; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0031993 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031993
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr11:21992348..21992951
RNA-Seq ExpressionLag0031993
SyntenyLag0031993
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]1.5e-3042.7Show/hide
Query:  MYSLLLDENSPKLEFTKKEVAGICHPHNDALVVTLTVANAKVHRILIDGGSSADVLSTTAFDAMKLGSDHLKPSLTPLNEDDQLLGGRRV----------
        +Y   + + S K+EF++ E   + HPHNDALV+TL +ANAKVHRIL+DGGSS D+ S TA+ AM LG + LK SLTPL       GG R+          
Subjt:  MYSLLLDENSPKLEFTKKEVAGICHPHNDALVVTLTVANAKVHRILIDGGSSADVLSTTAFDAMKLGSDHLKPSLTPLNEDDQLLGGRRV----------

Query:  ---------------------PTFNAILGRPTLHGLKAVASIYHQVLKFPTEEGVRAVYGEQKMSRECYFMALKNIDR
                              ++N IL RPT+H L+A+ S YHQ +KFPT  GV  + GEQ++SRECY+ +++  D+
Subjt:  ---------------------PTFNAILGRPTLHGLKAVASIYHQVLKFPTEEGVRAVYGEQKMSRECYFMALKNIDR

XP_022150028.1 uncharacterized protein LOC111018300 [Momordica charantia]4.9e-2941.18Show/hide
Query:  MYSLLLDENSPKLEFTKKEVAGICHPHNDALVVTLTVANAKVHRILIDGGSSADVLSTTAFDAMKLGSDHLKPSLTPLNEDDQLLGGRRVP---------
        +Y   + +   K+EF++ E   + HPHND LV+TL +ANAKVHRIL+DGGSSAD++S TA+ AM LG    K S   L    +  G R +P         
Subjt:  MYSLLLDENSPKLEFTKKEVAGICHPHNDALVVTLTVANAKVHRILIDGGSSADVLSTTAFDAMKLGSDHLKPSLTPLNEDDQLLGGRRVP---------

Query:  ---------------------TFNAILGRPTLHGLKAVASIYHQVLKFPTEEGVRAVYGEQKMSRECYFMALKNIDRKVQATTASGY
                             ++NAILGRPT+H LKA+ S YHQ + FPT  G+  +  EQ++SRECY+ ++K  DR   A+TA G+
Subjt:  ---------------------TFNAILGRPTLHGLKAVASIYHQVLKFPTEEGVRAVYGEQKMSRECYFMALKNIDRKVQATTASGY

XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]9.9e-3043.68Show/hide
Query:  MYSLLLDENSPKLEFTKKEVAGICHPHNDALVVTLTVANAKVHRILIDGGSSADVLSTTAFDAMKLGSDHLKPSLTPL---NEDDQLLGGR---------
        +Y   +      +EF++ E   + HPHNDALV+TL +AN KVHRIL+DGGSSAD++S TA+ AM LG   LK S  PL     +  +L GR         
Subjt:  MYSLLLDENSPKLEFTKKEVAGICHPHNDALVVTLTVANAKVHRILIDGGSSADVLSTTAFDAMKLGSDHLKPSLTPL---NEDDQLLGGR---------

Query:  ---------------RVPTFNAILGRPTLHGLKAVASIYHQVLKFPTEEGVRAVYGEQKMSRECYFMALKNIDR
                          ++NAILGRPT+H LKA+ S YHQ  KFPT  GV  + GEQ++SRECY  ++++ DR
Subjt:  ---------------RVPTFNAILGRPTLHGLKAVASIYHQVLKFPTEEGVRAVYGEQKMSRECYFMALKNIDR

XP_022155902.1 uncharacterized protein LOC111022905 [Momordica charantia]1.7e-2943.86Show/hide
Query:  MYSLLLDENSPKLEFTKKEVAGICHPHNDALVVTLTVANAKVHRILIDGGSSADVLSTTAFDAMKLGSDHLKPSLTPLNEDDQLLGGR------------
        +Y   + + S  +EF+K E   + HPHNDALV+TL +AN KVHRIL+DGG+SAD++S TA+  M +G   LK + TPL     +L GR            
Subjt:  MYSLLLDENSPKLEFTKKEVAGICHPHNDALVVTLTVANAKVHRILIDGGSSADVLSTTAFDAMKLGSDHLKPSLTPLNEDDQLLGGR------------

Query:  ------------RVPTFNAILGRPTLHGLKAVASIYHQVLKFPTEEGVRAVYGEQKMSRECYFMALKNIDR
                       ++NAILGR T+H LKA+ S YHQ +KFPT  GV  + GEQ++SRECY+ ++K  DR
Subjt:  ------------RVPTFNAILGRPTLHGLKAVASIYHQVLKFPTEEGVRAVYGEQKMSRECYFMALKNIDR

XP_022158093.1 uncharacterized protein LOC111024662 [Momordica charantia]6.4e-2942.53Show/hide
Query:  KLEFTKKEVAGICHPHNDALVVTLTVANAKVHRILIDGGSSADVLSTTAFDAMKLGSDHLKPSLTPLNEDDQLLGGRRV---------------------
        K++F++ E   + HPHNDALV+TL + N KVHRIL+DGGSS  ++S TA+ AM LG   LK +L PL       GG RV                     
Subjt:  KLEFTKKEVAGICHPHNDALVVTLTVANAKVHRILIDGGSSADVLSTTAFDAMKLGSDHLKPSLTPLNEDDQLLGGRRV---------------------

Query:  ----------PTFNAILGRPTLHGLKAVASIYHQVLKFPTEEGVRAVYGEQKMSRECYFMALKNIDRKVQATTA
                   ++NAILGRPT+H LKA+ S YH+ LKFPT+ G+  V GEQ++S ECY+ +L+  D   +A+T+
Subjt:  ----------PTFNAILGRPTLHGLKAVASIYHQVLKFPTEEGVRAVYGEQKMSRECYFMALKNIDRKVQATTA

TrEMBL top hitse value%identityAlignment
A0A6J1CZ14 uncharacterized protein LOC1110159017.4e-3142.7Show/hide
Query:  MYSLLLDENSPKLEFTKKEVAGICHPHNDALVVTLTVANAKVHRILIDGGSSADVLSTTAFDAMKLGSDHLKPSLTPLNEDDQLLGGRRV----------
        +Y   + + S K+EF++ E   + HPHNDALV+TL +ANAKVHRIL+DGGSS D+ S TA+ AM LG + LK SLTPL       GG R+          
Subjt:  MYSLLLDENSPKLEFTKKEVAGICHPHNDALVVTLTVANAKVHRILIDGGSSADVLSTTAFDAMKLGSDHLKPSLTPLNEDDQLLGGRRV----------

Query:  ---------------------PTFNAILGRPTLHGLKAVASIYHQVLKFPTEEGVRAVYGEQKMSRECYFMALKNIDR
                              ++N IL RPT+H L+A+ S YHQ +KFPT  GV  + GEQ++SRECY+ +++  D+
Subjt:  ---------------------PTFNAILGRPTLHGLKAVASIYHQVLKFPTEEGVRAVYGEQKMSRECYFMALKNIDR

A0A6J1D8C9 uncharacterized protein LOC1110183002.4e-2941.18Show/hide
Query:  MYSLLLDENSPKLEFTKKEVAGICHPHNDALVVTLTVANAKVHRILIDGGSSADVLSTTAFDAMKLGSDHLKPSLTPLNEDDQLLGGRRVP---------
        +Y   + +   K+EF++ E   + HPHND LV+TL +ANAKVHRIL+DGGSSAD++S TA+ AM LG    K S   L    +  G R +P         
Subjt:  MYSLLLDENSPKLEFTKKEVAGICHPHNDALVVTLTVANAKVHRILIDGGSSADVLSTTAFDAMKLGSDHLKPSLTPLNEDDQLLGGRRVP---------

Query:  ---------------------TFNAILGRPTLHGLKAVASIYHQVLKFPTEEGVRAVYGEQKMSRECYFMALKNIDRKVQATTASGY
                             ++NAILGRPT+H LKA+ S YHQ + FPT  G+  +  EQ++SRECY+ ++K  DR   A+TA G+
Subjt:  ---------------------TFNAILGRPTLHGLKAVASIYHQVLKFPTEEGVRAVYGEQKMSRECYFMALKNIDRKVQATTASGY

A0A6J1DQL9 uncharacterized protein LOC1110229058.2e-3043.86Show/hide
Query:  MYSLLLDENSPKLEFTKKEVAGICHPHNDALVVTLTVANAKVHRILIDGGSSADVLSTTAFDAMKLGSDHLKPSLTPLNEDDQLLGGR------------
        +Y   + + S  +EF+K E   + HPHNDALV+TL +AN KVHRIL+DGG+SAD++S TA+  M +G   LK + TPL     +L GR            
Subjt:  MYSLLLDENSPKLEFTKKEVAGICHPHNDALVVTLTVANAKVHRILIDGGSSADVLSTTAFDAMKLGSDHLKPSLTPLNEDDQLLGGR------------

Query:  ------------RVPTFNAILGRPTLHGLKAVASIYHQVLKFPTEEGVRAVYGEQKMSRECYFMALKNIDR
                       ++NAILGR T+H LKA+ S YHQ +KFPT  GV  + GEQ++SRECY+ ++K  DR
Subjt:  ------------RVPTFNAILGRPTLHGLKAVASIYHQVLKFPTEEGVRAVYGEQKMSRECYFMALKNIDR

A0A6J1DQY2 uncharacterized protein LOC1110223214.8e-3043.68Show/hide
Query:  MYSLLLDENSPKLEFTKKEVAGICHPHNDALVVTLTVANAKVHRILIDGGSSADVLSTTAFDAMKLGSDHLKPSLTPL---NEDDQLLGGR---------
        +Y   +      +EF++ E   + HPHNDALV+TL +AN KVHRIL+DGGSSAD++S TA+ AM LG   LK S  PL     +  +L GR         
Subjt:  MYSLLLDENSPKLEFTKKEVAGICHPHNDALVVTLTVANAKVHRILIDGGSSADVLSTTAFDAMKLGSDHLKPSLTPL---NEDDQLLGGR---------

Query:  ---------------RVPTFNAILGRPTLHGLKAVASIYHQVLKFPTEEGVRAVYGEQKMSRECYFMALKNIDR
                          ++NAILGRPT+H LKA+ S YHQ  KFPT  GV  + GEQ++SRECY  ++++ DR
Subjt:  ---------------RVPTFNAILGRPTLHGLKAVASIYHQVLKFPTEEGVRAVYGEQKMSRECYFMALKNIDR

A0A6J1DV51 uncharacterized protein LOC1110246623.1e-2942.53Show/hide
Query:  KLEFTKKEVAGICHPHNDALVVTLTVANAKVHRILIDGGSSADVLSTTAFDAMKLGSDHLKPSLTPLNEDDQLLGGRRV---------------------
        K++F++ E   + HPHNDALV+TL + N KVHRIL+DGGSS  ++S TA+ AM LG   LK +L PL       GG RV                     
Subjt:  KLEFTKKEVAGICHPHNDALVVTLTVANAKVHRILIDGGSSADVLSTTAFDAMKLGSDHLKPSLTPLNEDDQLLGGRRV---------------------

Query:  ----------PTFNAILGRPTLHGLKAVASIYHQVLKFPTEEGVRAVYGEQKMSRECYFMALKNIDRKVQATTA
                   ++NAILGRPT+H LKA+ S YH+ LKFPT+ G+  V GEQ++S ECY+ +L+  D   +A+T+
Subjt:  ----------PTFNAILGRPTLHGLKAVASIYHQVLKFPTEEGVRAVYGEQKMSRECYFMALKNIDRKVQATTA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACTCACTCCTACTTGATGAAAACTCACCAAAGTTAGAGTTTACAAAGAAGGAGGTTGCGGGAATATGTCATCCGCACAACGACGCGCTAGTAGTCACTCTAACGGT
TGCCAACGCAAAGGTCCACCGGATCCTCATTGATGGGGGAAGTTCTGCTGATGTGCTCTCAACTACTGCGTTCGACGCCATGAAGCTGGGGAGTGATCACCTGAAGCCGA
GCCTCACGCCACTTAACGAGGATGATCAACTTCTTGGTGGTAGACGCGTCCCGACGTTCAATGCCATCTTGGGACGACCCACCCTACATGGGCTCAAAGCTGTGGCTTCA
ATCTACCACCAAGTCCTGAAGTTCCCAACTGAAGAAGGTGTAAGGGCAGTGTATGGCGAGCAGAAAATGTCAAGGGAATGCTACTTTATGGCACTCAAGAACATCGACAG
GAAAGTTCAAGCAACGACAGCCTCGGGATATGGTCGAGGCCGAGCAGTTGAAGGGGCAAGTTTTCCCCTCCCAATGGAACATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTACTCACTCCTACTTGATGAAAACTCACCAAAGTTAGAGTTTACAAAGAAGGAGGTTGCGGGAATATGTCATCCGCACAACGACGCGCTAGTAGTCACTCTAACGGT
TGCCAACGCAAAGGTCCACCGGATCCTCATTGATGGGGGAAGTTCTGCTGATGTGCTCTCAACTACTGCGTTCGACGCCATGAAGCTGGGGAGTGATCACCTGAAGCCGA
GCCTCACGCCACTTAACGAGGATGATCAACTTCTTGGTGGTAGACGCGTCCCGACGTTCAATGCCATCTTGGGACGACCCACCCTACATGGGCTCAAAGCTGTGGCTTCA
ATCTACCACCAAGTCCTGAAGTTCCCAACTGAAGAAGGTGTAAGGGCAGTGTATGGCGAGCAGAAAATGTCAAGGGAATGCTACTTTATGGCACTCAAGAACATCGACAG
GAAAGTTCAAGCAACGACAGCCTCGGGATATGGTCGAGGCCGAGCAGTTGAAGGGGCAAGTTTTCCCCTCCCAATGGAACATTAA
Protein sequenceShow/hide protein sequence
MYSLLLDENSPKLEFTKKEVAGICHPHNDALVVTLTVANAKVHRILIDGGSSADVLSTTAFDAMKLGSDHLKPSLTPLNEDDQLLGGRRVPTFNAILGRPTLHGLKAVAS
IYHQVLKFPTEEGVRAVYGEQKMSRECYFMALKNIDRKVQATTASGYGRGRAVEGASFPLPMEH