; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0032008 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032008
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationchr11:22483175..22483867
RNA-Seq ExpressionLag0032008
SyntenyLag0032008
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsIPR004332 - Transposase, MuDR, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033232.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]6.3e-4050.89Show/hide
Query:  VSKVNDDFHIKLYDMFSGKINLQNALRVIALRENFQYRTVKSNNELWLVKCVVEDCNWSIRASQYGDFKSETWIV-KIISDHSCSLNVALNDHKQATSYV
        +SKV+ +F +K+ DMFS K   + +++ IALR+NFQY  VKSN E+ +++C +E+C  S+ AS         W++ +  S+H+CS++V L DH+ AT  V
Subjt:  VSKVNDDFHIKLYDMFSGKINLQNALRVIALRENFQYRTVKSNNELWLVKCVVEDCNWSIRASQYGDFKSETWIV-KIISDHSCSLNVALNDHKQATSYV

Query:  IKECIKRKMSITGSELKTPKDIVSFIRSEHGIHISYQKVWRAREAALNEIRGSPADSFSSIPTFFYILK
        IK+ IK K+ + GSEL TPKDIV +IR+EHG+ I YQ  WRAREAAL+EI GSP DS+  IP F YILK
Subjt:  IKECIKRKMSITGSELKTPKDIVSFIRSEHGIHISYQKVWRAREAALNEIRGSPADSFSSIPTFFYILK

KAA0060121.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]6.3e-4049.11Show/hide
Query:  VSKVNDDFHIKLYDMFSGKINLQNALRVIALRENFQYRTVKSNNELWLVKCVVEDCNWSIRASQYGDFKSETWIV-KIISDHSCSLNVALNDHKQATSYV
        +SKV+ +F +K+ DMFS K   +  ++ IA+R+NFQY  VKSN E+ +++C +E+C WS+RAS         W++ +  S+H+C ++V L+D++QAT  V
Subjt:  VSKVNDDFHIKLYDMFSGKINLQNALRVIALRENFQYRTVKSNNELWLVKCVVEDCNWSIRASQYGDFKSETWIV-KIISDHSCSLNVALNDHKQATSYV

Query:  IKECIKRKMSITGSELKTPKDIVSFIRSEHGIHISYQKVWRAREAALNEIRGSPADSFSSIPTFFYILK
         K+ IK K+S+ G EL T KDIV FIR+EHG+ ISYQK WRA E AL++IRGSP DS+  +P F YIL+
Subjt:  IKECIKRKMSITGSELKTPKDIVSFIRSEHGIHISYQKVWRAREAALNEIRGSPADSFSSIPTFFYILK

XP_008452162.1 PREDICTED: uncharacterized protein LOC103493267 [Cucumis melo]6.3e-4044.34Show/hide
Query:  LSDDREVSWFMNTISSVSSSSCSLVVDCSNSLSVIVDNMIVESSTPNELITPSRFFHNIDVSKVNDDFHIKLYDMFSGKINLQNALRVIALRENFQYRTV
        +++D +V W  + I+S      +L+V     LS+ + +    S          RFF N+D+SKV+ +F +K+ DMFS K   +  ++VIALR+NFQY T+
Subjt:  LSDDREVSWFMNTISSVSSSSCSLVVDCSNSLSVIVDNMIVESSTPNELITPSRFFHNIDVSKVNDDFHIKLYDMFSGKINLQNALRVIALRENFQYRTV

Query:  KSNNELWLVKCVVEDCNWSIRA--SQYGDFKSETWIVKIISDHSCSLNVALNDHKQATSYVIKECIKRKMSITGSELKTPKDIVSFIRSEHGIHISYQKV
        KSNNE+ +++CV+E+C WS+ A  S YGD +S   + +  S+ +CS++  L DH+QAT  VIK+ IK K+ + GS+L TPKDIV FI  EHG+ I YQK 
Subjt:  KSNNELWLVKCVVEDCNWSIRA--SQYGDFKSETWIVKIISDHSCSLNVALNDHKQATSYVIKECIKRKMSITGSELKTPKDIVSFIRSEHGIHISYQKV

Query:  WRAREAALNEIR
        WRAR AAL++IR
Subjt:  WRAREAALNEIR

XP_022134813.1 uncharacterized protein LOC111006994 [Momordica charantia]1.7e-5348.07Show/hide
Query:  MKLSDDREVSWFMNTISSVSSSSCSLVVDCSNSLSVIVDNMIV--ESSTPNELITPSRFFHNIDVSKVNDDFHIKLYDMFSGKINLQNALRVIALRENFQ
        MK+SDD++V W  N IS+ +   CSLVVDC N LS I+D M +   SS  N + +  +F+  IDV+ ++  FHI + D F GK NLQNALR +A+R NF 
Subjt:  MKLSDDREVSWFMNTISSVSSSSCSLVVDCSNSLSVIVDNMIV--ESSTPNELITPSRFFHNIDVSKVNDDFHIKLYDMFSGKINLQNALRVIALRENFQ

Query:  YRTVKSNNELWLVKCVVEDCNWSIRASQYGDFKSETWIV-KIISDHSCSLNVALNDHKQATSYVIKECIKRKMSITGSELKTPKDIVSFIRSEHGIHISY
        +RTVKSN E+ +V C+  +C W + AS++GD  SE WIV K + +H+CSL + LNDH+QAT  VIKE IK +++  G++L + KD +S +  E  I I+Y
Subjt:  YRTVKSNNELWLVKCVVEDCNWSIRASQYGDFKSETWIV-KIISDHSCSLNVALNDHKQATSYVIKECIKRKMSITGSELKTPKDIVSFIRSEHGIHISY

Query:  QKVWRAREAALNEIRGSPADSFSSIPTFFYILK
        QK   ARE A+ EIRGSP  S++ IP F +++K
Subjt:  QKVWRAREAALNEIRGSPADSFSSIPTFFYILK

XP_022155207.1 uncharacterized protein LOC111022347 [Momordica charantia]3.1e-5545.92Show/hide
Query:  MKLSDDREVSWFMNTISSVSSSSCSLVVDCSNSLSVIVDNMIV--ESSTPNELITPSRFFHNIDVSKVNDDFHIKLYDMFSGKINLQNALRVIALRENFQ
        MK+SDD++V W  N I +  +  CSLVVDC N LS ++D M +   SS  N + +  +F ++IDV+ +  +FHI++ D F GK NLQNALR +A+R+NFQ
Subjt:  MKLSDDREVSWFMNTISSVSSSSCSLVVDCSNSLSVIVDNMIV--ESSTPNELITPSRFFHNIDVSKVNDDFHIKLYDMFSGKINLQNALRVIALRENFQ

Query:  YRTVKSNNELWLVKCVVEDCNWSIRASQYGDFKSETWIV-KIISDHSCSLNVALNDHKQATSYVIKECIKRKMSITGSELKTPKDIVSFIRSEHGIHISY
        +RT+KSN ++ +V+  +++C W + AS++GD  SE WIV K + +H+CSL + LNDH+QAT  VIKE IK + ++ G++L + KD++S +R   GI I+Y
Subjt:  YRTVKSNNELWLVKCVVEDCNWSIRASQYGDFKSETWIV-KIISDHSCSLNVALNDHKQATSYVIKECIKRKMSITGSELKTPKDIVSFIRSEHGIHISY

Query:  QKVWRAREAALNEIRGSPADSFSSIPTFFYILK
        QK WR R++A+ EI+GSP +S++ +P+F +++K
Subjt:  QKVWRAREAALNEIRGSPADSFSSIPTFFYILK

TrEMBL top hitse value%identityAlignment
A0A1S3BT85 uncharacterized protein LOC1034932673.0e-4044.34Show/hide
Query:  LSDDREVSWFMNTISSVSSSSCSLVVDCSNSLSVIVDNMIVESSTPNELITPSRFFHNIDVSKVNDDFHIKLYDMFSGKINLQNALRVIALRENFQYRTV
        +++D +V W  + I+S      +L+V     LS+ + +    S          RFF N+D+SKV+ +F +K+ DMFS K   +  ++VIALR+NFQY T+
Subjt:  LSDDREVSWFMNTISSVSSSSCSLVVDCSNSLSVIVDNMIVESSTPNELITPSRFFHNIDVSKVNDDFHIKLYDMFSGKINLQNALRVIALRENFQYRTV

Query:  KSNNELWLVKCVVEDCNWSIRA--SQYGDFKSETWIVKIISDHSCSLNVALNDHKQATSYVIKECIKRKMSITGSELKTPKDIVSFIRSEHGIHISYQKV
        KSNNE+ +++CV+E+C WS+ A  S YGD +S   + +  S+ +CS++  L DH+QAT  VIK+ IK K+ + GS+L TPKDIV FI  EHG+ I YQK 
Subjt:  KSNNELWLVKCVVEDCNWSIRA--SQYGDFKSETWIVKIISDHSCSLNVALNDHKQATSYVIKECIKRKMSITGSELKTPKDIVSFIRSEHGIHISYQKV

Query:  WRAREAALNEIR
        WRAR AAL++IR
Subjt:  WRAREAALNEIR

A0A5A7V2Y2 Protein FAR-RED ELONGATED HYPOCOTYL 3-like3.0e-4049.11Show/hide
Query:  VSKVNDDFHIKLYDMFSGKINLQNALRVIALRENFQYRTVKSNNELWLVKCVVEDCNWSIRASQYGDFKSETWIV-KIISDHSCSLNVALNDHKQATSYV
        +SKV+ +F +K+ DMFS K   +  ++ IA+R+NFQY  VKSN E+ +++C +E+C WS+RAS         W++ +  S+H+C ++V L+D++QAT  V
Subjt:  VSKVNDDFHIKLYDMFSGKINLQNALRVIALRENFQYRTVKSNNELWLVKCVVEDCNWSIRASQYGDFKSETWIV-KIISDHSCSLNVALNDHKQATSYV

Query:  IKECIKRKMSITGSELKTPKDIVSFIRSEHGIHISYQKVWRAREAALNEIRGSPADSFSSIPTFFYILK
         K+ IK K+S+ G EL T KDIV FIR+EHG+ ISYQK WRA E AL++IRGSP DS+  +P F YIL+
Subjt:  IKECIKRKMSITGSELKTPKDIVSFIRSEHGIHISYQKVWRAREAALNEIRGSPADSFSSIPTFFYILK

A0A5D3BGB6 Protein FAR-RED ELONGATED HYPOCOTYL 3-like3.0e-4050.89Show/hide
Query:  VSKVNDDFHIKLYDMFSGKINLQNALRVIALRENFQYRTVKSNNELWLVKCVVEDCNWSIRASQYGDFKSETWIV-KIISDHSCSLNVALNDHKQATSYV
        +SKV+ +F +K+ DMFS K   + +++ IALR+NFQY  VKSN E+ +++C +E+C  S+ AS         W++ +  S+H+CS++V L DH+ AT  V
Subjt:  VSKVNDDFHIKLYDMFSGKINLQNALRVIALRENFQYRTVKSNNELWLVKCVVEDCNWSIRASQYGDFKSETWIV-KIISDHSCSLNVALNDHKQATSYV

Query:  IKECIKRKMSITGSELKTPKDIVSFIRSEHGIHISYQKVWRAREAALNEIRGSPADSFSSIPTFFYILK
        IK+ IK K+ + GSEL TPKDIV +IR+EHG+ I YQ  WRAREAAL+EI GSP DS+  IP F YILK
Subjt:  IKECIKRKMSITGSELKTPKDIVSFIRSEHGIHISYQKVWRAREAALNEIRGSPADSFSSIPTFFYILK

A0A6J1C328 uncharacterized protein LOC1110069948.2e-5448.07Show/hide
Query:  MKLSDDREVSWFMNTISSVSSSSCSLVVDCSNSLSVIVDNMIV--ESSTPNELITPSRFFHNIDVSKVNDDFHIKLYDMFSGKINLQNALRVIALRENFQ
        MK+SDD++V W  N IS+ +   CSLVVDC N LS I+D M +   SS  N + +  +F+  IDV+ ++  FHI + D F GK NLQNALR +A+R NF 
Subjt:  MKLSDDREVSWFMNTISSVSSSSCSLVVDCSNSLSVIVDNMIV--ESSTPNELITPSRFFHNIDVSKVNDDFHIKLYDMFSGKINLQNALRVIALRENFQ

Query:  YRTVKSNNELWLVKCVVEDCNWSIRASQYGDFKSETWIV-KIISDHSCSLNVALNDHKQATSYVIKECIKRKMSITGSELKTPKDIVSFIRSEHGIHISY
        +RTVKSN E+ +V C+  +C W + AS++GD  SE WIV K + +H+CSL + LNDH+QAT  VIKE IK +++  G++L + KD +S +  E  I I+Y
Subjt:  YRTVKSNNELWLVKCVVEDCNWSIRASQYGDFKSETWIV-KIISDHSCSLNVALNDHKQATSYVIKECIKRKMSITGSELKTPKDIVSFIRSEHGIHISY

Query:  QKVWRAREAALNEIRGSPADSFSSIPTFFYILK
        QK   ARE A+ EIRGSP  S++ IP F +++K
Subjt:  QKVWRAREAALNEIRGSPADSFSSIPTFFYILK

A0A6J1DNQ8 uncharacterized protein LOC1110223471.5e-5545.92Show/hide
Query:  MKLSDDREVSWFMNTISSVSSSSCSLVVDCSNSLSVIVDNMIV--ESSTPNELITPSRFFHNIDVSKVNDDFHIKLYDMFSGKINLQNALRVIALRENFQ
        MK+SDD++V W  N I +  +  CSLVVDC N LS ++D M +   SS  N + +  +F ++IDV+ +  +FHI++ D F GK NLQNALR +A+R+NFQ
Subjt:  MKLSDDREVSWFMNTISSVSSSSCSLVVDCSNSLSVIVDNMIV--ESSTPNELITPSRFFHNIDVSKVNDDFHIKLYDMFSGKINLQNALRVIALRENFQ

Query:  YRTVKSNNELWLVKCVVEDCNWSIRASQYGDFKSETWIV-KIISDHSCSLNVALNDHKQATSYVIKECIKRKMSITGSELKTPKDIVSFIRSEHGIHISY
        +RT+KSN ++ +V+  +++C W + AS++GD  SE WIV K + +H+CSL + LNDH+QAT  VIKE IK + ++ G++L + KD++S +R   GI I+Y
Subjt:  YRTVKSNNELWLVKCVVEDCNWSIRASQYGDFKSETWIV-KIISDHSCSLNVALNDHKQATSYVIKECIKRKMSITGSELKTPKDIVSFIRSEHGIHISY

Query:  QKVWRAREAALNEIRGSPADSFSSIPTFFYILK
        QK WR R++A+ EI+GSP +S++ +P+F +++K
Subjt:  QKVWRAREAALNEIRGSPADSFSSIPTFFYILK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTATCAGACGACAGGGAAGTTAGTTGGTTTATGAACACTATTTCTAGTGTTTCATCAAGTAGTTGTTCACTAGTAGTCGATTGCAGTAATAGCCTTTCAGTTAT
AGTGGACAATATGATTGTTGAATCTTCCACCCCGAATGAACTGATTACTCCTAGTAGATTTTTTCACAACATTGATGTGTCAAAAGTTAATGATGATTTTCACATTAAAT
TGTATGACATGTTTAGTGGCAAGATTAATTTACAGAATGCTTTGCGTGTTATTGCCTTGAGAGAAAATTTTCAATATAGGACTGTAAAATCCAACAATGAGTTGTGGTTA
GTTAAATGTGTTGTTGAGGATTGCAATTGGTCTATTCGTGCCAGTCAATATGGTGATTTTAAAAGTGAAACATGGATTGTGAAGATCATTAGTGATCATTCGTGCTCTCT
TAATGTCGCATTGAATGATCATAAACAAGCAACGTCGTATGTCATTAAAGAGTGTATTAAGAGGAAGATGAGCATTACTGGAAGCGAATTGAAAACACCTAAAGATATTG
TTTCCTTCATTCGTTCTGAACATGGCATCCACATAAGTTATCAAAAAGTGTGGCGTGCTAGAGAAGCGGCTCTAAATGAAATCCGAGGCTCACCTGCAGACTCGTTCTCT
TCAATCCCAACATTCTTTTACATTCTGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAATTATCAGACGACAGGGAAGTTAGTTGGTTTATGAACACTATTTCTAGTGTTTCATCAAGTAGTTGTTCACTAGTAGTCGATTGCAGTAATAGCCTTTCAGTTAT
AGTGGACAATATGATTGTTGAATCTTCCACCCCGAATGAACTGATTACTCCTAGTAGATTTTTTCACAACATTGATGTGTCAAAAGTTAATGATGATTTTCACATTAAAT
TGTATGACATGTTTAGTGGCAAGATTAATTTACAGAATGCTTTGCGTGTTATTGCCTTGAGAGAAAATTTTCAATATAGGACTGTAAAATCCAACAATGAGTTGTGGTTA
GTTAAATGTGTTGTTGAGGATTGCAATTGGTCTATTCGTGCCAGTCAATATGGTGATTTTAAAAGTGAAACATGGATTGTGAAGATCATTAGTGATCATTCGTGCTCTCT
TAATGTCGCATTGAATGATCATAAACAAGCAACGTCGTATGTCATTAAAGAGTGTATTAAGAGGAAGATGAGCATTACTGGAAGCGAATTGAAAACACCTAAAGATATTG
TTTCCTTCATTCGTTCTGAACATGGCATCCACATAAGTTATCAAAAAGTGTGGCGTGCTAGAGAAGCGGCTCTAAATGAAATCCGAGGCTCACCTGCAGACTCGTTCTCT
TCAATCCCAACATTCTTTTACATTCTGAAGTAA
Protein sequenceShow/hide protein sequence
MKLSDDREVSWFMNTISSVSSSSCSLVVDCSNSLSVIVDNMIVESSTPNELITPSRFFHNIDVSKVNDDFHIKLYDMFSGKINLQNALRVIALRENFQYRTVKSNNELWL
VKCVVEDCNWSIRASQYGDFKSETWIVKIISDHSCSLNVALNDHKQATSYVIKECIKRKMSITGSELKTPKDIVSFIRSEHGIHISYQKVWRAREAALNEIRGSPADSFS
SIPTFFYILK