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Lag0031966 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031966
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr11:21069702..21071138
RNA-Seq ExpressionLag0031966
SyntenyLag0031966
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]5.6e-4660.54Show/hide
Query:  IEPHNDALVVTLIVANVKIHRILIDGGSSADVLSLTAFKAMRLGRELLKPSLTPLVGFEGERVTPEGSIKLPMTFGDGQNAVIKMINFLVRDCMSAYNAI
        + PHNDALV+TL +AN K+HRIL+DGGSS D+ SLTA+KAM LG E+LK SLTPL+GF GER+ P+G I+LP+TF     ++ +M++FLV D  S+YN I
Subjt:  IEPHNDALVVTLIVANVKIHRILIDGGSSADVLSLTAFKAMRLGRELLKPSLTPLVGFEGERVTPEGSIKLPMTFGDGQNAVIKMINFLVRDCMSAYNAI

Query:  LGRPTLHEMKAIASTYHQLLKFPTLNGVGVVKGEQKESRECYWTALK
        L RPT+H ++AI STYHQ +KFPT  GVG +KGEQ+ SRECY+T+++
Subjt:  LGRPTLHEMKAIASTYHQLLKFPTLNGVGVVKGEQKESRECYWTALK

XP_022154102.1 uncharacterized protein LOC111021438 [Momordica charantia]2.1e-4562.33Show/hide
Query:  IEPHNDALVVTLIVANVKIHRILIDGGSSADVLSLTAFKAMRLGRELLKPSLTPLVGFEGERVTPEGSIKLPMTFGDGQNAVIKMINFLVRDCMSAYNAI
        + PHNDAL++TL +AN K+HRIL+DGGSSAD +SLTA+KAM LG+E LK SLTPL+GF GERV P G I+LP+TF  G  ++ KM++FLV D  S+YNAI
Subjt:  IEPHNDALVVTLIVANVKIHRILIDGGSSADVLSLTAFKAMRLGRELLKPSLTPLVGFEGERVTPEGSIKLPMTFGDGQNAVIKMINFLVRDCMSAYNAI

Query:  LGRPTLHEMKAIASTYHQLLKFPTLNGVGVVKGEQKESRECYWTAL
        L R T++ +KAI STYHQ +KFPT  GVG +KGEQ+  RECY+T +
Subjt:  LGRPTLHEMKAIASTYHQLLKFPTLNGVGVVKGEQKESRECYWTAL

XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]2.3e-4764.63Show/hide
Query:  IEPHNDALVVTLIVANVKIHRILIDGGSSADVLSLTAFKAMRLGRELLKPSLTPLVGFEGERVTPEGSIKLPMTFGDGQNAVIKMINFLVRDCMSAYNAI
        + PHNDALV+TL +ANVK+HRIL+DGGSSAD++S TA+KAM LG ++LK S  PLVGF GERV  EG I+LP+TFG G  +V KM++FLV +  S+YNAI
Subjt:  IEPHNDALVVTLIVANVKIHRILIDGGSSADVLSLTAFKAMRLGRELLKPSLTPLVGFEGERVTPEGSIKLPMTFGDGQNAVIKMINFLVRDCMSAYNAI

Query:  LGRPTLHEMKAIASTYHQLLKFPTLNGVGVVKGEQKESRECYWTALK
        LGRPT+H +KAI STYHQ  KFPT  GVG +KGEQ+ SRECY T+++
Subjt:  LGRPTLHEMKAIASTYHQLLKFPTLNGVGVVKGEQKESRECYWTALK

XP_022158687.1 uncharacterized protein LOC111025147 [Momordica charantia]1.6e-4561.9Show/hide
Query:  IEPHNDALVVTLIVANVKIHRILIDGGSSADVLSLTAFKAMRLGRELLKPSLTPLVGFEGERVTPEGSIKLPMTFGDGQNAVIKMINFLVRDCMSAYNAI
        + PHNDALV+TL +ANVK+HRIL+DGGSSAD++S T +K M LG ++LK S  PL+GF  ERV PEG I+L +TFG G  +V KM++FLV D  S+YNAI
Subjt:  IEPHNDALVVTLIVANVKIHRILIDGGSSADVLSLTAFKAMRLGRELLKPSLTPLVGFEGERVTPEGSIKLPMTFGDGQNAVIKMINFLVRDCMSAYNAI

Query:  LGRPTLHEMKAIASTYHQLLKFPTLNGVGVVKGEQKESRECYWTALK
        LGR T+H +KAI STYHQ +KFPT  GVG +KGEQ+ SRECY+T+++
Subjt:  LGRPTLHEMKAIASTYHQLLKFPTLNGVGVVKGEQKESRECYWTALK

XP_022158943.1 uncharacterized protein LOC111025398 [Momordica charantia]8.9e-4457.58Show/hide
Query:  KLLPGKRGLNQNIEPHNDALVVTLIVANVKIHRILIDGGSSADVLSLTAFKAMRLGRELLKPSLTPLVGFEGERVTPEGSIKLPMTFGDGQNAVIKMINF
        KL   K   N    PHN  LV +L +AN K+HRIL DGGSS D++SLTA+KAM LG +LLK   TPL+GF GERV PEG I+L +TFG G  ++IKMI F
Subjt:  KLLPGKRGLNQNIEPHNDALVVTLIVANVKIHRILIDGGSSADVLSLTAFKAMRLGRELLKPSLTPLVGFEGERVTPEGSIKLPMTFGDGQNAVIKMINF

Query:  LVRDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTLNGVGVVKGEQKESRECYWTALKAVKPQR
        LV D  S+ NAIL +PT+H +K I ST+HQ LKFPTL G+G +KGEQ  SRECY+T+L+    +R
Subjt:  LVRDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTLNGVGVVKGEQKESRECYWTALKAVKPQR

TrEMBL top hitse value%identityAlignment
A0A6J1CZ14 uncharacterized protein LOC1110159012.7e-4660.54Show/hide
Query:  IEPHNDALVVTLIVANVKIHRILIDGGSSADVLSLTAFKAMRLGRELLKPSLTPLVGFEGERVTPEGSIKLPMTFGDGQNAVIKMINFLVRDCMSAYNAI
        + PHNDALV+TL +AN K+HRIL+DGGSS D+ SLTA+KAM LG E+LK SLTPL+GF GER+ P+G I+LP+TF     ++ +M++FLV D  S+YN I
Subjt:  IEPHNDALVVTLIVANVKIHRILIDGGSSADVLSLTAFKAMRLGRELLKPSLTPLVGFEGERVTPEGSIKLPMTFGDGQNAVIKMINFLVRDCMSAYNAI

Query:  LGRPTLHEMKAIASTYHQLLKFPTLNGVGVVKGEQKESRECYWTALK
        L RPT+H ++AI STYHQ +KFPT  GVG +KGEQ+ SRECY+T+++
Subjt:  LGRPTLHEMKAIASTYHQLLKFPTLNGVGVVKGEQKESRECYWTALK

A0A6J1DKR9 uncharacterized protein LOC1110214381.0e-4562.33Show/hide
Query:  IEPHNDALVVTLIVANVKIHRILIDGGSSADVLSLTAFKAMRLGRELLKPSLTPLVGFEGERVTPEGSIKLPMTFGDGQNAVIKMINFLVRDCMSAYNAI
        + PHNDAL++TL +AN K+HRIL+DGGSSAD +SLTA+KAM LG+E LK SLTPL+GF GERV P G I+LP+TF  G  ++ KM++FLV D  S+YNAI
Subjt:  IEPHNDALVVTLIVANVKIHRILIDGGSSADVLSLTAFKAMRLGRELLKPSLTPLVGFEGERVTPEGSIKLPMTFGDGQNAVIKMINFLVRDCMSAYNAI

Query:  LGRPTLHEMKAIASTYHQLLKFPTLNGVGVVKGEQKESRECYWTAL
        L R T++ +KAI STYHQ +KFPT  GVG +KGEQ+  RECY+T +
Subjt:  LGRPTLHEMKAIASTYHQLLKFPTLNGVGVVKGEQKESRECYWTAL

A0A6J1DQY2 uncharacterized protein LOC1110223211.1e-4764.63Show/hide
Query:  IEPHNDALVVTLIVANVKIHRILIDGGSSADVLSLTAFKAMRLGRELLKPSLTPLVGFEGERVTPEGSIKLPMTFGDGQNAVIKMINFLVRDCMSAYNAI
        + PHNDALV+TL +ANVK+HRIL+DGGSSAD++S TA+KAM LG ++LK S  PLVGF GERV  EG I+LP+TFG G  +V KM++FLV +  S+YNAI
Subjt:  IEPHNDALVVTLIVANVKIHRILIDGGSSADVLSLTAFKAMRLGRELLKPSLTPLVGFEGERVTPEGSIKLPMTFGDGQNAVIKMINFLVRDCMSAYNAI

Query:  LGRPTLHEMKAIASTYHQLLKFPTLNGVGVVKGEQKESRECYWTALK
        LGRPT+H +KAI STYHQ  KFPT  GVG +KGEQ+ SRECY T+++
Subjt:  LGRPTLHEMKAIASTYHQLLKFPTLNGVGVVKGEQKESRECYWTALK

A0A6J1DXH0 uncharacterized protein LOC1110253984.3e-4457.58Show/hide
Query:  KLLPGKRGLNQNIEPHNDALVVTLIVANVKIHRILIDGGSSADVLSLTAFKAMRLGRELLKPSLTPLVGFEGERVTPEGSIKLPMTFGDGQNAVIKMINF
        KL   K   N    PHN  LV +L +AN K+HRIL DGGSS D++SLTA+KAM LG +LLK   TPL+GF GERV PEG I+L +TFG G  ++IKMI F
Subjt:  KLLPGKRGLNQNIEPHNDALVVTLIVANVKIHRILIDGGSSADVLSLTAFKAMRLGRELLKPSLTPLVGFEGERVTPEGSIKLPMTFGDGQNAVIKMINF

Query:  LVRDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTLNGVGVVKGEQKESRECYWTALKAVKPQR
        LV D  S+ NAIL +PT+H +K I ST+HQ LKFPTL G+G +KGEQ  SRECY+T+L+    +R
Subjt:  LVRDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTLNGVGVVKGEQKESRECYWTALKAVKPQR

A0A6J1DXV4 uncharacterized protein LOC1110251477.9e-4661.9Show/hide
Query:  IEPHNDALVVTLIVANVKIHRILIDGGSSADVLSLTAFKAMRLGRELLKPSLTPLVGFEGERVTPEGSIKLPMTFGDGQNAVIKMINFLVRDCMSAYNAI
        + PHNDALV+TL +ANVK+HRIL+DGGSSAD++S T +K M LG ++LK S  PL+GF  ERV PEG I+L +TFG G  +V KM++FLV D  S+YNAI
Subjt:  IEPHNDALVVTLIVANVKIHRILIDGGSSADVLSLTAFKAMRLGRELLKPSLTPLVGFEGERVTPEGSIKLPMTFGDGQNAVIKMINFLVRDCMSAYNAI

Query:  LGRPTLHEMKAIASTYHQLLKFPTLNGVGVVKGEQKESRECYWTALK
        LGR T+H +KAI STYHQ +KFPT  GVG +KGEQ+ SRECY+T+++
Subjt:  LGRPTLHEMKAIASTYHQLLKFPTLNGVGVVKGEQKESRECYWTALK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGAGACAAAGGAGAACCCCTACGAGAGATCAGAACCATCTTTGGAGGACCAACTGGAGGGGGTTCGAGCAGAAAGAGGAAAGCTATTGCCAGGGAAGCGAGGGCT
GAACCAGAATATCGAGCCACATAATGATGCTCTGGTGGTCACTCTAATTGTAGCCAATGTGAAAATCCATCGGATCCTAATTGATGGAGGAAGCTCAGCTGATGTCCTTT
CTCTAACAGCCTTTAAAGCAATGCGGTTAGGGAGGGAACTCTTAAAGCCAAGCCTTACCCCACTTGTAGGATTTGAGGGAGAGAGAGTGACCCCAGAAGGTAGCATAAAA
CTTCCTATGACCTTTGGGGATGGACAGAATGCAGTGATAAAAATGATAAACTTCCTAGTTAGGGATTGTATGTCAGCCTACAATGCAATCCTAGGAAGACCAACCTTGCA
TGAGATGAAGGCCATAGCTTCAACATACCATCAGTTACTGAAGTTTCCAACTCTGAATGGTGTGGGAGTCGTCAAGGGAGAGCAGAAGGAATCAAGGGAGTGTTACTGGA
CCGCACTAAAAGCTGTCAAGCCACAGAGGGCCGAGGCCGACCAGAGAATGAGCCGAGGCCGAGCAGCACACACTTCCACCAACACTGAATCTGAACTTATGGATTTCACC
ATTAAAGTTCAGTATTCAGAAGTGTGCACAAGGCAACCGACTCAAGCATCAAGACATGCGAGCCTAGATTACCGAGTCTACTTCGCCTCATCCAGAGTGAGACCATGTGA
GTCTGGACCAACGAGTCTACCTCACCTCATCTGGCTTGAGAATTTTCACATCCTGCGAGCCTGGACTACCGAGTCTACCTCGCCTCATCCAGACTTGAGATTATGTGAGC
CTGGACCAACGAGTCTACCTCACCTCCTCTGGCTTGAGCATCTCCACATCAGGCGAGCCTGGACTACCGAGTCTACCTCGCCTGATCCAGAAGTGAGATTATGTGAGCCT
GGACCAACGAGTCTACCTCACCTCACCTCACCTGGCATGAGTCCATACACTTCATCTAAGTCAAGCTCACCCTGCAAAAGTCGGGACCGAGCACCTCTTGCCAAGGCTGA
GCACCTTGATAGCGAGCATAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGAGACAAAGGAGAACCCCTACGAGAGATCAGAACCATCTTTGGAGGACCAACTGGAGGGGGTTCGAGCAGAAAGAGGAAAGCTATTGCCAGGGAAGCGAGGGCT
GAACCAGAATATCGAGCCACATAATGATGCTCTGGTGGTCACTCTAATTGTAGCCAATGTGAAAATCCATCGGATCCTAATTGATGGAGGAAGCTCAGCTGATGTCCTTT
CTCTAACAGCCTTTAAAGCAATGCGGTTAGGGAGGGAACTCTTAAAGCCAAGCCTTACCCCACTTGTAGGATTTGAGGGAGAGAGAGTGACCCCAGAAGGTAGCATAAAA
CTTCCTATGACCTTTGGGGATGGACAGAATGCAGTGATAAAAATGATAAACTTCCTAGTTAGGGATTGTATGTCAGCCTACAATGCAATCCTAGGAAGACCAACCTTGCA
TGAGATGAAGGCCATAGCTTCAACATACCATCAGTTACTGAAGTTTCCAACTCTGAATGGTGTGGGAGTCGTCAAGGGAGAGCAGAAGGAATCAAGGGAGTGTTACTGGA
CCGCACTAAAAGCTGTCAAGCCACAGAGGGCCGAGGCCGACCAGAGAATGAGCCGAGGCCGAGCAGCACACACTTCCACCAACACTGAATCTGAACTTATGGATTTCACC
ATTAAAGTTCAGTATTCAGAAGTGTGCACAAGGCAACCGACTCAAGCATCAAGACATGCGAGCCTAGATTACCGAGTCTACTTCGCCTCATCCAGAGTGAGACCATGTGA
GTCTGGACCAACGAGTCTACCTCACCTCATCTGGCTTGAGAATTTTCACATCCTGCGAGCCTGGACTACCGAGTCTACCTCGCCTCATCCAGACTTGAGATTATGTGAGC
CTGGACCAACGAGTCTACCTCACCTCCTCTGGCTTGAGCATCTCCACATCAGGCGAGCCTGGACTACCGAGTCTACCTCGCCTGATCCAGAAGTGAGATTATGTGAGCCT
GGACCAACGAGTCTACCTCACCTCACCTCACCTGGCATGAGTCCATACACTTCATCTAAGTCAAGCTCACCCTGCAAAAGTCGGGACCGAGCACCTCTTGCCAAGGCTGA
GCACCTTGATAGCGAGCATAGCTAG
Protein sequenceShow/hide protein sequence
MAETKENPYERSEPSLEDQLEGVRAERGKLLPGKRGLNQNIEPHNDALVVTLIVANVKIHRILIDGGSSADVLSLTAFKAMRLGRELLKPSLTPLVGFEGERVTPEGSIK
LPMTFGDGQNAVIKMINFLVRDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTLNGVGVVKGEQKESRECYWTALKAVKPQRAEADQRMSRGRAAHTSTNTESELMDFT
IKVQYSEVCTRQPTQASRHASLDYRVYFASSRVRPCESGPTSLPHLIWLENFHILRAWTTESTSPHPDLRLCEPGPTSLPHLLWLEHLHIRRAWTTESTSPDPEVRLCEP
GPTSLPHLTSPGMSPYTSSKSSSPCKSRDRAPLAKAEHLDSEHS