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Lag0031994 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031994
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr11:21993031..21994293
RNA-Seq ExpressionLag0031994
SyntenyLag0031994
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG63304.1 hypothetical protein EZV62_010298 [Acer yangbiense]2.6e-1253.85Show/hide
Query:  LLKRPEKLRSDPDRRNRNKYCMLHGDHDHTTRECIQLRDEIETLIREGYLKEFVGVT-EARGHCQQTKARVVPTHRSR
        LL +PE LR DP  RN+ KYC  H D  HTT EC  L+D IETLIR GYLKEF+ +T EAR     T  R  P H  +
Subjt:  LLKRPEKLRSDPDRRNRNKYCMLHGDHDHTTRECIQLRDEIETLIREGYLKEFVGVT-EARGHCQQTKARVVPTHRSR

TXG66066.1 hypothetical protein EZV62_007341 [Acer yangbiense]1.4e-1355.13Show/hide
Query:  LLKRPEKLRSDPDRRNRNKYCMLHGDHDHTTRECIQLRDEIETLIREGYLKEFVGVT-EARGHCQQTKARVVPTHRSR
        LL +PE LR +P RRN+ KYC  HGD  HTT EC  L+D IETLIR GYLKEF+ +T EAR     T  R  P H  +
Subjt:  LLKRPEKLRSDPDRRNRNKYCMLHGDHDHTTRECIQLRDEIETLIREGYLKEFVGVT-EARGHCQQTKARVVPTHRSR

TXG71857.1 hypothetical protein EZV62_000436 [Acer yangbiense]7.9e-1456.41Show/hide
Query:  LLKRPEKLRSDPDRRNRNKYCMLHGDHDHTTRECIQLRDEIETLIREGYLKEFVGVT-EARGHCQQTKARVVPTHRSR
        LL +PE LR DP RRN+ KYC  HGD  HTT EC  L+D IETLIR GYLKEF+ +T EAR     T  R  P H  +
Subjt:  LLKRPEKLRSDPDRRNRNKYCMLHGDHDHTTRECIQLRDEIETLIREGYLKEFVGVT-EARGHCQQTKARVVPTHRSR

XP_022149419.1 uncharacterized protein LOC111017849 [Momordica charantia]2.6e-1242.53Show/hide
Query:  GPTKVEGYDDGVALTV----VISGLGRDTGHNLLKRPEKLRSDPDRRNRNKYCMLHGDHDHTTRECIQLRDEIETLIREGYLKEFVG
        GPT+   Y+    +T+    +++ +       LLKRPEKLR  P+RR+++KYC  H +HDH T +C +L+ +IE LI++GY K+FVG
Subjt:  GPTKVEGYDDGVALTV----VISGLGRDTGHNLLKRPEKLRSDPDRRNRNKYCMLHGDHDHTTRECIQLRDEIETLIREGYLKEFVG

XP_024024791.1 uncharacterized protein LOC112092009 [Morus notabilis]2.0e-1248.39Show/hide
Query:  YDDGVALTVVISGLGRDTGH-NLLKRPEKLRSDPDRRNRNKYCMLHGDHDHTTRECIQLRDEIETLIREGYLKEFVGVTEAR--GHCQQTKAR
        YD    LTV +  +    G  NLL+RPE +RSDP RRN+ KYC  HGD  H T +C  L+DEIE +IREG L+EF      R  GH  Q  +R
Subjt:  YDDGVALTVVISGLGRDTGH-NLLKRPEKLRSDPDRRNRNKYCMLHGDHDHTTRECIQLRDEIETLIREGYLKEFVGVTEAR--GHCQQTKAR

TrEMBL top hitse value%identityAlignment
A0A5C7I2G6 Uncharacterized protein1.2e-1253.85Show/hide
Query:  LLKRPEKLRSDPDRRNRNKYCMLHGDHDHTTRECIQLRDEIETLIREGYLKEFVGVT-EARGHCQQTKARVVPTHRSR
        LL +PE LR DP  RN+ KYC  H D  HTT EC  L+D IETLIR GYLKEF+ +T EAR     T  R  P H  +
Subjt:  LLKRPEKLRSDPDRRNRNKYCMLHGDHDHTTRECIQLRDEIETLIREGYLKEFVGVT-EARGHCQQTKARVVPTHRSR

A0A5C7IC82 Uncharacterized protein6.6e-1455.13Show/hide
Query:  LLKRPEKLRSDPDRRNRNKYCMLHGDHDHTTRECIQLRDEIETLIREGYLKEFVGVT-EARGHCQQTKARVVPTHRSR
        LL +PE LR +P RRN+ KYC  HGD  HTT EC  L+D IETLIR GYLKEF+ +T EAR     T  R  P H  +
Subjt:  LLKRPEKLRSDPDRRNRNKYCMLHGDHDHTTRECIQLRDEIETLIREGYLKEFVGVT-EARGHCQQTKARVVPTHRSR

A0A5C7IR28 Retrotrans_gag domain-containing protein3.8e-1456.41Show/hide
Query:  LLKRPEKLRSDPDRRNRNKYCMLHGDHDHTTRECIQLRDEIETLIREGYLKEFVGVT-EARGHCQQTKARVVPTHRSR
        LL +PE LR DP RRN+ KYC  HGD  HTT EC  L+D IETLIR GYLKEF+ +T EAR     T  R  P H  +
Subjt:  LLKRPEKLRSDPDRRNRNKYCMLHGDHDHTTRECIQLRDEIETLIREGYLKEFVGVT-EARGHCQQTKARVVPTHRSR

A0A6J1D4A4 uncharacterized protein LOC1110174701.2e-1242.53Show/hide
Query:  GPTKVEGYDDGVALTV----VISGLGRDTGHNLLKRPEKLRSDPDRRNRNKYCMLHGDHDHTTRECIQLRDEIETLIREGYLKEFVG
        GP++   Y+     T+    +++ +       LLKRPEKL+ DP++RN++KYC  H DHDH T  C +L+ +IE LI++GY K+FVG
Subjt:  GPTKVEGYDDGVALTV----VISGLGRDTGHNLLKRPEKLRSDPDRRNRNKYCMLHGDHDHTTRECIQLRDEIETLIREGYLKEFVG

A0A6J1D701 uncharacterized protein LOC1110178491.2e-1242.53Show/hide
Query:  GPTKVEGYDDGVALTV----VISGLGRDTGHNLLKRPEKLRSDPDRRNRNKYCMLHGDHDHTTRECIQLRDEIETLIREGYLKEFVG
        GPT+   Y+    +T+    +++ +       LLKRPEKLR  P+RR+++KYC  H +HDH T +C +L+ +IE LI++GY K+FVG
Subjt:  GPTKVEGYDDGVALTV----VISGLGRDTGHNLLKRPEKLRSDPDRRNRNKYCMLHGDHDHTTRECIQLRDEIETLIREGYLKEFVG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCCTCCCGGGGACGACCAGACCCAGAAGGAAGCTGGGCCGAGCCGCAAAAAGGCCCGCAGGAGTTCTCCGCTAAAAAAAATGCCAGAAGGATCCGAAATAGCACC
TAGATGCATACCAGACTTGGATGGACTTTCATGGGGCGAACGAAGCAACAAGGTGTCGAGCTTTTGCACTAACGCTCACAGGTTTAGCAAGGTAGTGGTTTGGCAAGGTC
CCACGAAGGTGGAGGGTTACGATGATGGAGTTGCTTTGACTGTTGTGATTTCAGGTCTTGGCCGCGATACAGGACACAATCTGTTGAAACGCCCAGAAAAGTTGAGATCA
GATCCCGACAGGAGAAACAGGAACAAATATTGCATGTTACACGGAGATCACGACCATACAACCAGAGAATGCATCCAGTTACGAGATGAGATAGAAACCCTAATCCGAGA
GGGTTACCTCAAGGAATTCGTGGGAGTGACAGAAGCAAGAGGCCACTGCCAGCAGACCAAGGCAAGGGTGGTGCCAACCCACCGCTCGAGATTCGAACCATTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTCCTCCCGGGGACGACCAGACCCAGAAGGAAGCTGGGCCGAGCCGCAAAAAGGCCCGCAGGAGTTCTCCGCTAAAAAAAATGCCAGAAGGATCCGAAATAGCACC
TAGATGCATACCAGACTTGGATGGACTTTCATGGGGCGAACGAAGCAACAAGGTGTCGAGCTTTTGCACTAACGCTCACAGGTTTAGCAAGGTAGTGGTTTGGCAAGGTC
CCACGAAGGTGGAGGGTTACGATGATGGAGTTGCTTTGACTGTTGTGATTTCAGGTCTTGGCCGCGATACAGGACACAATCTGTTGAAACGCCCAGAAAAGTTGAGATCA
GATCCCGACAGGAGAAACAGGAACAAATATTGCATGTTACACGGAGATCACGACCATACAACCAGAGAATGCATCCAGTTACGAGATGAGATAGAAACCCTAATCCGAGA
GGGTTACCTCAAGGAATTCGTGGGAGTGACAGAAGCAAGAGGCCACTGCCAGCAGACCAAGGCAAGGGTGGTGCCAACCCACCGCTCGAGATTCGAACCATTTTAG
Protein sequenceShow/hide protein sequence
MPPPGDDQTQKEAGPSRKKARRSSPLKKMPEGSEIAPRCIPDLDGLSWGERSNKVSSFCTNAHRFSKVVVWQGPTKVEGYDDGVALTVVISGLGRDTGHNLLKRPEKLRS
DPDRRNRNKYCMLHGDHDHTTRECIQLRDEIETLIREGYLKEFVGVTEARGHCQQTKARVVPTHRSRFEPF