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Lag0031952 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031952
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr11:20449801..20450327
RNA-Seq ExpressionLag0031952
SyntenyLag0031952
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151688.1 uncharacterized protein LOC111019603 [Momordica charantia]1.2e-2844.71Show/hide
Query:  MYDYMNCDDRLKVRGAIFMLRDDA-RMWKSIAEAEDHANNPVSWGK-----YD------------------------VMQYERKFTELSRFSPDLVSTPD
        +Y Y+ C D+LKV+GA+FMLR +A   W  +A  EDH N P++W       YD                        V QYE+KFTE SRF+ DL+ T  
Subjt:  MYDYMNCDDRLKVRGAIFMLRDDA-RMWKSIAEAEDHANNPVSWGK-----YD------------------------VMQYERKFTELSRFSPDLVSTPD

Query:  RKIKRFVKGLQEEIRGIVALSGPTTFAETLRGAFIMDKNVAKKAQPQWREASASEVKRKPPPF-VGQPQK
        RKIKRFV+GL + I+G + L  PTT+AE ++GA +MDK+V +KAQPQ +   +S VKRK PP    QP K
Subjt:  RKIKRFVKGLQEEIRGIVALSGPTTFAETLRGAFIMDKNVAKKAQPQWREASASEVKRKPPPF-VGQPQK

XP_022155000.1 uncharacterized protein LOC111022144 [Momordica charantia]3.6e-2543.86Show/hide
Query:  YDYMNCDDRLKVRGAIFMLRDDA-RMWKSIAEAEDHANNPVSWGKY-----------------------------DVMQYERKFTELSRFSPDLVSTPDR
        Y Y+ C+D+ KV+GA+FMLR +A   W SIA AEDHAN  + W ++                              V QYERKFTELSRF+ +L+     
Subjt:  YDYMNCDDRLKVRGAIFMLRDDA-RMWKSIAEAEDHANNPVSWGKY-----------------------------DVMQYERKFTELSRFSPDLVSTPDR

Query:  KIKRFVKGLQEEIRGIVALSGPTTFAETLRGAFIMDKNVAKKAQPQWREASASEVKRKPPPFVGQPQ-KAP
        KIKRFVKGL + IRG V L  P ++AE +RGA IMDK+V+ KA       S+S VKRK  P    P  +AP
Subjt:  KIKRFVKGLQEEIRGIVALSGPTTFAETLRGAFIMDKNVAKKAQPQWREASASEVKRKPPPFVGQPQ-KAP

XP_022156326.1 uncharacterized protein LOC111023247 [Momordica charantia]4.6e-2845.96Show/hide
Query:  MYDYMNCDDRLKVRGAIFMLRDDA-RMWKSIAEAEDHANNPVSWGKY-----------------------------DVMQYERKFTELSRFSPDLVSTPD
        +Y Y+ C+D+ KV+GA+FMLR +A   W S+A AED+AN P+ W ++                              V QYERKFTELSRF+ +L+ T  
Subjt:  MYDYMNCDDRLKVRGAIFMLRDDA-RMWKSIAEAEDHANNPVSWGKY-----------------------------DVMQYERKFTELSRFSPDLVSTPD

Query:  RKIKRFVKGLQEEIRGIVALSGPTTFAETLRGAFIMDKNVAKKAQPQWREASASEVKRKPP
         KIKRFVKGL++ IRG V L  PTT+AE +RGA +MDK+V+ KA P     S+S VKRK P
Subjt:  RKIKRFVKGLQEEIRGIVALSGPTTFAETLRGAFIMDKNVAKKAQPQWREASASEVKRKPP

XP_022156546.1 uncharacterized protein LOC111023424 [Momordica charantia]2.1e-2844.19Show/hide
Query:  MYDYMNCDDRLKVRGAIFMLRDDA-RMWKSIAEAEDHANNPVSWGKY-----------------------------DVMQYERKFTELSRFSPDLVSTPD
        +Y Y+ C+D+ KV+GA+FMLR +A   W S+A  EDHAN PV W ++                              V QYERKFTELS F+ +L+ T  
Subjt:  MYDYMNCDDRLKVRGAIFMLRDDA-RMWKSIAEAEDHANNPVSWGKY-----------------------------DVMQYERKFTELSRFSPDLVSTPD

Query:  RKIKRFVKGLQEEIRGIVALSGPTTFAETLRGAFIMDKNVAKKAQPQWREASASEVKRK-PPPFVGQPQKAP
         KIKRFVKGL + IRG V L  P T+AE +RG  IMDK+V+ + QP     S+  VKRK PP +  QP +AP
Subjt:  RKIKRFVKGLQEEIRGIVALSGPTTFAETLRGAFIMDKNVAKKAQPQWREASASEVKRK-PPPFVGQPQKAP

XP_022159077.1 uncharacterized protein LOC111025517 [Momordica charantia]7.3e-2642.6Show/hide
Query:  YMNCDDRLKVRGAIFMLRDDA-RMWKSIAEAEDHANNPVSWGKY-----------------------------DVMQYERKFTELSRFSPDLVSTPDRKI
        Y++C+++ KV+G +FMLR +A   W S+A AEDHAN P++W ++                              V QYERKFTELS F+ +L+ T   KI
Subjt:  YMNCDDRLKVRGAIFMLRDDA-RMWKSIAEAEDHANNPVSWGKY-----------------------------DVMQYERKFTELSRFSPDLVSTPDRKI

Query:  KRFVKGLQEEIRGIVALSGPTTFAETLRGAFIMDKNVAKKAQPQWREASASEVKRK-PPPFVGQPQKAP
        KRFVKGL++ IRG V L  P T+AE +RG  IMD +V+   QP     S+S VKRK  P +  QP +AP
Subjt:  KRFVKGLQEEIRGIVALSGPTTFAETLRGAFIMDKNVAKKAQPQWREASASEVKRK-PPPFVGQPQKAP

TrEMBL top hitse value%identityAlignment
A0A6J1DCW8 uncharacterized protein LOC1110196035.9e-2944.71Show/hide
Query:  MYDYMNCDDRLKVRGAIFMLRDDA-RMWKSIAEAEDHANNPVSWGK-----YD------------------------VMQYERKFTELSRFSPDLVSTPD
        +Y Y+ C D+LKV+GA+FMLR +A   W  +A  EDH N P++W       YD                        V QYE+KFTE SRF+ DL+ T  
Subjt:  MYDYMNCDDRLKVRGAIFMLRDDA-RMWKSIAEAEDHANNPVSWGK-----YD------------------------VMQYERKFTELSRFSPDLVSTPD

Query:  RKIKRFVKGLQEEIRGIVALSGPTTFAETLRGAFIMDKNVAKKAQPQWREASASEVKRKPPPF-VGQPQK
        RKIKRFV+GL + I+G + L  PTT+AE ++GA +MDK+V +KAQPQ +   +S VKRK PP    QP K
Subjt:  RKIKRFVKGLQEEIRGIVALSGPTTFAETLRGAFIMDKNVAKKAQPQWREASASEVKRKPPPF-VGQPQK

A0A6J1DL73 uncharacterized protein LOC1110221441.8e-2543.86Show/hide
Query:  YDYMNCDDRLKVRGAIFMLRDDA-RMWKSIAEAEDHANNPVSWGKY-----------------------------DVMQYERKFTELSRFSPDLVSTPDR
        Y Y+ C+D+ KV+GA+FMLR +A   W SIA AEDHAN  + W ++                              V QYERKFTELSRF+ +L+     
Subjt:  YDYMNCDDRLKVRGAIFMLRDDA-RMWKSIAEAEDHANNPVSWGKY-----------------------------DVMQYERKFTELSRFSPDLVSTPDR

Query:  KIKRFVKGLQEEIRGIVALSGPTTFAETLRGAFIMDKNVAKKAQPQWREASASEVKRKPPPFVGQPQ-KAP
        KIKRFVKGL + IRG V L  P ++AE +RGA IMDK+V+ KA       S+S VKRK  P    P  +AP
Subjt:  KIKRFVKGLQEEIRGIVALSGPTTFAETLRGAFIMDKNVAKKAQPQWREASASEVKRKPPPFVGQPQ-KAP

A0A6J1DUM2 uncharacterized protein LOC1110232472.2e-2845.96Show/hide
Query:  MYDYMNCDDRLKVRGAIFMLRDDA-RMWKSIAEAEDHANNPVSWGKY-----------------------------DVMQYERKFTELSRFSPDLVSTPD
        +Y Y+ C+D+ KV+GA+FMLR +A   W S+A AED+AN P+ W ++                              V QYERKFTELSRF+ +L+ T  
Subjt:  MYDYMNCDDRLKVRGAIFMLRDDA-RMWKSIAEAEDHANNPVSWGKY-----------------------------DVMQYERKFTELSRFSPDLVSTPD

Query:  RKIKRFVKGLQEEIRGIVALSGPTTFAETLRGAFIMDKNVAKKAQPQWREASASEVKRKPP
         KIKRFVKGL++ IRG V L  PTT+AE +RGA +MDK+V+ KA P     S+S VKRK P
Subjt:  RKIKRFVKGLQEEIRGIVALSGPTTFAETLRGAFIMDKNVAKKAQPQWREASASEVKRKPP

A0A6J1DVA0 uncharacterized protein LOC1110234241.0e-2844.19Show/hide
Query:  MYDYMNCDDRLKVRGAIFMLRDDA-RMWKSIAEAEDHANNPVSWGKY-----------------------------DVMQYERKFTELSRFSPDLVSTPD
        +Y Y+ C+D+ KV+GA+FMLR +A   W S+A  EDHAN PV W ++                              V QYERKFTELS F+ +L+ T  
Subjt:  MYDYMNCDDRLKVRGAIFMLRDDA-RMWKSIAEAEDHANNPVSWGKY-----------------------------DVMQYERKFTELSRFSPDLVSTPD

Query:  RKIKRFVKGLQEEIRGIVALSGPTTFAETLRGAFIMDKNVAKKAQPQWREASASEVKRK-PPPFVGQPQKAP
         KIKRFVKGL + IRG V L  P T+AE +RG  IMDK+V+ + QP     S+  VKRK PP +  QP +AP
Subjt:  RKIKRFVKGLQEEIRGIVALSGPTTFAETLRGAFIMDKNVAKKAQPQWREASASEVKRK-PPPFVGQPQKAP

A0A6J1DYU5 uncharacterized protein LOC1110255173.6e-2642.6Show/hide
Query:  YMNCDDRLKVRGAIFMLRDDA-RMWKSIAEAEDHANNPVSWGKY-----------------------------DVMQYERKFTELSRFSPDLVSTPDRKI
        Y++C+++ KV+G +FMLR +A   W S+A AEDHAN P++W ++                              V QYERKFTELS F+ +L+ T   KI
Subjt:  YMNCDDRLKVRGAIFMLRDDA-RMWKSIAEAEDHANNPVSWGKY-----------------------------DVMQYERKFTELSRFSPDLVSTPDRKI

Query:  KRFVKGLQEEIRGIVALSGPTTFAETLRGAFIMDKNVAKKAQPQWREASASEVKRK-PPPFVGQPQKAP
        KRFVKGL++ IRG V L  P T+AE +RG  IMD +V+   QP     S+S VKRK  P +  QP +AP
Subjt:  KRFVKGLQEEIRGIVALSGPTTFAETLRGAFIMDKNVAKKAQPQWREASASEVKRK-PPPFVGQPQKAP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGACTACATGAATTGTGATGACCGTCTTAAGGTCAGAGGGGCGATATTTATGCTGAGGGATGATGCCCGCATGTGGAAATCCATAGCTGAGGCAGAAGACCATGC
TAACAACCCAGTCTCGTGGGGGAAATATGACGTGATGCAATATGAGAGGAAATTCACTGAGCTCTCCCGCTTTTCTCCAGATTTGGTTAGCACGCCAGATCGAAAAATCA
AGAGGTTCGTCAAAGGCCTCCAAGAGGAAATTAGAGGTATCGTTGCCTTGAGCGGACCCACAACATTTGCTGAGACACTTAGGGGTGCTTTCATTATGGACAAAAATGTG
GCAAAGAAAGCGCAACCTCAGTGGAGAGAAGCTTCGGCATCAGAAGTCAAAAGGAAACCTCCACCTTTTGTTGGACAACCTCAGAAGGCCCCACTATTGGGTTTTATGCC
CTAA
mRNA sequenceShow/hide mRNA sequence
ATGTATGACTACATGAATTGTGATGACCGTCTTAAGGTCAGAGGGGCGATATTTATGCTGAGGGATGATGCCCGCATGTGGAAATCCATAGCTGAGGCAGAAGACCATGC
TAACAACCCAGTCTCGTGGGGGAAATATGACGTGATGCAATATGAGAGGAAATTCACTGAGCTCTCCCGCTTTTCTCCAGATTTGGTTAGCACGCCAGATCGAAAAATCA
AGAGGTTCGTCAAAGGCCTCCAAGAGGAAATTAGAGGTATCGTTGCCTTGAGCGGACCCACAACATTTGCTGAGACACTTAGGGGTGCTTTCATTATGGACAAAAATGTG
GCAAAGAAAGCGCAACCTCAGTGGAGAGAAGCTTCGGCATCAGAAGTCAAAAGGAAACCTCCACCTTTTGTTGGACAACCTCAGAAGGCCCCACTATTGGGTTTTATGCC
CTAA
Protein sequenceShow/hide protein sequence
MYDYMNCDDRLKVRGAIFMLRDDARMWKSIAEAEDHANNPVSWGKYDVMQYERKFTELSRFSPDLVSTPDRKIKRFVKGLQEEIRGIVALSGPTTFAETLRGAFIMDKNV
AKKAQPQWREASASEVKRKPPPFVGQPQKAPLLGFMP