; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0031928 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031928
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationchr11:19337879..19338922
RNA-Seq ExpressionLag0031928
SyntenyLag0031928
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB53755.1 hypothetical protein L484_022412 [Morus notabilis]2.7e-0835.09Show/hide
Query:  FLRAGITQHGWELFCSKPKPVNSQVVRELYANIDKEEGFQVIVRGVAVDWSPTSINSLYNLQDFPHAGYNEMATVPSNEQLNAAIREVGIEGAQWRLSKT
        F+   I QHGW  FC  P      +VRE YAN+       V V+ V V ++  +INS++ L++     Y + A+  ++EQL   + EV IEGA W++S  
Subjt:  FLRAGITQHGWELFCSKPKPVNSQVVRELYANIDKEEGFQVIVRGVAVDWSPTSINSLYNLQDFPHAGYNEMATVPSNEQLNAAIREVGIEGAQWRLSKT

Query:  EKRTFQAVYLKKEA
           T     LK+ A
Subjt:  EKRTFQAVYLKKEA

KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]5.9e-0827.14Show/hide
Query:  FVNHFARVKYIGMLKRDFLFERGF------SGDLLHFLRAGITQHGWELFCSKPKPVNSQVVRELYANIDKEEGFQVIVRGVAVDWSPTSINSLYNLQDF
        FV+  A+  Y  +  R   FE GF      + +L   +   +T+H W+ F   P PVN+ +V+E Y+NI +     V+VRG+++ ++PT+IN  + LQ  
Subjt:  FVNHFARVKYIGMLKRDFLFERGF------SGDLLHFLRAGITQHGWELFCSKPKPVNSQVVRELYANIDKEEGFQVIVRGVAVDWSPTSINSLYNLQDF

Query:  PHAGYNEMATVPSNEQLNAAIREVGIEGAQWRLSKTEKRT
                A    +E     + ++ + G +W   + +++T
Subjt:  PHAGYNEMATVPSNEQLNAAIREVGIEGAQWRLSKTEKRT

PON42276.1 hypothetical protein PanWU01x14_283280 [Parasponia andersonii]9.2e-0936.36Show/hide
Query:  ERGFSGDLLH------FLRAGITQHGWELFCSKPKPVNSQVVRELYANIDKEEGFQVIVRGVAVDWSPTSINSLYNLQDFPHAGYNEMATVPSNEQLNAA
        E+GF GD         F+   ITQH W+LFC+ P+ + + +VRE YAN+   +   V VRGV V  S  +IN++Y L D P   ++E     +  +L   
Subjt:  ERGFSGDLLH------FLRAGITQHGWELFCSKPKPVNSQVVRELYANIDKEEGFQVIVRGVAVDWSPTSINSLYNLQDFPHAGYNEMATVPSNEQLNAA

Query:  IREVGIEGAQ
        +  V I GA+
Subjt:  IREVGIEGAQ

PON65868.1 hypothetical protein PanWU01x14_113570 [Parasponia andersonii]1.4e-0933.82Show/hide
Query:  RFVNHFARVKY-IGMLKRDFLFERGFSGDLLH------FLRAGITQHGWELFCSKPKPVNSQVVRELYANIDKEEGFQVIVRGVAVDWSPTSINSLYNLQ
        +F +  A  +Y   +  R    E+GF GD         F+   ITQH W+LFC+ P+     +VRE YAN+   +   V VRGV V  S  +IN++Y L 
Subjt:  RFVNHFARVKY-IGMLKRDFLFERGFSGDLLH------FLRAGITQHGWELFCSKPKPVNSQVVRELYANIDKEEGFQVIVRGVAVDWSPTSINSLYNLQ

Query:  DFPHAGYNEMATVPSNEQLNAAIREVGIEGAQWRLS
        D P   ++E     +  +L   +  V I GA+W +S
Subjt:  DFPHAGYNEMATVPSNEQLNAAIREVGIEGAQWRLS

XP_017248025.1 PREDICTED: uncharacterized protein LOC108219212 [Daucus carota subsp. sativus]5.0e-0729.63Show/hide
Query:  ERFVNHFARVKYIGMLKRDFLFERGF---SGDLLHFLRAGITQHGWELFCSKPKPVNSQVVRELYANIDKEEGFQVIVRGVAVDWSPTSINSLYNLQDFP
        ++F    A+ ++I ++ +    ERGF   SGD    L   I   GWE  C  P+ V   +VRE YAN   E+    IVRG+ VD++  +I  L  +Q+  
Subjt:  ERFVNHFARVKYIGMLKRDFLFERGF---SGDLLHFLRAGITQHGWELFCSKPKPVNSQVVRELYANIDKEEGFQVIVRGVAVDWSPTSINSLYNLQDFP

Query:  HAGYNEMATVPSNEQLNAAIREVGIEGAQWRLSKT
            + +     N  L+  + E+ + G  W+ + T
Subjt:  HAGYNEMATVPSNEQLNAAIREVGIEGAQWRLSKT

TrEMBL top hitse value%identityAlignment
A0A2P5B0K0 Uncharacterized protein4.4e-0936.36Show/hide
Query:  ERGFSGDLLH------FLRAGITQHGWELFCSKPKPVNSQVVRELYANIDKEEGFQVIVRGVAVDWSPTSINSLYNLQDFPHAGYNEMATVPSNEQLNAA
        E+GF GD         F+   ITQH W+LFC+ P+ + + +VRE YAN+   +   V VRGV V  S  +IN++Y L D P   ++E     +  +L   
Subjt:  ERGFSGDLLH------FLRAGITQHGWELFCSKPKPVNSQVVRELYANIDKEEGFQVIVRGVAVDWSPTSINSLYNLQDFPHAGYNEMATVPSNEQLNAA

Query:  IREVGIEGAQ
        +  V I GA+
Subjt:  IREVGIEGAQ

A0A2P5CXV1 Uncharacterized protein6.8e-1033.82Show/hide
Query:  RFVNHFARVKY-IGMLKRDFLFERGFSGDLLH------FLRAGITQHGWELFCSKPKPVNSQVVRELYANIDKEEGFQVIVRGVAVDWSPTSINSLYNLQ
        +F +  A  +Y   +  R    E+GF GD         F+   ITQH W+LFC+ P+     +VRE YAN+   +   V VRGV V  S  +IN++Y L 
Subjt:  RFVNHFARVKY-IGMLKRDFLFERGFSGDLLH------FLRAGITQHGWELFCSKPKPVNSQVVRELYANIDKEEGFQVIVRGVAVDWSPTSINSLYNLQ

Query:  DFPHAGYNEMATVPSNEQLNAAIREVGIEGAQWRLS
        D P   ++E     +  +L   +  V I GA+W +S
Subjt:  DFPHAGYNEMATVPSNEQLNAAIREVGIEGAQWRLS

A0A2P5CYU1 Uncharacterized protein (Fragment)7.1e-0737.63Show/hide
Query:  ITQHGWELFCSKPKPVNSQVVRELYANIDKEEGFQVIVRGVAVDWSPTSINSLYNLQDFPHAGYNEMATVPSNEQLNAAIREVGIEGAQWRLS
        I QH W+LFC+ PK     +VRE YAN+   E   V VRGV V  S  +IN+++ L D     Y+E        +L   ++ V I  A+W +S
Subjt:  ITQHGWELFCSKPKPVNSQVVRELYANIDKEEGFQVIVRGVAVDWSPTSINSLYNLQDFPHAGYNEMATVPSNEQLNAAIREVGIEGAQWRLS

A0A2P5DAQ2 Uncharacterized protein3.2e-0729.57Show/hide
Query:  LKRDFLFERGFSGDLLHFLRAGITQHGWELFCSKPKPVNSQVVRELYANIDKEEGFQVIVRGVAVDWSPTSINSLYNLQDFPHAGYNEMATVPSNEQLNA
        ++++F+++     +   F+   I QH W+LFC+ P+     +VRE Y N+   +   V +RGV V  S  +IN++++L D P   ++E     +  +L  
Subjt:  LKRDFLFERGFSGDLLHFLRAGITQHGWELFCSKPKPVNSQVVRELYANIDKEEGFQVIVRGVAVDWSPTSINSLYNLQDFPHAGYNEMATVPSNEQLNA

Query:  AIREVGIEGAQWRLS
         +  V I GA+W +S
Subjt:  AIREVGIEGAQWRLS

A0A6A2ZUE4 Uncharacterized protein2.9e-0827.14Show/hide
Query:  FVNHFARVKYIGMLKRDFLFERGF------SGDLLHFLRAGITQHGWELFCSKPKPVNSQVVRELYANIDKEEGFQVIVRGVAVDWSPTSINSLYNLQDF
        FV+  A+  Y  +  R   FE GF      + +L   +   +T+H W+ F   P PVN+ +V+E Y+NI +     V+VRG+++ ++PT+IN  + LQ  
Subjt:  FVNHFARVKYIGMLKRDFLFERGF------SGDLLHFLRAGITQHGWELFCSKPKPVNSQVVRELYANIDKEEGFQVIVRGVAVDWSPTSINSLYNLQDF

Query:  PHAGYNEMATVPSNEQLNAAIREVGIEGAQWRLSKTEKRT
                A    +E     + ++ + G +W   + +++T
Subjt:  PHAGYNEMATVPSNEQLNAAIREVGIEGAQWRLSKTEKRT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAAACGAGAGGAAGAAAAGAGAGAGAAGTTGAGGAGGATGTACCTGTTACGCCTGAACCTCCAAAGAAAAAGGCGAAGAAGAAAACAACTCCTGCAGAAAGGGA
AGCCAAACGACTTAAAAGACTACAAGAAGTTAAAGACTCGGAAGTATTACAGAAGATCATCGAGGACATTGCAGAAGAAGTAGTAGCTGAGGAAGAATCGAAAGATTCTG
AAAAAGAAAAAGATCTGAGAAGATTGTCAAAACAGAGCAAGAGAGTCAAGAAAAGGCAACAACGGATTTGCAAGAGCAAGAAGACTCTTGAAGATAAGGGCAAAGATATT
GCAAGAGATGAGATTGTAGCAGAAGTGGCTAGGCCAAAGGAACATAGATTACTGTATGAACGCTTTGTCAATCATTTTGCTAGGGTAAAATATATTGGCATGTTGAAGAG
AGATTTTCTATTCGAGAGGGGGTTCAGTGGTGACCTTTTGCACTTTTTAAGAGCAGGCATCACGCAGCATGGCTGGGAGTTGTTCTGTTCCAAGCCAAAACCTGTGAACT
CACAGGTGGTGCGCGAGTTATACGCGAACATCGACAAGGAAGAAGGTTTTCAAGTGATTGTTCGTGGAGTAGCTGTCGACTGGAGTCCTACATCCATCAATTCACTGTAC
AACCTTCAAGATTTCCCACATGCTGGTTATAATGAGATGGCGACAGTGCCATCTAACGAGCAGTTAAATGCTGCTATTCGAGAAGTAGGAATAGAAGGAGCACAGTGGCG
ACTGTCGAAAACCGAGAAGAGGACGTTCCAGGCTGTTTATTTGAAGAAGGAAGCCAATGAAGGATTTGGAATTCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAAACGAGAGGAAGAAAAGAGAGAGAAGTTGAGGAGGATGTACCTGTTACGCCTGAACCTCCAAAGAAAAAGGCGAAGAAGAAAACAACTCCTGCAGAAAGGGA
AGCCAAACGACTTAAAAGACTACAAGAAGTTAAAGACTCGGAAGTATTACAGAAGATCATCGAGGACATTGCAGAAGAAGTAGTAGCTGAGGAAGAATCGAAAGATTCTG
AAAAAGAAAAAGATCTGAGAAGATTGTCAAAACAGAGCAAGAGAGTCAAGAAAAGGCAACAACGGATTTGCAAGAGCAAGAAGACTCTTGAAGATAAGGGCAAAGATATT
GCAAGAGATGAGATTGTAGCAGAAGTGGCTAGGCCAAAGGAACATAGATTACTGTATGAACGCTTTGTCAATCATTTTGCTAGGGTAAAATATATTGGCATGTTGAAGAG
AGATTTTCTATTCGAGAGGGGGTTCAGTGGTGACCTTTTGCACTTTTTAAGAGCAGGCATCACGCAGCATGGCTGGGAGTTGTTCTGTTCCAAGCCAAAACCTGTGAACT
CACAGGTGGTGCGCGAGTTATACGCGAACATCGACAAGGAAGAAGGTTTTCAAGTGATTGTTCGTGGAGTAGCTGTCGACTGGAGTCCTACATCCATCAATTCACTGTAC
AACCTTCAAGATTTCCCACATGCTGGTTATAATGAGATGGCGACAGTGCCATCTAACGAGCAGTTAAATGCTGCTATTCGAGAAGTAGGAATAGAAGGAGCACAGTGGCG
ACTGTCGAAAACCGAGAAGAGGACGTTCCAGGCTGTTTATTTGAAGAAGGAAGCCAATGAAGGATTTGGAATTCCCTAA
Protein sequenceShow/hide protein sequence
MAKTRGRKEREVEEDVPVTPEPPKKKAKKKTTPAEREAKRLKRLQEVKDSEVLQKIIEDIAEEVVAEEESKDSEKEKDLRRLSKQSKRVKKRQQRICKSKKTLEDKGKDI
ARDEIVAEVARPKEHRLLYERFVNHFARVKYIGMLKRDFLFERGFSGDLLHFLRAGITQHGWELFCSKPKPVNSQVVRELYANIDKEEGFQVIVRGVAVDWSPTSINSLY
NLQDFPHAGYNEMATVPSNEQLNAAIREVGIEGAQWRLSKTEKRTFQAVYLKKEANEGFGIP