; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0031917 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031917
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag/pol protein
Genome locationchr11:18775126..18780920
RNA-Seq ExpressionLag0031917
SyntenyLag0031917
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADJ18449.1 gag/pol protein, partial [Bryonia dioica]2.6e-12254.72Show/hide
Query:  MSSSLVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVRETYEKWTRANNKARVYILASISDVLSKKHERMVTAREIMTSLQG
        M++S+VQLLAS+KLNGDNY  WKSNLNTILV++DLRFVLTEECP  P  + NR VRE Y++W +AN+KARVYILAS++DVL+KKH+ + TA+ IM SL+ 
Subjt:  MSSSLVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVRETYEKWTRANNKARVYILASISDVLSKKHERMVTAREIMTSLQG

Query:  MFGQPSSQIRHEALKNVYNSRMKEGASVREHVLNMMVQFNIAEVNGATIDEGSQ---------------------------------------------G
        MFGQPS  +RHEA+K++Y  RMKEG SVREHVL+MM+ FNIAEVNG  IDE +Q                                             G
Subjt:  MFGQPSSQIRHEALKNVYNSRMKEGASVREHVLNMMVQFNIAEVNGATIDEGSQ---------------------------------------------G

Query:  HEGEANVATTKR-FQKGSSSGTKSGPSTSKNKSIQMKKKKDKGKGKAPVGSKAKTKAADKGKCFHCNVDGHWKRNCPKYLAEKKAEKEKQGKYDLLVIET
         E EANVA TKR F +GSSS  K GPS +     QMKK   KGKGKAP  SK K K ADKGKCFHCN DGHWKRNCPKYLAEKKAEK  QGKYDLLV+ET
Subjt:  HEGEANVATTKR-FQKGSSSGTKSGPSTSKNKSIQMKKKKDKGKGKAPVGSKAKTKAADKGKCFHCNVDGHWKRNCPKYLAEKKAEKEKQGKYDLLVIET

Query:  CLVEQDSSAWILDSGATNHVCSSLQEISSWHMLEDGEVTLKVGTGEVVTARASGTLKLSFGDRFLLLENVL-----------------------------
        CLVE D+S WILDSGATNH+C S QE SSW  L++GE+TLKVGTGEVV+A A G L L F DR+L+L++VL                             
Subjt:  CLVEQDSSAWILDSGATNHVCSSLQEISSWHMLEDGEVTLKVGTGEVVTARASGTLKLSFGDRFLLLENVL-----------------------------

Query:  ----------------------PIQVKAIFNTEMFKVAETQNKRRKVSLNTYLWHLRLGHINRNRI
                              P +   + NTEMF+  ETQNK++KVS N YLWHLRLGHIN NRI
Subjt:  ----------------------PIQVKAIFNTEMFKVAETQNKRRKVSLNTYLWHLRLGHINRNRI

KAA0035879.1 gag/pol protein [Cucumis melo var. makuwa]1.3e-11351.71Show/hide
Query:  MSSSLVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVRETYEKWTRANNKARVYILASISDVLSKKHERMVTAREIMTSLQG
        M+S+ + +LA+DKLNG+NY +WK+ +NT+L+I+DLRFVL EECP  P ++  R VRE YE+W +AN KAR YILAS+S+VL+KKHE M+TAREIM SLQ 
Subjt:  MSSSLVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVRETYEKWTRANNKARVYILASISDVLSKKHERMVTAREIMTSLQG

Query:  MFGQPSSQIRHEALKNVYNSRMKEGASVREHVLNMMVQFNIAEVNGATIDEGSQ---------------------------------------------G
        MFGQ S QI+H+ALK +YN+RM EGASVREHVLNMMV FN+AE+NGA IDE SQ                                             G
Subjt:  MFGQPSSQIRHEALKNVYNSRMKEGASVREHVLNMMVQFNIAEVNGATIDEGSQ---------------------------------------------G

Query:  HEGEANVAT-TKRFQKGSSSGTKSGPSTSKNKSIQMKKKKDKGKGKAPVGSKAKTKAADKGKCFHCNVDGHWKRNCPKYLAEKKAEKEKQGKYDLLVIET
         +GEANVAT T++F +GS+SGTKS PS+S NK  + KK     K         K   A KG CFHCN +GHWKRNCPKYLAEKK  K KQGKYDLLV+ET
Subjt:  HEGEANVAT-TKRFQKGSSSGTKSGPSTSKNKSIQMKKKKDKGKGKAPVGSKAKTKAADKGKCFHCNVDGHWKRNCPKYLAEKKAEKEKQGKYDLLVIET

Query:  CLVEQDSSAWILDSGATNHVCSSLQEISSWHMLEDGEVTLKVGTGEVVTARASGTLKLSFGDRFLLLENVL-----------------------------
        CLVE D SAWI+DSGATNHVCSS Q ISSW  LE GE+T++VGTG VV+A A G L+L     FLLLENV                              
Subjt:  CLVEQDSSAWILDSGATNHVCSSLQEISSWHMLEDGEVTLKVGTGEVVTARASGTLKLSFGDRFLLLENVL-----------------------------

Query:  ----------------------PIQVKAIFNTEMFKVAETQNKRRKVS--LNTYLWHLRLGHINRNRI
                               +  KA+ NTEMFK A TQNKR K+S   N +LWHLRLGHIN NRI
Subjt:  ----------------------PIQVKAIFNTEMFKVAETQNKRRKVS--LNTYLWHLRLGHINRNRI

KAA0047792.1 gag/pol protein [Cucumis melo var. makuwa]1.3e-11351.71Show/hide
Query:  MSSSLVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVRETYEKWTRANNKARVYILASISDVLSKKHERMVTAREIMTSLQG
        M+S+ + +LA+DKLNG+NY +WK+ +NT+L+I+DLRFVL EECP  P ++  R VRE YE+W +AN KAR YILAS+S+VL+KKHE M+TAREIM SLQ 
Subjt:  MSSSLVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVRETYEKWTRANNKARVYILASISDVLSKKHERMVTAREIMTSLQG

Query:  MFGQPSSQIRHEALKNVYNSRMKEGASVREHVLNMMVQFNIAEVNGATIDEGSQ---------------------------------------------G
        MFGQ S QI+H+ALK +YN+RM EGASVREHVLNMMV FN+AE+NGA IDE SQ                                             G
Subjt:  MFGQPSSQIRHEALKNVYNSRMKEGASVREHVLNMMVQFNIAEVNGATIDEGSQ---------------------------------------------G

Query:  HEGEANVAT-TKRFQKGSSSGTKSGPSTSKNKSIQMKKKKDKGKGKAPVGSKAKTKAADKGKCFHCNVDGHWKRNCPKYLAEKKAEKEKQGKYDLLVIET
         +GEANVAT T++F +GS+SGTKS PS+S NK  + KK     K         K   A KG CFHCN +GHWKRNCPKYLAEKK  K KQGKYDLLV+ET
Subjt:  HEGEANVAT-TKRFQKGSSSGTKSGPSTSKNKSIQMKKKKDKGKGKAPVGSKAKTKAADKGKCFHCNVDGHWKRNCPKYLAEKKAEKEKQGKYDLLVIET

Query:  CLVEQDSSAWILDSGATNHVCSSLQEISSWHMLEDGEVTLKVGTGEVVTARASGTLKLSFGDRFLLLENVL-----------------------------
        CLVE D SAWI+DSGATNHVCSS Q ISSW  LE GE+T++VGTG VV+A A G L+L     FLLLENV                              
Subjt:  CLVEQDSSAWILDSGATNHVCSSLQEISSWHMLEDGEVTLKVGTGEVVTARASGTLKLSFGDRFLLLENVL-----------------------------

Query:  ----------------------PIQVKAIFNTEMFKVAETQNKRRKVS--LNTYLWHLRLGHINRNRI
                               +  KA+ NTEMFK A TQNKR K+S   N +LWHLRLGHIN NRI
Subjt:  ----------------------PIQVKAIFNTEMFKVAETQNKRRKVS--LNTYLWHLRLGHINRNRI

KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]1.3e-11351.71Show/hide
Query:  MSSSLVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVRETYEKWTRANNKARVYILASISDVLSKKHERMVTAREIMTSLQG
        M+S+ + +LA+DKLNG+NY +WK+ +NT+L+I+DLRFVL EECP  P ++  R VRE YE+W +AN KAR YILAS+S+VL+KKHE M+TAREIM SLQ 
Subjt:  MSSSLVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVRETYEKWTRANNKARVYILASISDVLSKKHERMVTAREIMTSLQG

Query:  MFGQPSSQIRHEALKNVYNSRMKEGASVREHVLNMMVQFNIAEVNGATIDEGSQ---------------------------------------------G
        MFGQ S QI+H+ALK +YN+RM EGASVREHVLNMMV FN+AE+NGA IDE SQ                                             G
Subjt:  MFGQPSSQIRHEALKNVYNSRMKEGASVREHVLNMMVQFNIAEVNGATIDEGSQ---------------------------------------------G

Query:  HEGEANVAT-TKRFQKGSSSGTKSGPSTSKNKSIQMKKKKDKGKGKAPVGSKAKTKAADKGKCFHCNVDGHWKRNCPKYLAEKKAEKEKQGKYDLLVIET
         +GEANVAT T++F +GS+SGTKS PS+S NK  + KK     K         K   A KG CFHCN +GHWKRNCPKYLAEKK  K KQGKYDLLV+ET
Subjt:  HEGEANVAT-TKRFQKGSSSGTKSGPSTSKNKSIQMKKKKDKGKGKAPVGSKAKTKAADKGKCFHCNVDGHWKRNCPKYLAEKKAEKEKQGKYDLLVIET

Query:  CLVEQDSSAWILDSGATNHVCSSLQEISSWHMLEDGEVTLKVGTGEVVTARASGTLKLSFGDRFLLLENVL-----------------------------
        CLVE D SAWI+DSGATNHVCSS Q ISSW  LE GE+T++VGTG VV+A A G L+L     FLLLENV                              
Subjt:  CLVEQDSSAWILDSGATNHVCSSLQEISSWHMLEDGEVTLKVGTGEVVTARASGTLKLSFGDRFLLLENVL-----------------------------

Query:  ----------------------PIQVKAIFNTEMFKVAETQNKRRKVS--LNTYLWHLRLGHINRNRI
                               +  KA+ NTEMFK A TQNKR K+S   N +LWHLRLGHIN NRI
Subjt:  ----------------------PIQVKAIFNTEMFKVAETQNKRRKVS--LNTYLWHLRLGHINRNRI

TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]1.3e-11351.71Show/hide
Query:  MSSSLVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVRETYEKWTRANNKARVYILASISDVLSKKHERMVTAREIMTSLQG
        M+S+ + +LA+DKLNG+NY +WK+ +NT+L+I+DLRFVL EECP  P ++  R VRE YE+W +AN KAR YILAS+S+VL+KKHE M+TAREIM SLQ 
Subjt:  MSSSLVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVRETYEKWTRANNKARVYILASISDVLSKKHERMVTAREIMTSLQG

Query:  MFGQPSSQIRHEALKNVYNSRMKEGASVREHVLNMMVQFNIAEVNGATIDEGSQ---------------------------------------------G
        MFGQ S QI+H+ALK +YN+RM EGASVREHVLNMMV FN+AE+NGA IDE SQ                                             G
Subjt:  MFGQPSSQIRHEALKNVYNSRMKEGASVREHVLNMMVQFNIAEVNGATIDEGSQ---------------------------------------------G

Query:  HEGEANVAT-TKRFQKGSSSGTKSGPSTSKNKSIQMKKKKDKGKGKAPVGSKAKTKAADKGKCFHCNVDGHWKRNCPKYLAEKKAEKEKQGKYDLLVIET
         +GEANVAT T++F +GS+SGTKS PS+S NK  + KK     K         K   A KG CFHCN +GHWKRNCPKYLAEKK  K KQGKYDLLV+ET
Subjt:  HEGEANVAT-TKRFQKGSSSGTKSGPSTSKNKSIQMKKKKDKGKGKAPVGSKAKTKAADKGKCFHCNVDGHWKRNCPKYLAEKKAEKEKQGKYDLLVIET

Query:  CLVEQDSSAWILDSGATNHVCSSLQEISSWHMLEDGEVTLKVGTGEVVTARASGTLKLSFGDRFLLLENVL-----------------------------
        CLVE D SAWI+DSGATNHVCSS Q ISSW  LE GE+T++VGTG VV+A A G L+L     FLLLENV                              
Subjt:  CLVEQDSSAWILDSGATNHVCSSLQEISSWHMLEDGEVTLKVGTGEVVTARASGTLKLSFGDRFLLLENVL-----------------------------

Query:  ----------------------PIQVKAIFNTEMFKVAETQNKRRKVS--LNTYLWHLRLGHINRNRI
                               +  KA+ NTEMFK A TQNKR K+S   N +LWHLRLGHIN NRI
Subjt:  ----------------------PIQVKAIFNTEMFKVAETQNKRRKVS--LNTYLWHLRLGHINRNRI

TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein6.3e-11451.71Show/hide
Query:  MSSSLVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVRETYEKWTRANNKARVYILASISDVLSKKHERMVTAREIMTSLQG
        M+S+ + +LA+DKLNG+NY +WK+ +NT+L+I+DLRFVL EECP  P ++  R VRE YE+W +AN KAR YILAS+S+VL+KKHE M+TAREIM SLQ 
Subjt:  MSSSLVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVRETYEKWTRANNKARVYILASISDVLSKKHERMVTAREIMTSLQG

Query:  MFGQPSSQIRHEALKNVYNSRMKEGASVREHVLNMMVQFNIAEVNGATIDEGSQ---------------------------------------------G
        MFGQ S QI+H+ALK +YN+RM EGASVREHVLNMMV FN+AE+NGA IDE SQ                                             G
Subjt:  MFGQPSSQIRHEALKNVYNSRMKEGASVREHVLNMMVQFNIAEVNGATIDEGSQ---------------------------------------------G

Query:  HEGEANVAT-TKRFQKGSSSGTKSGPSTSKNKSIQMKKKKDKGKGKAPVGSKAKTKAADKGKCFHCNVDGHWKRNCPKYLAEKKAEKEKQGKYDLLVIET
         +GEANVAT T++F +GS+SGTKS PS+S NK  + KK     K         K   A KG CFHCN +GHWKRNCPKYLAEKK  K KQGKYDLLV+ET
Subjt:  HEGEANVAT-TKRFQKGSSSGTKSGPSTSKNKSIQMKKKKDKGKGKAPVGSKAKTKAADKGKCFHCNVDGHWKRNCPKYLAEKKAEKEKQGKYDLLVIET

Query:  CLVEQDSSAWILDSGATNHVCSSLQEISSWHMLEDGEVTLKVGTGEVVTARASGTLKLSFGDRFLLLENVL-----------------------------
        CLVE D SAWI+DSGATNHVCSS Q ISSW  LE GE+T++VGTG VV+A A G L+L     FLLLENV                              
Subjt:  CLVEQDSSAWILDSGATNHVCSSLQEISSWHMLEDGEVTLKVGTGEVVTARASGTLKLSFGDRFLLLENVL-----------------------------

Query:  ----------------------PIQVKAIFNTEMFKVAETQNKRRKVS--LNTYLWHLRLGHINRNRI
                               +  KA+ NTEMFK A TQNKR K+S   N +LWHLRLGHIN NRI
Subjt:  ----------------------PIQVKAIFNTEMFKVAETQNKRRKVS--LNTYLWHLRLGHINRNRI

A0A5A7TWB9 Gag/pol protein6.3e-11451.71Show/hide
Query:  MSSSLVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVRETYEKWTRANNKARVYILASISDVLSKKHERMVTAREIMTSLQG
        M+S+ + +LA+DKLNG+NY +WK+ +NT+L+I+DLRFVL EECP  P ++  R VRE YE+W +AN KAR YILAS+S+VL+KKHE M+TAREIM SLQ 
Subjt:  MSSSLVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVRETYEKWTRANNKARVYILASISDVLSKKHERMVTAREIMTSLQG

Query:  MFGQPSSQIRHEALKNVYNSRMKEGASVREHVLNMMVQFNIAEVNGATIDEGSQ---------------------------------------------G
        MFGQ S QI+H+ALK +YN+RM EGASVREHVLNMMV FN+AE+NGA IDE SQ                                             G
Subjt:  MFGQPSSQIRHEALKNVYNSRMKEGASVREHVLNMMVQFNIAEVNGATIDEGSQ---------------------------------------------G

Query:  HEGEANVAT-TKRFQKGSSSGTKSGPSTSKNKSIQMKKKKDKGKGKAPVGSKAKTKAADKGKCFHCNVDGHWKRNCPKYLAEKKAEKEKQGKYDLLVIET
         +GEANVAT T++F +GS+SGTKS PS+S NK  + KK     K         K   A KG CFHCN +GHWKRNCPKYLAEKK  K KQGKYDLLV+ET
Subjt:  HEGEANVAT-TKRFQKGSSSGTKSGPSTSKNKSIQMKKKKDKGKGKAPVGSKAKTKAADKGKCFHCNVDGHWKRNCPKYLAEKKAEKEKQGKYDLLVIET

Query:  CLVEQDSSAWILDSGATNHVCSSLQEISSWHMLEDGEVTLKVGTGEVVTARASGTLKLSFGDRFLLLENVL-----------------------------
        CLVE D SAWI+DSGATNHVCSS Q ISSW  LE GE+T++VGTG VV+A A G L+L     FLLLENV                              
Subjt:  CLVEQDSSAWILDSGATNHVCSSLQEISSWHMLEDGEVTLKVGTGEVVTARASGTLKLSFGDRFLLLENVL-----------------------------

Query:  ----------------------PIQVKAIFNTEMFKVAETQNKRRKVS--LNTYLWHLRLGHINRNRI
                               +  KA+ NTEMFK A TQNKR K+S   N +LWHLRLGHIN NRI
Subjt:  ----------------------PIQVKAIFNTEMFKVAETQNKRRKVS--LNTYLWHLRLGHINRNRI

A0A5D3CPJ6 Gag/pol protein6.3e-11451.71Show/hide
Query:  MSSSLVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVRETYEKWTRANNKARVYILASISDVLSKKHERMVTAREIMTSLQG
        M+S+ + +LA+DKLNG+NY +WK+ +NT+L+I+DLRFVL EECP  P ++  R VRE YE+W +AN KAR YILAS+S+VL+KKHE M+TAREIM SLQ 
Subjt:  MSSSLVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVRETYEKWTRANNKARVYILASISDVLSKKHERMVTAREIMTSLQG

Query:  MFGQPSSQIRHEALKNVYNSRMKEGASVREHVLNMMVQFNIAEVNGATIDEGSQ---------------------------------------------G
        MFGQ S QI+H+ALK +YN+RM EGASVREHVLNMMV FN+AE+NGA IDE SQ                                             G
Subjt:  MFGQPSSQIRHEALKNVYNSRMKEGASVREHVLNMMVQFNIAEVNGATIDEGSQ---------------------------------------------G

Query:  HEGEANVAT-TKRFQKGSSSGTKSGPSTSKNKSIQMKKKKDKGKGKAPVGSKAKTKAADKGKCFHCNVDGHWKRNCPKYLAEKKAEKEKQGKYDLLVIET
         +GEANVAT T++F +GS+SGTKS PS+S NK  + KK     K         K   A KG CFHCN +GHWKRNCPKYLAEKK  K KQGKYDLLV+ET
Subjt:  HEGEANVAT-TKRFQKGSSSGTKSGPSTSKNKSIQMKKKKDKGKGKAPVGSKAKTKAADKGKCFHCNVDGHWKRNCPKYLAEKKAEKEKQGKYDLLVIET

Query:  CLVEQDSSAWILDSGATNHVCSSLQEISSWHMLEDGEVTLKVGTGEVVTARASGTLKLSFGDRFLLLENVL-----------------------------
        CLVE D SAWI+DSGATNHVCSS Q ISSW  LE GE+T++VGTG VV+A A G L+L     FLLLENV                              
Subjt:  CLVEQDSSAWILDSGATNHVCSSLQEISSWHMLEDGEVTLKVGTGEVVTARASGTLKLSFGDRFLLLENVL-----------------------------

Query:  ----------------------PIQVKAIFNTEMFKVAETQNKRRKVS--LNTYLWHLRLGHINRNRI
                               +  KA+ NTEMFK A TQNKR K+S   N +LWHLRLGHIN NRI
Subjt:  ----------------------PIQVKAIFNTEMFKVAETQNKRRKVS--LNTYLWHLRLGHINRNRI

A0A5D3CSZ6 Gag/pol protein6.3e-11451.71Show/hide
Query:  MSSSLVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVRETYEKWTRANNKARVYILASISDVLSKKHERMVTAREIMTSLQG
        M+S+ + +LA+DKLNG+NY +WK+ +NT+L+I+DLRFVL EECP  P ++  R VRE YE+W +AN KAR YILAS+S+VL+KKHE M+TAREIM SLQ 
Subjt:  MSSSLVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVRETYEKWTRANNKARVYILASISDVLSKKHERMVTAREIMTSLQG

Query:  MFGQPSSQIRHEALKNVYNSRMKEGASVREHVLNMMVQFNIAEVNGATIDEGSQ---------------------------------------------G
        MFGQ S QI+H+ALK +YN+RM EGASVREHVLNMMV FN+AE+NGA IDE SQ                                             G
Subjt:  MFGQPSSQIRHEALKNVYNSRMKEGASVREHVLNMMVQFNIAEVNGATIDEGSQ---------------------------------------------G

Query:  HEGEANVAT-TKRFQKGSSSGTKSGPSTSKNKSIQMKKKKDKGKGKAPVGSKAKTKAADKGKCFHCNVDGHWKRNCPKYLAEKKAEKEKQGKYDLLVIET
         +GEANVAT T++F +GS+SGTKS PS+S NK  + KK     K         K   A KG CFHCN +GHWKRNCPKYLAEKK  K KQGKYDLLV+ET
Subjt:  HEGEANVAT-TKRFQKGSSSGTKSGPSTSKNKSIQMKKKKDKGKGKAPVGSKAKTKAADKGKCFHCNVDGHWKRNCPKYLAEKKAEKEKQGKYDLLVIET

Query:  CLVEQDSSAWILDSGATNHVCSSLQEISSWHMLEDGEVTLKVGTGEVVTARASGTLKLSFGDRFLLLENVL-----------------------------
        CLVE D SAWI+DSGATNHVCSS Q ISSW  LE GE+T++VGTG VV+A A G L+L     FLLLENV                              
Subjt:  CLVEQDSSAWILDSGATNHVCSSLQEISSWHMLEDGEVTLKVGTGEVVTARASGTLKLSFGDRFLLLENVL-----------------------------

Query:  ----------------------PIQVKAIFNTEMFKVAETQNKRRKVS--LNTYLWHLRLGHINRNRI
                               +  KA+ NTEMFK A TQNKR K+S   N +LWHLRLGHIN NRI
Subjt:  ----------------------PIQVKAIFNTEMFKVAETQNKRRKVS--LNTYLWHLRLGHINRNRI

E2GK51 Gag/pol protein (Fragment)1.3e-12254.72Show/hide
Query:  MSSSLVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVRETYEKWTRANNKARVYILASISDVLSKKHERMVTAREIMTSLQG
        M++S+VQLLAS+KLNGDNY  WKSNLNTILV++DLRFVLTEECP  P  + NR VRE Y++W +AN+KARVYILAS++DVL+KKH+ + TA+ IM SL+ 
Subjt:  MSSSLVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVRETYEKWTRANNKARVYILASISDVLSKKHERMVTAREIMTSLQG

Query:  MFGQPSSQIRHEALKNVYNSRMKEGASVREHVLNMMVQFNIAEVNGATIDEGSQ---------------------------------------------G
        MFGQPS  +RHEA+K++Y  RMKEG SVREHVL+MM+ FNIAEVNG  IDE +Q                                             G
Subjt:  MFGQPSSQIRHEALKNVYNSRMKEGASVREHVLNMMVQFNIAEVNGATIDEGSQ---------------------------------------------G

Query:  HEGEANVATTKR-FQKGSSSGTKSGPSTSKNKSIQMKKKKDKGKGKAPVGSKAKTKAADKGKCFHCNVDGHWKRNCPKYLAEKKAEKEKQGKYDLLVIET
         E EANVA TKR F +GSSS  K GPS +     QMKK   KGKGKAP  SK K K ADKGKCFHCN DGHWKRNCPKYLAEKKAEK  QGKYDLLV+ET
Subjt:  HEGEANVATTKR-FQKGSSSGTKSGPSTSKNKSIQMKKKKDKGKGKAPVGSKAKTKAADKGKCFHCNVDGHWKRNCPKYLAEKKAEKEKQGKYDLLVIET

Query:  CLVEQDSSAWILDSGATNHVCSSLQEISSWHMLEDGEVTLKVGTGEVVTARASGTLKLSFGDRFLLLENVL-----------------------------
        CLVE D+S WILDSGATNH+C S QE SSW  L++GE+TLKVGTGEVV+A A G L L F DR+L+L++VL                             
Subjt:  CLVEQDSSAWILDSGATNHVCSSLQEISSWHMLEDGEVTLKVGTGEVVTARASGTLKLSFGDRFLLLENVL-----------------------------

Query:  ----------------------PIQVKAIFNTEMFKVAETQNKRRKVSLNTYLWHLRLGHINRNRI
                              P +   + NTEMF+  ETQNK++KVS N YLWHLRLGHIN NRI
Subjt:  ----------------------PIQVKAIFNTEMFKVAETQNKRRKVSLNTYLWHLRLGHINRNRI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTAGCTCACTAGTACAATTACTCGCTTCGGATAAGCTTAACGGGGATAACTATGGAACTTGGAAGTCTAATCTGAACACAATACTAGTAATCGAGGATCTTAGATT
TGTCCTTACCGAAGAGTGTCCACCTAACCCTGGCTCGTCAACAAACCGAATTGTTCGGGAAACATACGAGAAATGGACTCGAGCAAATAATAAAGCAAGAGTCTATATCT
TAGCAAGCATTTCGGATGTCTTGTCGAAAAAGCACGAGAGGATGGTCACCGCAAGGGAGATCATGACTTCGTTACAGGGTATGTTTGGACAACCGTCCTCACAAATCCGG
CACGAAGCTCTCAAGAATGTTTACAATTCCCGAATGAAGGAAGGTGCTTCTGTTAGGGAACATGTTTTGAACATGATGGTTCAGTTTAACATTGCTGAAGTAAACGGTGC
TACAATTGACGAGGGTAGTCAAGGACATGAAGGGGAGGCAAATGTTGCTACAACCAAAAGGTTCCAAAAGGGATCATCCTCAGGAACCAAGTCTGGACCTTCCACTTCAA
AGAATAAGAGTATTCAAATGAAGAAAAAGAAGGATAAAGGGAAAGGAAAAGCTCCTGTGGGAAGCAAGGCAAAAACTAAAGCTGCAGATAAAGGAAAATGTTTCCATTGT
AATGTAGACGGACATTGGAAACGCAATTGTCCCAAGTACCTCGCGGAAAAGAAGGCTGAAAAAGAAAAACAAGGTAAATATGATTTGCTCGTTATCGAAACATGTTTAGT
TGAGCAAGATAGCTCTGCCTGGATATTAGATTCAGGAGCGACTAACCATGTATGCTCTTCTTTACAGGAAATTAGTTCCTGGCATATGCTGGAAGACGGCGAAGTAACTC
TCAAAGTTGGAACTGGAGAGGTCGTCACAGCCAGAGCTTCAGGAACTCTCAAGTTGTCTTTTGGAGATAGATTTTTGTTACTAGAAAATGTCTTGCCAATTCAAGTTAAA
GCTATTTTTAATACAGAAATGTTTAAAGTAGCGGAAACTCAAAACAAAAGGCGAAAAGTTTCTCTGAATACCTATCTTTGGCACTTGAGATTAGGCCACATAAATCGCAA
TAGGATATGTGCTGACTATTCCTACCGCATAGCATATGTCGGAGCTCCGGATCTTTTGGGATATGTTTCAAACCCAATGAAGACCGACCGATCAAGCACTAGGCAACTGG
CTATCCCTAGCTCAGTCACTGGAGTTCACCAATACACAATGATCGTAGTTTCTGTTCCCAGTTTTGTTGCAGCACAGAATTTGCTCCCTCCAGTCGCCCAGCAGTATAAT
CTACACAAAATAATTTCCAATGCTTCCATTCTTCCAAATGGGTTAAAACATTTATCAGTCGTATCACATAGTGTCACCAGGACAAGCCATCGACAACCACGCTGGTTTCT
GTTCTCCAGCAAGCTCTCACTCTCTTCATCTCTTTCGACCAGCATCCCTCCCCTCTGTGTTCTTCGTCCGACCGCCCTCCCCTACGTTCCTCTCTCTCCGTCGCGCATCT
CCTCCTATAAGACCCACGACAAGGATCGCGTGCAATCCATCCACTCACCTTCTTCGTTACCCCGCAATCAGCCTTTCACGTTCGCCAGTAACTCCCGCGCGTCGTCTTCA
CCTCGCGCTGTTGTACTTCTCATCTCTCCCTCTATTCACGATCTAGTTGCACGTTCAACATCCATCCTCACGTTGATTTTCTTCAGCTCGAGCGATGTCGTTGGCATCGT
CGTCCTCGAACCAATCTCCTCCTCTCTCGCGAGTTTTCTTCCTCTCCAACGCACTCTCCAACTCTGTCTTCGACGACCAAGTCTAGCAGCCGCAGATCGAACCCCCACAC
ATGCCTTCTGTGCTCCTTTGGAGCCGCTCTCAAGGCTTTCTAGCCTTTTTGAGAGATTTCTTTGGCGGGAAATATTTTGGGGAATTTTGGGGAACATCCTAGGAGGCTCA
AGGAGAGTTCGGCAAGACTCCGAGCGTCAGCGAAGGGGTTTTTCGAAGCTCCAAAATGCTCTGTTCTGGTCTGTTTACGGCTCCAAAACGTCTCAAAAGCCAATCCCCCA
AAAACCTAGCCGCAATTTACTTTATATTCTGTTTTTTTTCGTCATAGCGTCGAGACGCTGTCAAGACAGCGTCTCGACGTTGCCTTCAAAACACGCGTTCTGGAAAAGGA
AGGCTAGCAGCGTCGAGACGCTAAGGTCGCAACGTCGAGACGCTGCGACATATGCGCGCCTAATCAAAAAAGGAATGCTAGCGTCGAGACGCTCAAGGGCTGGCGTCTCG
ACGCTAACCTGCGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTAGCTCACTAGTACAATTACTCGCTTCGGATAAGCTTAACGGGGATAACTATGGAACTTGGAAGTCTAATCTGAACACAATACTAGTAATCGAGGATCTTAGATT
TGTCCTTACCGAAGAGTGTCCACCTAACCCTGGCTCGTCAACAAACCGAATTGTTCGGGAAACATACGAGAAATGGACTCGAGCAAATAATAAAGCAAGAGTCTATATCT
TAGCAAGCATTTCGGATGTCTTGTCGAAAAAGCACGAGAGGATGGTCACCGCAAGGGAGATCATGACTTCGTTACAGGGTATGTTTGGACAACCGTCCTCACAAATCCGG
CACGAAGCTCTCAAGAATGTTTACAATTCCCGAATGAAGGAAGGTGCTTCTGTTAGGGAACATGTTTTGAACATGATGGTTCAGTTTAACATTGCTGAAGTAAACGGTGC
TACAATTGACGAGGGTAGTCAAGGACATGAAGGGGAGGCAAATGTTGCTACAACCAAAAGGTTCCAAAAGGGATCATCCTCAGGAACCAAGTCTGGACCTTCCACTTCAA
AGAATAAGAGTATTCAAATGAAGAAAAAGAAGGATAAAGGGAAAGGAAAAGCTCCTGTGGGAAGCAAGGCAAAAACTAAAGCTGCAGATAAAGGAAAATGTTTCCATTGT
AATGTAGACGGACATTGGAAACGCAATTGTCCCAAGTACCTCGCGGAAAAGAAGGCTGAAAAAGAAAAACAAGGTAAATATGATTTGCTCGTTATCGAAACATGTTTAGT
TGAGCAAGATAGCTCTGCCTGGATATTAGATTCAGGAGCGACTAACCATGTATGCTCTTCTTTACAGGAAATTAGTTCCTGGCATATGCTGGAAGACGGCGAAGTAACTC
TCAAAGTTGGAACTGGAGAGGTCGTCACAGCCAGAGCTTCAGGAACTCTCAAGTTGTCTTTTGGAGATAGATTTTTGTTACTAGAAAATGTCTTGCCAATTCAAGTTAAA
GCTATTTTTAATACAGAAATGTTTAAAGTAGCGGAAACTCAAAACAAAAGGCGAAAAGTTTCTCTGAATACCTATCTTTGGCACTTGAGATTAGGCCACATAAATCGCAA
TAGGATATGTGCTGACTATTCCTACCGCATAGCATATGTCGGAGCTCCGGATCTTTTGGGATATGTTTCAAACCCAATGAAGACCGACCGATCAAGCACTAGGCAACTGG
CTATCCCTAGCTCAGTCACTGGAGTTCACCAATACACAATGATCGTAGTTTCTGTTCCCAGTTTTGTTGCAGCACAGAATTTGCTCCCTCCAGTCGCCCAGCAGTATAAT
CTACACAAAATAATTTCCAATGCTTCCATTCTTCCAAATGGGTTAAAACATTTATCAGTCGTATCACATAGTGTCACCAGGACAAGCCATCGACAACCACGCTGGTTTCT
GTTCTCCAGCAAGCTCTCACTCTCTTCATCTCTTTCGACCAGCATCCCTCCCCTCTGTGTTCTTCGTCCGACCGCCCTCCCCTACGTTCCTCTCTCTCCGTCGCGCATCT
CCTCCTATAAGACCCACGACAAGGATCGCGTGCAATCCATCCACTCACCTTCTTCGTTACCCCGCAATCAGCCTTTCACGTTCGCCAGTAACTCCCGCGCGTCGTCTTCA
CCTCGCGCTGTTGTACTTCTCATCTCTCCCTCTATTCACGATCTAGTTGCACGTTCAACATCCATCCTCACGTTGATTTTCTTCAGCTCGAGCGATGTCGTTGGCATCGT
CGTCCTCGAACCAATCTCCTCCTCTCTCGCGAGTTTTCTTCCTCTCCAACGCACTCTCCAACTCTGTCTTCGACGACCAAGTCTAGCAGCCGCAGATCGAACCCCCACAC
ATGCCTTCTGTGCTCCTTTGGAGCCGCTCTCAAGGCTTTCTAGCCTTTTTGAGAGATTTCTTTGGCGGGAAATATTTTGGGGAATTTTGGGGAACATCCTAGGAGGCTCA
AGGAGAGTTCGGCAAGACTCCGAGCGTCAGCGAAGGGGTTTTTCGAAGCTCCAAAATGCTCTGTTCTGGTCTGTTTACGGCTCCAAAACGTCTCAAAAGCCAATCCCCCA
AAAACCTAGCCGCAATTTACTTTATATTCTGTTTTTTTTCGTCATAGCGTCGAGACGCTGTCAAGACAGCGTCTCGACGTTGCCTTCAAAACACGCGTTCTGGAAAAGGA
AGGCTAGCAGCGTCGAGACGCTAAGGTCGCAACGTCGAGACGCTGCGACATATGCGCGCCTAATCAAAAAAGGAATGCTAGCGTCGAGACGCTCAAGGGCTGGCGTCTCG
ACGCTAACCTGCGGTTGA
Protein sequenceShow/hide protein sequence
MSSSLVQLLASDKLNGDNYGTWKSNLNTILVIEDLRFVLTEECPPNPGSSTNRIVRETYEKWTRANNKARVYILASISDVLSKKHERMVTAREIMTSLQGMFGQPSSQIR
HEALKNVYNSRMKEGASVREHVLNMMVQFNIAEVNGATIDEGSQGHEGEANVATTKRFQKGSSSGTKSGPSTSKNKSIQMKKKKDKGKGKAPVGSKAKTKAADKGKCFHC
NVDGHWKRNCPKYLAEKKAEKEKQGKYDLLVIETCLVEQDSSAWILDSGATNHVCSSLQEISSWHMLEDGEVTLKVGTGEVVTARASGTLKLSFGDRFLLLENVLPIQVK
AIFNTEMFKVAETQNKRRKVSLNTYLWHLRLGHINRNRICADYSYRIAYVGAPDLLGYVSNPMKTDRSSTRQLAIPSSVTGVHQYTMIVVSVPSFVAAQNLLPPVAQQYN
LHKIISNASILPNGLKHLSVVSHSVTRTSHRQPRWFLFSSKLSLSSSLSTSIPPLCVLRPTALPYVPLSPSRISSYKTHDKDRVQSIHSPSSLPRNQPFTFASNSRASSS
PRAVVLLISPSIHDLVARSTSILTLIFFSSSDVVGIVVLEPISSSLASFLPLQRTLQLCLRRPSLAAADRTPTHAFCAPLEPLSRLSSLFERFLWREIFWGILGNILGGS
RRVRQDSERQRRGFSKLQNALFWSVYGSKTSQKPIPQKPSRNLLYILFFFVIASRRCQDSVSTLPSKHAFWKRKASSVETLRSQRRDAATYARLIKKGMLASRRSRAGVS
TLTCG