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Lag0031912 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031912
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr11:18556153..18556993
RNA-Seq ExpressionLag0031912
SyntenyLag0031912
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_035662800.1 zinc finger protein 77-like [Branchiostoma floridae]2.0e-0427.66Show/hide
Query:  WTTESTSPHPDLRLYEPGPTSLPHLIWLENFDI---MRAWTTESTSPHPDLRLCEPGPTSLPHLIWLENFHI-MRAWTTESTSPHPDLRLREPRPTSLPH
        WT+ +T+P P  +   P   S P   W+        ++ WTT +T+P PD +   P   S P   WL      ++ WT  +T+P PD +   P   S P 
Subjt:  WTTESTSPHPDLRLYEPGPTSLPHLIWLENFDI---MRAWTTESTSPHPDLRLCEPGPTSLPHLIWLENFHI-MRAWTTESTSPHPDLRLREPRPTSLPH

Query:  LIWLEHLHIG-RAWTTELRLREP-GPTSLPHLTWP---KHLHIGRA----WATESTSPHLDLRLHEPGPLSLPHLVRLTWLRQKPRPL
          WL       + WTT      P    ++P +  P   K + I  A    W T +T+P    +   P  +S P      WL   P P+
Subjt:  LIWLEHLHIG-RAWTTELRLREP-GPTSLPHLTWP---KHLHIGRA----WATESTSPHLDLRLHEPGPLSLPHLVRLTWLRQKPRPL

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCTTCCGCTGCGTGGGGACTTTTATTCCCTTCATAATTAATAGCCCTACAATTTCACCATTAAAGTTCAGTATTCAGGAGTGTGCACAAGGCAACCGACTCAAGCA
TCAAGACATGCGAGCCTGGACTACCGAGTCTACCTCGCCTCATCCAGACTTGAGATTATATGAGCCTGGACCAACGAGTCTACCTCACCTCATCTGGCTTGAGAATTTTG
ACATCATGCGAGCCTGGACTACCGAGTCTACCTCTCCTCATCCAGACTTGAGATTATGTGAGCCTGGACCAACGAGTCTACCTCACCTCATCTGGCTTGAGAATTTTCAC
ATCATGCGAGCCTGGACTACCGAGTCTACCTCGCCTCATCCAGACTTGAGATTACGTGAGCCTAGACCAACGAGTCTACCTCACCTCATCTGGCTTGAGCATCTCCACAT
CGGGCGAGCCTGGACTACCGAATTGAGATTACGTGAGCCTGGACCGACGAGTCTACCTCACCTCACCTGGCCTAAGCATCTTCACATCGGGCGAGCCTGGGCTACCGAGT
CCACCTCACCTCATCTAGACTTGAGATTGCATGAGCCTGGACCACTGAGTTTACCTCACCTCGTGCGGCTCACCTGGCTGAGGCAGAAACCGAGACCTCTTGCCAAAACC
GAGCACCCTTGCCAAGGCCGAGCACCTCTTGCCGAGGTTGAGCACAAATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGCTTCCGCTGCGTGGGGACTTTTATTCCCTTCATAATTAATAGCCCTACAATTTCACCATTAAAGTTCAGTATTCAGGAGTGTGCACAAGGCAACCGACTCAAGCA
TCAAGACATGCGAGCCTGGACTACCGAGTCTACCTCGCCTCATCCAGACTTGAGATTATATGAGCCTGGACCAACGAGTCTACCTCACCTCATCTGGCTTGAGAATTTTG
ACATCATGCGAGCCTGGACTACCGAGTCTACCTCTCCTCATCCAGACTTGAGATTATGTGAGCCTGGACCAACGAGTCTACCTCACCTCATCTGGCTTGAGAATTTTCAC
ATCATGCGAGCCTGGACTACCGAGTCTACCTCGCCTCATCCAGACTTGAGATTACGTGAGCCTAGACCAACGAGTCTACCTCACCTCATCTGGCTTGAGCATCTCCACAT
CGGGCGAGCCTGGACTACCGAATTGAGATTACGTGAGCCTGGACCGACGAGTCTACCTCACCTCACCTGGCCTAAGCATCTTCACATCGGGCGAGCCTGGGCTACCGAGT
CCACCTCACCTCATCTAGACTTGAGATTGCATGAGCCTGGACCACTGAGTTTACCTCACCTCGTGCGGCTCACCTGGCTGAGGCAGAAACCGAGACCTCTTGCCAAAACC
GAGCACCCTTGCCAAGGCCGAGCACCTCTTGCCGAGGTTGAGCACAAATTTTAA
Protein sequenceShow/hide protein sequence
MRFRCVGTFIPFIINSPTISPLKFSIQECAQGNRLKHQDMRAWTTESTSPHPDLRLYEPGPTSLPHLIWLENFDIMRAWTTESTSPHPDLRLCEPGPTSLPHLIWLENFH
IMRAWTTESTSPHPDLRLREPRPTSLPHLIWLEHLHIGRAWTTELRLREPGPTSLPHLTWPKHLHIGRAWATESTSPHLDLRLHEPGPLSLPHLVRLTWLRQKPRPLAKT
EHPCQGRAPLAEVEHKF