.03Show/hide
Query:  KEESGRNRAGGRSFECSFCKKWLKSSQALGGHMNIHRKEKAKL--VVELKSAPTSSNKMAIGIP-------WLPRGGSSTATEEGHGHA-----------
        +E+SG N++  RS+EC+FCK+   ++QALGGHMNIHRKEKAKL   +   S  +S NKM +  P        LP    S +T + HG +           
Subjt:  KEESGRNRAGGRSFECSFCKKWLKSSQALGGHMNIHRKEKAKL--VVELKSAPTSSNKMAIGIP-------WLPRGGSSTATEEGHGHA-----------

Query:  ----------------DQGNNINTTLTMDTPPFDLLSEAVSAQNTSSDIDLELRLGP
                        DQ   I   L +D      L       ++ S++DLELRLGP
Subjt:  ----------------DQGNNINTTLTMDTPPFDLLSEAVSAQNTSSDIDLELRLGP

XP_008457447.1 PREDICTED: transcriptional regulator TAC1-like [Cucumis melo]7.0e-1034.18Show/hide
Query:  KEESGRNRAGGRSFECSFCKKWLKSSQALGGHMNIHRKEKAKL--VVELKSAPTSSNKMAIGIPWL-------PRGGSSTATEEGHGHA-----------
        +E+SG N++  RS+EC+FCK+   ++QALGGHMNIHRKEKAKL   +   S  +S NKM +  P +       P    S +T E HG +           
Subjt:  KEESGRNRAGGRSFECSFCKKWLKSSQALGGHMNIHRKEKAKL--VVELKSAPTSSNKMAIGIPWL-------PRGGSSTATEEGHGHA-----------

Query:  -----------------DQGNNINTTLTMDTPPFDLLSEAVSAQNTSSDIDLELRLGP
                         DQ   I   L ++      L       ++ S++DLELRLGP
Subjt:  -----------------DQGNNINTTLTMDTPPFDLLSEAVSAQNTSSDIDLELRLGP

XP_038706446.1 zinc finger protein KNUCKLES-like [Tripterygium wilfordii]5.9e-0933.57Show/hide
Query:  DQVKVMSSKEESGRNRAGG--------RSFECSFCKKWLKSSQALGGHMNIHRKEKAKLVVELKSAPTSSNKMAIGIPWLPRGGSSTATEEGHGHADQGN
        DQ        E G    GG        RS+ECSFCK+   ++QALGGHMNIHRK++AK+      +        I  PW+  GG   AT++      Q  
Subjt:  DQVKVMSSKEESGRNRAGG--------RSFECSFCKKWLKSSQALGGHMNIHRKEKAKLVVELKSAPTSSNKMAIGIPWLPRGGSSTATEEGHGHADQGN

Query:  NINTTLTMDTPPF-----DLLSEAVSAQNTSSDIDLELRLGPN
        N+ + +               S+    +  SS++DLELRLGP+
Subjt:  NINTTLTMDTPPF-----DLLSEAVSAQNTSSDIDLELRLGPN

XP_038895788.1 transcriptional regulator TAC1-like [Benincasa hispida]1.3e-1135.67Show/hide
Query:  KEESGRNRAGGRSFECSFCKKWLKSSQALGGHMNIHRKEKAKL--VVELKSAPTSSNKMAIGIP-WLPRGGS-------STATEEGH-------------
        +E+SG N++  RS+EC+FCK+   ++QALGGHMNIHRKEKAKL   +   S  +SSNKM + IP  +PR          S +  EGH             
Subjt:  KEESGRNRAGGRSFECSFCKKWLKSSQALGGHMNIHRKEKAKL--VVELKSAPTSSNKMAIGIP-WLPRGGS-------STATEEGH-------------

Query:  -------------GHADQGNNINTTLTMDTPPFDLLSEAVSAQNTSSDIDLELRLGP
                      + DQ   I+  L ++      L  +    ++ S++DLELRLGP
Subjt:  -------------GHADQGNNINTTLTMDTPPFDLLSEAVSAQNTSSDIDLELRLGP

TrEMBL top hitse value%identityAlignment
A0A0A0LXG2 C2H2-type domain-containing protein3.4e-1035.03Show/hide
Query:  KEESGRNRAGGRSFECSFCKKWLKSSQALGGHMNIHRKEKAKL--VVELKSAPTSSNKMAIGIP-------WLPRGGSSTATEEGHGHA-----------
        +E+SG N++  RS+EC+FCK+   ++QALGGHMNIHRKEKAKL   +   S  +S NKM +  P        LP    S +T + HG +           
Subjt:  KEESGRNRAGGRSFECSFCKKWLKSSQALGGHMNIHRKEKAKL--VVELKSAPTSSNKMAIGIP-------WLPRGGSSTATEEGHGHA-----------

Query:  ----------------DQGNNINTTLTMDTPPFDLLSEAVSAQNTSSDIDLELRLGP
                        DQ   I   L +D      L       ++ S++DLELRLGP
Subjt:  ----------------DQGNNINTTLTMDTPPFDLLSEAVSAQNTSSDIDLELRLGP

A0A1S3C679 transcriptional regulator TAC1-like3.4e-1034.18Show/hide
Query:  KEESGRNRAGGRSFECSFCKKWLKSSQALGGHMNIHRKEKAKL--VVELKSAPTSSNKMAIGIPWL-------PRGGSSTATEEGHGHA-----------
        +E+SG N++  RS+EC+FCK+   ++QALGGHMNIHRKEKAKL   +   S  +S NKM +  P +       P    S +T E HG +           
Subjt:  KEESGRNRAGGRSFECSFCKKWLKSSQALGGHMNIHRKEKAKL--VVELKSAPTSSNKMAIGIPWL-------PRGGSSTATEEGHGHA-----------

Query:  -----------------DQGNNINTTLTMDTPPFDLLSEAVSAQNTSSDIDLELRLGP
                         DQ   I   L ++      L       ++ S++DLELRLGP
Subjt:  -----------------DQGNNINTTLTMDTPPFDLLSEAVSAQNTSSDIDLELRLGP

A0A445I1H5 Transcriptional regulator TAC11.9e-0834.46Show/hide
Query:  SSKEESGRNRAGGRSFECSFCKKWLKSSQALGGHMNIHRKEKAKLVV----------ELKSAPTSSNKMAIG---------------IPWLPRGGSSTAT
        S  EE G +    RSFEC+FC++   ++QALGGHMNIHRK+KAKL            + KS    SNK                   +P      +S+ T
Subjt:  SSKEESGRNRAGGRSFECSFCKKWLKSSQALGGHMNIHRKEKAKLVV----------ELKSAPTSSNKMAIG---------------IPWLPRGGSSTAT

Query:  EEGHGHADQGNNINTTLTMDTPPFDLLSEAVSAQNTSSDIDLELRLGP
        ++      QG    TT             ++S Q++SS++DLELRLGP
Subjt:  EEGHGHADQGNNINTTLTMDTPPFDLLSEAVSAQNTSSDIDLELRLGP

A0A5A7VKP9 Transcriptional regulator TAC1-like3.4e-1034.18Show/hide
Query:  KEESGRNRAGGRSFECSFCKKWLKSSQALGGHMNIHRKEKAKL--VVELKSAPTSSNKMAIGIPWL-------PRGGSSTATEEGHGHA-----------
        +E+SG N++  RS+EC+FCK+   ++QALGGHMNIHRKEKAKL   +   S  +S NKM +  P +       P    S +T E HG +           
Subjt:  KEESGRNRAGGRSFECSFCKKWLKSSQALGGHMNIHRKEKAKL--VVELKSAPTSSNKMAIGIPWL-------PRGGSSTATEEGHGHA-----------

Query:  -----------------DQGNNINTTLTMDTPPFDLLSEAVSAQNTSSDIDLELRLGP
                         DQ   I   L ++      L       ++ S++DLELRLGP
Subjt:  -----------------DQGNNINTTLTMDTPPFDLLSEAVSAQNTSSDIDLELRLGP

I1LJY1 C2H2-type domain-containing protein1.9e-0834.46Show/hide
Query:  SSKEESGRNRAGGRSFECSFCKKWLKSSQALGGHMNIHRKEKAKLVV----------ELKSAPTSSNKMAIG---------------IPWLPRGGSSTAT
        S  EE G +    RSFEC+FC++   ++QALGGHMNIHRK+KAKL            + KS    SNK                   +P      +S+ T
Subjt:  SSKEESGRNRAGGRSFECSFCKKWLKSSQALGGHMNIHRKEKAKLVV----------ELKSAPTSSNKMAIG---------------IPWLPRGGSSTAT

Query:  EEGHGHADQGNNINTTLTMDTPPFDLLSEAVSAQNTSSDIDLELRLGP
        ++      QG    TT             ++S Q++SS++DLELRLGP
Subjt:  EEGHGHADQGNNINTTLTMDTPPFDLLSEAVSAQNTSSDIDLELRLGP

SwissProt top hitse value%identityAlignment
O80942 Zinc finger protein 104.9e-0662.5Show/hide
Query:  RSFECSFCKKWLKSSQALGGHMNIHRKEKAKL
        RS+ CSFC++  KS+QALGGHMN+HR+++A+L
Subjt:  RSFECSFCKKWLKSSQALGGHMNIHRKEKAKL

Q38895 Transcriptional regulator SUPERMAN3.4e-0754.55Show/hide
Query:  RSFECSFCKKWLKSSQALGGHMNIHRKEKAKLVVELKSAPTSSN
        RS+ CSFCK+  +S+QALGGHMN+HR+++A+L   L+ +P+SS+
Subjt:  RSFECSFCKKWLKSSQALGGHMNIHRKEKAKLVVELKSAPTSSN

Q9LHS9 Probable transcriptional regulator RABBIT EARS8.3e-0640.85Show/hide
Query:  FKDQVKVMSSKEESGRNRAGG-----RSFECSFCKKWLKSSQALGGHMNIHRKEKAKLVVELKSAPTSSNK
        F+++    S++E  G    GG     RS+ CSFC +  KS+QALGGHMN+HR+++A+L  +  S P+S+++
Subjt:  FKDQVKVMSSKEESGRNRAGG-----RSFECSFCKKWLKSSQALGGHMNIHRKEKAKLVVELKSAPTSSNK

Q9SLB8 Zinc finger protein 118.3e-0633.33Show/hide
Query:  RSFECSFCKKWLKSSQALGGHMNIHRKEKAKL--VVELKSAPTSSNKMAIGIPWLPRGGSSTATEEGHGHADQGNNINTTLTMDTPPFDLLSEAVS
        +++ CSFC++  +S+QALGGHMN+HR+++AKL  +      P     +A   P      SS++T   H      N  + T    +  FDLL    S
Subjt:  RSFECSFCKKWLKSSQALGGHMNIHRKEKAKL--VVELKSAPTSSNKMAIGIPWLPRGGSSTATEEGHGHADQGNNINTTLTMDTPPFDLLSEAVS

Q9SR34 Transcriptional regulator TAC15.4e-0562.5Show/hide
Query:  RSFECSFCKKWLKSSQALGGHMNIHRKEKAKL
        RS+ CSFC +   ++QALGGHMNIHR+++AKL
Subjt:  RSFECSFCKKWLKSSQALGGHMNIHRKEKAKL

Arabidopsis top hitse value%identityAlignment
AT2G37740.1 zinc-finger protein 103.5e-0762.5Show/hide
Query:  RSFECSFCKKWLKSSQALGGHMNIHRKEKAKL
        RS+ CSFC++  KS+QALGGHMN+HR+++A+L
Subjt:  RSFECSFCKKWLKSSQALGGHMNIHRKEKAKL

AT2G42410.1 zinc finger protein 115.9e-0733.33Show/hide
Query:  RSFECSFCKKWLKSSQALGGHMNIHRKEKAKL--VVELKSAPTSSNKMAIGIPWLPRGGSSTATEEGHGHADQGNNINTTLTMDTPPFDLLSEAVS
        +++ CSFC++  +S+QALGGHMN+HR+++AKL  +      P     +A   P      SS++T   H      N  + T    +  FDLL    S
Subjt:  RSFECSFCKKWLKSSQALGGHMNIHRKEKAKL--VVELKSAPTSSNKMAIGIPWLPRGGSSTATEEGHGHADQGNNINTTLTMDTPPFDLLSEAVS

AT3G23130.1 C2H2 and C2HC zinc fingers superfamily protein2.4e-0854.55Show/hide
Query:  RSFECSFCKKWLKSSQALGGHMNIHRKEKAKLVVELKSAPTSSN
        RS+ CSFCK+  +S+QALGGHMN+HR+++A+L   L+ +P+SS+
Subjt:  RSFECSFCKKWLKSSQALGGHMNIHRKEKAKLVVELKSAPTSSN

AT3G53820.1 C2H2 and C2HC zinc fingers superfamily protein2.7e-0734.13Show/hide
Query:  RSFECSFCKKWLKSSQALGGHMNIHRKEKAKL-VVELKS-------APTSSNKMAIGIPWLP---------RGGSSTATEEGHGHADQGNNINTTLTMDT
        R + C FC++   ++QALGGHMNIHRK++AKL    LK          TS N+    +  LP         R G    +E+G G  ++ N          
Subjt:  RSFECSFCKKWLKSSQALGGHMNIHRKEKAKL-VVELKS-------APTSSNKMAIGIPWLP---------RGGSSTATEEGHGHADQGNNINTTLTMDT

Query:  PPFDLLSEAVSAQNTSSDIDLELRLG
            +L +A+S   ++  IDLELRLG
Subjt:  PPFDLLSEAVSAQNTSSDIDLELRLG

AT5G01860.1 C2H2 and C2HC zinc fingers superfamily protein2.0e-0734.38Show/hide
Query:  EESGRNRAGGRSFECSFCKKWLKSSQALGGHMNIHRKEKAKLVVELKSAPTSSNKMAIGIPWLPRGGSSTATEEGHGHADQGNNINTTLTMDTPPF
        E S RN A  R F C+FCKK   +SQALGGH N H++E++ L    K    +  +++I   + P G S +++   +   D G   N  +   T P+
Subjt:  EESGRNRAGGRSFECSFCKKWLKSSQALGGHMNIHRKEKAKLVVELKSAPTSSNKMAIGIPWLPRGGSSTATEEGHGHADQGNNINTTLTMDTPPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAAGGTGCAGGTTGTGAGATTCAAAGATCAAGTGAAAGTGATGAGCTCAAAAGAAGAGAGTGGTAGGAATCGAGCAGGTGGTAGGTCTTTTGAGTGCAGTTTTTG
CAAGAAGTGGTTAAAAAGTTCACAAGCTTTAGGAGGCCACATGAACATACATAGAAAAGAGAAGGCCAAGCTGGTTGTAGAATTGAAATCGGCGCCAACGTCGTCAAACA
AAATGGCTATAGGCATTCCATGGTTGCCGCGAGGGGGCTCGTCTACGGCTACAGAAGAAGGCCATGGCCATGCCGATCAGGGCAACAACATAAATACCACTTTGACAATG
GACACTCCTCCGTTTGATCTCTTGTCGGAGGCTGTGTCCGCCCAAAACACTTCTTCTGACATTGATCTCGAGCTTAGGTTGGGACCTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACAAGGTGCAGGTTGTGAGATTCAAAGATCAAGTGAAAGTGATGAGCTCAAAAGAAGAGAGTGGTAGGAATCGAGCAGGTGGTAGGTCTTTTGAGTGCAGTTTTTG
CAAGAAGTGGTTAAAAAGTTCACAAGCTTTAGGAGGCCACATGAACATACATAGAAAAGAGAAGGCCAAGCTGGTTGTAGAATTGAAATCGGCGCCAACGTCGTCAAACA
AAATGGCTATAGGCATTCCATGGTTGCCGCGAGGGGGCTCGTCTACGGCTACAGAAGAAGGCCATGGCCATGCCGATCAGGGCAACAACATAAATACCACTTTGACAATG
GACACTCCTCCGTTTGATCTCTTGTCGGAGGCTGTGTCCGCCCAAAACACTTCTTCTGACATTGATCTCGAGCTTAGGTTGGGACCTAATTAA
Protein sequenceShow/hide protein sequence
MNKVQVVRFKDQVKVMSSKEESGRNRAGGRSFECSFCKKWLKSSQALGGHMNIHRKEKAKLVVELKSAPTSSNKMAIGIPWLPRGGSSTATEEGHGHADQGNNINTTLTM
DTPPFDLLSEAVSAQNTSSDIDLELRLGPN