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Lag0031986 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031986
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon gag protein
Genome locationchr11:21821901..21823527
RNA-Seq ExpressionLag0031986
SyntenyLag0031986
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025725.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.2e-1963.83Show/hide
Query:  MSMAATEEENQCSMSTSTRPSAFQRLNVSTSKKSRSSTSVFDRLKVTNDQPQRKIDNLDVKLFNEVGGDKKLQSSISSRMKRKFSVLINTEGSL
        +SMA  EEENQC  ST  R SAF+RL++STSKK R STS FDRLK+TNDQ QR++ +L  K F+E   D K++S +SSRMKRK SV INTEGSL
Subjt:  MSMAATEEENQCSMSTSTRPSAFQRLNVSTSKKSRSSTSVFDRLKVTNDQPQRKIDNLDVKLFNEVGGDKKLQSSISSRMKRKFSVLINTEGSL

KAA0036008.1 Retrotransposon gag protein [Cucumis melo var. makuwa]3.6e-1962.77Show/hide
Query:  MSMAATEEENQCSMSTSTRPSAFQRLNVSTSKKSRSSTSVFDRLKVTNDQPQRKIDNLDVKLFNEVGGDKKLQSSISSRMKRKFSVLINTEGSL
        +SMA  EEENQC MST  R SAF+RL++STSKK R STS FDRLK+TNDQ QR++ +   K F+E   D K+ S + SRMKRK SV INTEGSL
Subjt:  MSMAATEEENQCSMSTSTRPSAFQRLNVSTSKKSRSSTSVFDRLKVTNDQPQRKIDNLDVKLFNEVGGDKKLQSSISSRMKRKFSVLINTEGSL

KAA0050734.1 gag protease polyprotein [Cucumis melo var. makuwa]9.5e-2063.83Show/hide
Query:  MSMAATEEENQCSMSTSTRPSAFQRLNVSTSKKSRSSTSVFDRLKVTNDQPQRKIDNLDVKLFNEVGGDKKLQSSISSRMKRKFSVLINTEGSL
        +SMA  EEENQC  ST  R SAF+RL++STSKK R STS FDRLK+TNDQ QR++ +L  K F+E  GD K+ S + SRMKRK SV INTEGSL
Subjt:  MSMAATEEENQCSMSTSTRPSAFQRLNVSTSKKSRSSTSVFDRLKVTNDQPQRKIDNLDVKLFNEVGGDKKLQSSISSRMKRKFSVLINTEGSL

KAA0057874.1 gag protease polyprotein [Cucumis melo var. makuwa]6.1e-1964.13Show/hide
Query:  MAATEEENQCSMSTSTRPSAFQRLNVSTSKKSRSSTSVFDRLKVTNDQPQRKIDNLDVKLFNEVGGDKKLQSSISSRMKRKFSVLINTEGSL
        MA  EEENQC  ST TR SAF+RL++STSKK R STS FDRLK+TNDQ QR++  L  K F+E   D K+ + +SSRMKRK SV INTEGSL
Subjt:  MAATEEENQCSMSTSTRPSAFQRLNVSTSKKSRSSTSVFDRLKVTNDQPQRKIDNLDVKLFNEVGGDKKLQSSISSRMKRKFSVLINTEGSL

TYK30263.1 gag protease polyprotein [Cucumis melo var. makuwa]1.6e-1963.83Show/hide
Query:  MSMAATEEENQCSMSTSTRPSAFQRLNVSTSKKSRSSTSVFDRLKVTNDQPQRKIDNLDVKLFNEVGGDKKLQSSISSRMKRKFSVLINTEGSL
        +SMA  EEENQC  ST TR SAF+RL++STSKK R STS FDR K+TN+Q QR+I +L  KLF+E  GD K+ S + SRMKRK SV INTE SL
Subjt:  MSMAATEEENQCSMSTSTRPSAFQRLNVSTSKKSRSSTSVFDRLKVTNDQPQRKIDNLDVKLFNEVGGDKKLQSSISSRMKRKFSVLINTEGSL

TrEMBL top hitse value%identityAlignment
A0A5A7SMQ5 Retrotransposon gag protein6.0e-2063.83Show/hide
Query:  MSMAATEEENQCSMSTSTRPSAFQRLNVSTSKKSRSSTSVFDRLKVTNDQPQRKIDNLDVKLFNEVGGDKKLQSSISSRMKRKFSVLINTEGSL
        +SMA  EEENQC  ST  R SAF+RL++STSKK R STS FDRLK+TNDQ QR++ +L  K F+E   D K++S +SSRMKRK SV INTEGSL
Subjt:  MSMAATEEENQCSMSTSTRPSAFQRLNVSTSKKSRSSTSVFDRLKVTNDQPQRKIDNLDVKLFNEVGGDKKLQSSISSRMKRKFSVLINTEGSL

A0A5A7SZJ7 Retrotransposon gag protein1.7e-1962.77Show/hide
Query:  MSMAATEEENQCSMSTSTRPSAFQRLNVSTSKKSRSSTSVFDRLKVTNDQPQRKIDNLDVKLFNEVGGDKKLQSSISSRMKRKFSVLINTEGSL
        +SMA  EEENQC MST  R SAF+RL++STSKK R STS FDRLK+TNDQ QR++ +   K F+E   D K+ S + SRMKRK SV INTEGSL
Subjt:  MSMAATEEENQCSMSTSTRPSAFQRLNVSTSKKSRSSTSVFDRLKVTNDQPQRKIDNLDVKLFNEVGGDKKLQSSISSRMKRKFSVLINTEGSL

A0A5A7TQ06 Retrotransposon gag protein3.0e-1962.77Show/hide
Query:  MSMAATEEENQCSMSTSTRPSAFQRLNVSTSKKSRSSTSVFDRLKVTNDQPQRKIDNLDVKLFNEVGGDKKLQSSISSRMKRKFSVLINTEGSL
        +SMA  EEENQC  ST  R SAF+RL++STSKK R STS FDRLK+TNDQ QR++ +L  K F+E   D K+ S + SRMKRK SV INTEGSL
Subjt:  MSMAATEEENQCSMSTSTRPSAFQRLNVSTSKKSRSSTSVFDRLKVTNDQPQRKIDNLDVKLFNEVGGDKKLQSSISSRMKRKFSVLINTEGSL

A0A5D3BBF9 Gag protease polyprotein4.6e-2063.83Show/hide
Query:  MSMAATEEENQCSMSTSTRPSAFQRLNVSTSKKSRSSTSVFDRLKVTNDQPQRKIDNLDVKLFNEVGGDKKLQSSISSRMKRKFSVLINTEGSL
        +SMA  EEENQC  ST  R SAF+RL++STSKK R STS FDRLK+TNDQ QR++ +L  K F+E  GD K+ S + SRMKRK SV INTEGSL
Subjt:  MSMAATEEENQCSMSTSTRPSAFQRLNVSTSKKSRSSTSVFDRLKVTNDQPQRKIDNLDVKLFNEVGGDKKLQSSISSRMKRKFSVLINTEGSL

A0A5D3E2D7 Gag protease polyprotein7.8e-2063.83Show/hide
Query:  MSMAATEEENQCSMSTSTRPSAFQRLNVSTSKKSRSSTSVFDRLKVTNDQPQRKIDNLDVKLFNEVGGDKKLQSSISSRMKRKFSVLINTEGSL
        +SMA  EEENQC  ST TR SAF+RL++STSKK R STS FDR K+TN+Q QR+I +L  KLF+E  GD K+ S + SRMKRK SV INTE SL
Subjt:  MSMAATEEENQCSMSTSTRPSAFQRLNVSTSKKSRSSTSVFDRLKVTNDQPQRKIDNLDVKLFNEVGGDKKLQSSISSRMKRKFSVLINTEGSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTATGGCCGCGACAGAAGAAGAAAATCAATGTTCGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAATGTCTCCACATCGAAGAAAAGTCGATCTTC
AACATCTGTCTTTGATCGCCTCAAAGTAACAAACGATCAACCACAAAGAAAGATAGATAATTTAGATGTGAAATTGTTCAATGAAGTAGGCGGTGACAAGAAGCTTCAAA
GTAGCATTTCGTCACGTATGAAGAGGAAGTTCTCTGTTCTCATAAATACAGAAGGTTCCTTGAAGTTCCTTCTCTCCAAGTTCAAAGCAACTCAGTTCCTTCTCTCCAAG
TTCGTAGGTGAGCTCAATCTCCTACCTCCAAGTCCGAAGGTTCTCACGTTTCTTCGCTACAGCTTCCTCCCTCCAAGTCCGTCGCGAAGTGTCTTCCCTACTATTCTCCG
GGCCAAGAACGACTTGTGGGAGTCTATAGAGATAGGGAATGGGAAGGGAATGCTTGATGGTTCAAGCACTAGAGAGATATATGGAGATGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTATGGCCGCGACAGAAGAAGAAAATCAATGTTCGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAATGTCTCCACATCGAAGAAAAGTCGATCTTC
AACATCTGTCTTTGATCGCCTCAAAGTAACAAACGATCAACCACAAAGAAAGATAGATAATTTAGATGTGAAATTGTTCAATGAAGTAGGCGGTGACAAGAAGCTTCAAA
GTAGCATTTCGTCACGTATGAAGAGGAAGTTCTCTGTTCTCATAAATACAGAAGGTTCCTTGAAGTTCCTTCTCTCCAAGTTCAAAGCAACTCAGTTCCTTCTCTCCAAG
TTCGTAGGTGAGCTCAATCTCCTACCTCCAAGTCCGAAGGTTCTCACGTTTCTTCGCTACAGCTTCCTCCCTCCAAGTCCGTCGCGAAGTGTCTTCCCTACTATTCTCCG
GGCCAAGAACGACTTGTGGGAGTCTATAGAGATAGGGAATGGGAAGGGAATGCTTGATGGTTCAAGCACTAGAGAGATATATGGAGATGAGTGA
Protein sequenceShow/hide protein sequence
MSMAATEEENQCSMSTSTRPSAFQRLNVSTSKKSRSSTSVFDRLKVTNDQPQRKIDNLDVKLFNEVGGDKKLQSSISSRMKRKFSVLINTEGSLKFLLSKFKATQFLLSK
FVGELNLLPPSPKVLTFLRYSFLPPSPSRSVFPTILRAKNDLWESIEIGNGKGMLDGSSTREIYGDE