; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0031911 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031911
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr11:18471514..18472329
RNA-Seq ExpressionLag0031911
SyntenyLag0031911
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7586300.1 Reverse transcriptase zinc-binding domain [Arabidopsis thaliana x Arabidopsis arenosa]1.7e-1528.22Show/hide
Query:  VIWAIWQMRNQMKNLNSRLDPPQIV----ADIISLIDKVHQQETYQTNLSETHLSHGLWKPPDSMQWKMNVDVAWFDSLNVGGVDWIIHNSNGSLIGAGG
        ++W IW+ RN       R DP ++V    A++   +D V +Q+        T  + G+W PP     K NVD  +  + ++    WI+HNS G     G 
Subjt:  VIWAIWQMRNQMKNLNSRLDPPQIV----ADIISLIDKVHQQETYQTNLSETHLSHGLWKPPDSMQWKMNVDVAWFDSLNVGGVDWIIHNSNGSLIGAGG

Query:  KKISRRMDIRLLESLAILEGMRQIYSKRRTHPELFTREVVIESNAEEIVKLINGDSEDISDISGLIDEIRELAMKISIVKIAFSPRSSNFLAHSLARVVA
         ++ +       E+ A+L  ++Q+++          + V+ ES+ E +VK++N D  DIS I  +  +I+  + K   V   F+PR +N +AH LA+  +
Subjt:  KKISRRMDIRLLESLAILEGMRQIYSKRRTHPELFTREVVIESNAEEIVKLINGDSEDISDISGLIDEIRELAMKISIVKIAFSPRSSNFLAHSLARVVA

Query:  KN
         N
Subjt:  KN

XP_021808158.1 uncharacterized protein LOC110751913 [Prunus avium]1.3e-1529.5Show/hide
Query:  IWAIWQMRNQMKNLNSRLDPPQIVADIISLIDK---VHQQETYQTNLSETHLSHGLWKPPDSMQWKMNVDVAWFDSLNVGGVDWIIHNSNGSLIGAGGKK
        +W IW+ RN     +++ DP +    +++ + +     Q+   Q + + +      W  P     K+N DVAWF  L  GGV W+I +S+G L+ AGG+ 
Subjt:  IWAIWQMRNQMKNLNSRLDPPQIVADIISLIDK---VHQQETYQTNLSETHLSHGLWKPPDSMQWKMNVDVAWFDSLNVGGVDWIIHNSNGSLIGAGGKK

Query:  ISRRMDIRLLESLAILEGMRQIYSKRRTHPELFTREVVIESNAEEIVKLINGDSEDISDISGLIDEIRELAMKISIVKIAFSPRSSNFLAHSLARVVAKN
          R     L+E LAI   +      + TH       V++ES+ +  + ++NG +   SD+ G++ +I++L    S V   F+P+S N +AH++A  V+K+
Subjt:  ISRRMDIRLLESLAILEGMRQIYSKRRTHPELFTREVVIESNAEEIVKLINGDSEDISDISGLIDEIRELAMKISIVKIAFSPRSSNFLAHSLARVVAKN

XP_022143535.1 uncharacterized protein LOC111013412 [Momordica charantia]2.3e-1730.52Show/hide
Query:  KASVVIWAIWQMRNQ--MKNLNSRLDPPQIVAD--IISLIDKVHQQETYQTNLSETHLSHGL-------WKPPDSMQWKMNVDVAWFDSLNVGGVDWIIH
        ++ ++ W IW+MRN+   K ++      Q+  D  II+   +    +   TN  + HL   +       WKPP S  WK+N + AW    N GG+ WI+ 
Subjt:  KASVVIWAIWQMRNQ--MKNLNSRLDPPQIVAD--IISLIDKVHQQETYQTNLSETHLSHGL-------WKPPDSMQWKMNVDVAWFDSLNVGGVDWIIH

Query:  NSNGSLIGAGGKKISRRMDIRLLESLAILEGMRQIYSKRRTHPELFTREVVIESNAEEIVKLINGDSEDISDISGLIDEIRELAMKISIVKIAFSPRSSN
        +  G +I A  + I    +I  LE +AI EG+R I   R+ H     R + +ES++ E + L++   +D ++I  L++EI ++   + IV +    R +N
Subjt:  NSNGSLIGAGGKKISRRMDIRLLESLAILEGMRQIYSKRRTHPELFTREVVIESNAEEIVKLINGDSEDISDISGLIDEIRELAMKISIVKIAFSPRSSN

Query:  FLAHSLARVVAKN
         +AH LAR   +N
Subjt:  FLAHSLARVVAKN

XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]9.7e-1629.17Show/hide
Query:  WAIWQMRNQMKNLNSRLDPPQIVADIISLI-DKVHQQETYQTNLSETHLSHGLWKPPDSMQWKMNVDVAWFDSLNVGGVDWIIHNSNGSLIGAGGKKISR
        W IW  RN +           ++  +   + +  +Q ET  + L +T  +   W+PP    W +N D +W DS + GG+ WII + +G ++ AG + +  
Subjt:  WAIWQMRNQMKNLNSRLDPPQIVADIISLI-DKVHQQETYQTNLSETHLSHGLWKPPDSMQWKMNVDVAWFDSLNVGGVDWIIHNSNGSLIGAGGKKISR

Query:  RMDIRLLESLAILEGMRQIYSKRRTHPELFTREVVIESNAEEIVKLINGDSEDISDISGLIDEIRELAMKISIVKIAFSPRSSNFLAHSLAR
          +++LLE+ AILEG+R + +     P      + IE+++ E+  L+N   ED++    +++EI  L     I+  A   R +N  AHSLA+
Subjt:  RMDIRLLESLAILEGMRQIYSKRRTHPELFTREVVIESNAEEIVKLINGDSEDISDISGLIDEIRELAMKISIVKIAFSPRSSNFLAHSLAR

XP_022156777.1 uncharacterized protein LOC111023608 [Momordica charantia]2.7e-1830.84Show/hide
Query:  KASVVIWAIWQMRNQ--MKNLNSRLDPPQIVAD--IISLIDKVHQQETYQTNLSETHLSHGL-------WKPPDSMQWKMNVDVAWFDSLNVGGVDWIIH
        ++ ++ W IW+MRN+   K ++S     Q+V D  II+   +    +    N  + HL   +       WKPP S  WK+N D AW    N GG+ WI+ 
Subjt:  KASVVIWAIWQMRNQ--MKNLNSRLDPPQIVAD--IISLIDKVHQQETYQTNLSETHLSHGL-------WKPPDSMQWKMNVDVAWFDSLNVGGVDWIIH

Query:  NSNGSLIGAGGKKISRRMDIRLLESLAILEGMRQIYSKR-RTHPELFTREVVIESNAEEIVKLINGDSEDISDISGLIDEIRELAMKISIVKIAFSPRSS
        +  G +I A  + I    +I  LE +AI EG+R I  +  R   +   R + +ES++ E + L++   +D ++I  L++EI ++   + IV +    R +
Subjt:  NSNGSLIGAGGKKISRRMDIRLLESLAILEGMRQIYSKR-RTHPELFTREVVIESNAEEIVKLINGDSEDISDISGLIDEIRELAMKISIVKIAFSPRSS

Query:  NFLAHSLARVVAKN
        N +AH LAR   +N
Subjt:  NFLAHSLARVVAKN

TrEMBL top hitse value%identityAlignment
A0A6J1CP26 uncharacterized protein LOC1110134121.1e-1730.52Show/hide
Query:  KASVVIWAIWQMRNQ--MKNLNSRLDPPQIVAD--IISLIDKVHQQETYQTNLSETHLSHGL-------WKPPDSMQWKMNVDVAWFDSLNVGGVDWIIH
        ++ ++ W IW+MRN+   K ++      Q+  D  II+   +    +   TN  + HL   +       WKPP S  WK+N + AW    N GG+ WI+ 
Subjt:  KASVVIWAIWQMRNQ--MKNLNSRLDPPQIVAD--IISLIDKVHQQETYQTNLSETHLSHGL-------WKPPDSMQWKMNVDVAWFDSLNVGGVDWIIH

Query:  NSNGSLIGAGGKKISRRMDIRLLESLAILEGMRQIYSKRRTHPELFTREVVIESNAEEIVKLINGDSEDISDISGLIDEIRELAMKISIVKIAFSPRSSN
        +  G +I A  + I    +I  LE +AI EG+R I   R+ H     R + +ES++ E + L++   +D ++I  L++EI ++   + IV +    R +N
Subjt:  NSNGSLIGAGGKKISRRMDIRLLESLAILEGMRQIYSKRRTHPELFTREVVIESNAEEIVKLINGDSEDISDISGLIDEIRELAMKISIVKIAFSPRSSN

Query:  FLAHSLARVVAKN
         +AH LAR   +N
Subjt:  FLAHSLARVVAKN

A0A6J1DNV9 uncharacterized protein LOC1110224034.7e-1629.17Show/hide
Query:  WAIWQMRNQMKNLNSRLDPPQIVADIISLI-DKVHQQETYQTNLSETHLSHGLWKPPDSMQWKMNVDVAWFDSLNVGGVDWIIHNSNGSLIGAGGKKISR
        W IW  RN +           ++  +   + +  +Q ET  + L +T  +   W+PP    W +N D +W DS + GG+ WII + +G ++ AG + +  
Subjt:  WAIWQMRNQMKNLNSRLDPPQIVADIISLI-DKVHQQETYQTNLSETHLSHGLWKPPDSMQWKMNVDVAWFDSLNVGGVDWIIHNSNGSLIGAGGKKISR

Query:  RMDIRLLESLAILEGMRQIYSKRRTHPELFTREVVIESNAEEIVKLINGDSEDISDISGLIDEIRELAMKISIVKIAFSPRSSNFLAHSLAR
          +++LLE+ AILEG+R + +     P      + IE+++ E+  L+N   ED++    +++EI  L     I+  A   R +N  AHSLA+
Subjt:  RMDIRLLESLAILEGMRQIYSKRRTHPELFTREVVIESNAEEIVKLINGDSEDISDISGLIDEIRELAMKISIVKIAFSPRSSNFLAHSLAR

A0A6J1DSV1 uncharacterized protein LOC1110236081.3e-1830.84Show/hide
Query:  KASVVIWAIWQMRNQ--MKNLNSRLDPPQIVAD--IISLIDKVHQQETYQTNLSETHLSHGL-------WKPPDSMQWKMNVDVAWFDSLNVGGVDWIIH
        ++ ++ W IW+MRN+   K ++S     Q+V D  II+   +    +    N  + HL   +       WKPP S  WK+N D AW    N GG+ WI+ 
Subjt:  KASVVIWAIWQMRNQ--MKNLNSRLDPPQIVAD--IISLIDKVHQQETYQTNLSETHLSHGL-------WKPPDSMQWKMNVDVAWFDSLNVGGVDWIIH

Query:  NSNGSLIGAGGKKISRRMDIRLLESLAILEGMRQIYSKR-RTHPELFTREVVIESNAEEIVKLINGDSEDISDISGLIDEIRELAMKISIVKIAFSPRSS
        +  G +I A  + I    +I  LE +AI EG+R I  +  R   +   R + +ES++ E + L++   +D ++I  L++EI ++   + IV +    R +
Subjt:  NSNGSLIGAGGKKISRRMDIRLLESLAILEGMRQIYSKR-RTHPELFTREVVIESNAEEIVKLINGDSEDISDISGLIDEIRELAMKISIVKIAFSPRSS

Query:  NFLAHSLARVVAKN
        N +AH LAR   +N
Subjt:  NFLAHSLARVVAKN

A0A6J5WPU6 Reverse transcriptase domain-containing protein1.3e-1329.21Show/hide
Query:  IWAIWQMRNQMKNLNSRLDPPQIVADIISLIDKVH------QQETYQTNLSETHLSHGLWKPPDSMQWKMNVDVAWFDSLNVGGVDWIIHNSNGSLIGAG
        +W IW+ RN       + DP + V  ++  + +        Q +  Q   S   LS   W  P     K+N D AW      GGV W+I +S G L+ AG
Subjt:  IWAIWQMRNQMKNLNSRLDPPQIVADIISLIDKVH------QQETYQTNLSETHLSHGLWKPPDSMQWKMNVDVAWFDSLNVGGVDWIIHNSNGSLIGAG

Query:  GKKISRRMDIRLLESLAILEGMRQIYSKRRTHPELFTREVVIESNAEEIVKLINGDSEDISDISGLIDEIRELAMKISIVKIAFSPRSSNFLAHSLARVV
        G+         ++E LAI   + +  +   T       ++++ES++++ + ++NG +   SD+ G++ +IR+L   +S V   F+PRS N  AHS+A  V
Subjt:  GKKISRRMDIRLLESLAILEGMRQIYSKRRTHPELFTREVVIESNAEEIVKLINGDSEDISDISGLIDEIRELAMKISIVKIAFSPRSSNFLAHSLARVV

Query:  AK
        +K
Subjt:  AK

A0A6P5S2T0 uncharacterized protein LOC1107519136.1e-1629.5Show/hide
Query:  IWAIWQMRNQMKNLNSRLDPPQIVADIISLIDK---VHQQETYQTNLSETHLSHGLWKPPDSMQWKMNVDVAWFDSLNVGGVDWIIHNSNGSLIGAGGKK
        +W IW+ RN     +++ DP +    +++ + +     Q+   Q + + +      W  P     K+N DVAWF  L  GGV W+I +S+G L+ AGG+ 
Subjt:  IWAIWQMRNQMKNLNSRLDPPQIVADIISLIDK---VHQQETYQTNLSETHLSHGLWKPPDSMQWKMNVDVAWFDSLNVGGVDWIIHNSNGSLIGAGGKK

Query:  ISRRMDIRLLESLAILEGMRQIYSKRRTHPELFTREVVIESNAEEIVKLINGDSEDISDISGLIDEIRELAMKISIVKIAFSPRSSNFLAHSLARVVAKN
          R     L+E LAI   +      + TH       V++ES+ +  + ++NG +   SD+ G++ +I++L    S V   F+P+S N +AH++A  V+K+
Subjt:  ISRRMDIRLLESLAILEGMRQIYSKRRTHPELFTREVVIESNAEEIVKLINGDSEDISDISGLIDEIRELAMKISIVKIAFSPRSSNFLAHSLARVVAKN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52990.1 thioredoxin family protein9.1e-0425.71Show/hide
Query:  SMQWKMNVDVAWFDSLNVGGVDWIIHNSNGSLIGAGGKKISRRMDIRLLESLAILEGMRQIYSKRRTHPELFTREVVIESNAEEIVKLINGDSEDISDIS
        S + K N D +  +   V G+ W+I NS G+++  G  K   RM     E  A+      I++ + T    +T+ V+ E +   + +LIN  S D   + 
Subjt:  SMQWKMNVDVAWFDSLNVGGVDWIIHNSNGSLIGAGGKKISRRMDIRLLESLAILEGMRQIYSKRRTHPELFTREVVIESNAEEIVKLINGDSEDISDIS

Query:  GLIDEIRELAMKISIVKIAFSPRSSNFLAHSLARVVAKNS
          +D I+      +  +  F+ R  N  A +L +   K+S
Subjt:  GLIDEIRELAMKISIVKIAFSPRSSNFLAHSLARVVAKNS

AT2G13980.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein6.7e-0727.15Show/hide
Query:  WKPPDSMQWKMNVDVAWFDSLNVGGVD----WIIHNSNGSLIGAGGKKISRRMDIRLLESLAILEGMRQIYSKRRTHPELFTREVVIESNAEEIVKLING
        WK P     K N D  +    NV  +D    WII N +G     G  ++         E+ A+L  ++Q + +           V++E + E +  L++G
Subjt:  WKPPDSMQWKMNVDVAWFDSLNVGGVD----WIIHNSNGSLIGAGGKKISRRMDIRLLESLAILEGMRQIYSKRRTHPELFTREVVIESNAEEIVKLING

Query:  DSEDISDISGLIDEIRELAMKISIVKIAFSPRSSNFLAHSLARVVAKNSDF
         S   + ++ L+D+IR  A K S V+ +F  R  N +AH LA++   ++ F
Subjt:  DSEDISDISGLIDEIRELAMKISIVKIAFSPRSSNFLAHSLARVVAKNSDF

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.7e-0822.17Show/hide
Query:  VIWAIWQMRNQMKNLNSRLDPPQIVA----DIISLIDKVHQQETYQTNLSETHLSHGLWKPPDSMQWKMNVDVAWFDSLNVGGVDWIIHNSNGSLIGAGG
        ++W IW+  N +   ++R      V     D    +D     E    N +     +  W PP   + K N D +  +   V G+ WI+ NS G++I  G 
Subjt:  VIWAIWQMRNQMKNLNSRLDPPQIVA----DIISLIDKVHQQETYQTNLSETHLSHGLWKPPDSMQWKMNVDVAWFDSLNVGGVDWIIHNSNGSLIGAGG

Query:  KKISRRMDIRLLESLAILEGMRQIYSKRRTHPELFTREVVIESNAEEIVKLINGDSEDISDISGLIDEIRELAMKISIVKIAFSPRSSNFLAHSLARVVA
         K   RM     E   ++  ++  Y           ++V+ E + + I ++IN  S +   +   +D I+        ++ +F  R  N  A  LA+   
Subjt:  KKISRRMDIRLLESLAILEGMRQIYSKRRTHPELFTREVVIESNAEEIVKLINGDSEDISDISGLIDEIRELAMKISIVKIAFSPRSSNFLAHSLARVVA

Query:  KNS
        K +
Subjt:  KNS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCTTCCGCTGCGTGGGGACTTTTATTCCCTTCAATTTCAAGGATTACTGGGATTGCGTTATCGATGCGAGTAATTTGGGGAAAGCTAGTGTAGTTATTTGGGCTAT
TTGGCAAATGAGGAATCAGATGAAAAATCTCAATAGCAGACTAGACCCACCTCAAATTGTAGCAGATATCATTTCCCTCATTGACAAGGTTCATCAGCAAGAAACATACC
AGACCAATCTGTCGGAGACCCACTTGAGTCACGGGCTATGGAAGCCGCCGGATAGCATGCAGTGGAAGATGAACGTCGACGTTGCGTGGTTCGATAGCTTGAACGTCGGA
GGGGTGGACTGGATTATCCACAACTCAAATGGTTCTCTGATCGGAGCTGGAGGAAAAAAGATTTCCAGAAGAATGGATATCAGATTGCTAGAATCTTTAGCAATTTTAGA
GGGGATGCGTCAAATTTATTCGAAGAGGCGTACTCACCCGGAGCTTTTCACCCGCGAAGTGGTGATCGAGTCTAATGCTGAGGAGATTGTCAAGCTGATCAATGGCGATT
CTGAAGATATTTCGGATATTTCGGGATTAATCGATGAAATTAGGGAGTTGGCGATGAAGATCAGCATTGTGAAGATCGCCTTCAGCCCGAGATCGTCGAACTTTTTGGCG
CACTCTCTTGCGCGCGTTGTTGCTAAAAATAGTGATTTTGTTTTTTTCCCTTTTGATCCTTCTTTGTGCTTGAGAATGGATGAGTCGTTGGTGGAGGCTCGTGATAGCCC
CAATTGGTTTTTCCCTTTTTTGGGAGGTTTGTTTGGTTGTATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGCTTCCGCTGCGTGGGGACTTTTATTCCCTTCAATTTCAAGGATTACTGGGATTGCGTTATCGATGCGAGTAATTTGGGGAAAGCTAGTGTAGTTATTTGGGCTAT
TTGGCAAATGAGGAATCAGATGAAAAATCTCAATAGCAGACTAGACCCACCTCAAATTGTAGCAGATATCATTTCCCTCATTGACAAGGTTCATCAGCAAGAAACATACC
AGACCAATCTGTCGGAGACCCACTTGAGTCACGGGCTATGGAAGCCGCCGGATAGCATGCAGTGGAAGATGAACGTCGACGTTGCGTGGTTCGATAGCTTGAACGTCGGA
GGGGTGGACTGGATTATCCACAACTCAAATGGTTCTCTGATCGGAGCTGGAGGAAAAAAGATTTCCAGAAGAATGGATATCAGATTGCTAGAATCTTTAGCAATTTTAGA
GGGGATGCGTCAAATTTATTCGAAGAGGCGTACTCACCCGGAGCTTTTCACCCGCGAAGTGGTGATCGAGTCTAATGCTGAGGAGATTGTCAAGCTGATCAATGGCGATT
CTGAAGATATTTCGGATATTTCGGGATTAATCGATGAAATTAGGGAGTTGGCGATGAAGATCAGCATTGTGAAGATCGCCTTCAGCCCGAGATCGTCGAACTTTTTGGCG
CACTCTCTTGCGCGCGTTGTTGCTAAAAATAGTGATTTTGTTTTTTTCCCTTTTGATCCTTCTTTGTGCTTGAGAATGGATGAGTCGTTGGTGGAGGCTCGTGATAGCCC
CAATTGGTTTTTCCCTTTTTTGGGAGGTTTGTTTGGTTGTATCTGA
Protein sequenceShow/hide protein sequence
MRFRCVGTFIPFNFKDYWDCVIDASNLGKASVVIWAIWQMRNQMKNLNSRLDPPQIVADIISLIDKVHQQETYQTNLSETHLSHGLWKPPDSMQWKMNVDVAWFDSLNVG
GVDWIIHNSNGSLIGAGGKKISRRMDIRLLESLAILEGMRQIYSKRRTHPELFTREVVIESNAEEIVKLINGDSEDISDISGLIDEIRELAMKISIVKIAFSPRSSNFLA
HSLARVVAKNSDFVFFPFDPSLCLRMDESLVEARDSPNWFFPFLGGLFGCI