; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0032009 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032009
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionChitinase
Genome locationchr11:22548376..22550205
RNA-Seq ExpressionLag0032009
SyntenyLag0032009
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RHY92641.1 hypothetical protein DYB35_010927 [Aphanomyces astaci]1.7e-0438.57Show/hide
Query:  PPSSKVFTRFGEVPSSKSEVPSSKFEGSHALRCSFFSL-SSKVLTRFD--AVPSSQIRRFSLASLQFLPPNSKVSKVLTRCDSLQFLPPSSKVLMRFAAQ
        PP SK+       PSSK  +PSSKF     L  S F L SSK L       +PSS    F L S + LPP+SK            FL PSS  L+  +++
Subjt:  PPSSKVFTRFGEVPSSKSEVPSSKFEGSHALRCSFFSL-SSKVLTRFD--AVPSSQIRRFSLASLQFLPPNSKVSKVLTRCDSLQFLPPSSKVLMRFAAQ

Query:  FLPPSSKVLMRFVATFLQVRRFSHALLQLLPPSSKALLSVATF-LQFRRFSHALLQFLPPSSKVPSRASLAPSPSSKALLSTAPSPSSKALLSAAPSPSS
         LPPSSK L+  +   L    F     +LLPPSSK LL +  F L   +F   L +FL PSSK    +S    PSSK L      PSSK LL   P P +
Subjt:  FLPPSSKVLMRFVATFLQVRRFSHALLQLLPPSSKALLSVATF-LQFRRFSHALLQFLPPSSKVPSRASLAPSPSSKALLSTAPSPSSKALLSAAPSPSS

Query:  KALLSTPPFEGSPLRSASLKASL
        +    +PP   + LR     AS+
Subjt:  KALLSTPPFEGSPLRSASLKASL
SSD60786.1 uncharacterized protein SCODWIG_02547 [Saccharomycodes ludwigii]7.1e-0630.2Show/hide
Query:  ASLKFGVSLTLSSCIPSLQVRRFSHVSLQFLFSKYEGSYIVAMQFLPPSSKVL---TLLRRSSFSPSTKVLSSKFEGSHALRHSSFLQVRRFSRASRFTR
        +S+    ++  SS +PS  V  +S V    L+S    S  +      PSS  +   + +  SS   S+ VLSS    S A+  SS L       +S    
Subjt:  ASLKFGVSLTLSSCIPSLQVRRFSHVSLQFLFSKYEGSYIVAMQFLPPSSKVL---TLLRRSSFSPSTKVLSSKFEGSHALRHSSFLQVRRFSRASRFTR

Query:  APQFLP----PSSKVLTRFATVPSLQVRRFSRRFAAVPSSKFEGSHVLRCSSFSPRSKVLTRCVAVLSPQVRRFTHFAAVPSPKFEGSHAFRYSSFPPSS
        +         PSS VL   + VPS  V   S   + +PSS      V+  SS +P S  +     VLS  V      +A+PS     S +   SS  PSS
Subjt:  APQFLP----PSSKVLTRFATVPSLQVRRFSRRFAAVPSSKFEGSHVLRCSSFSPRSKVLTRCVAVLSPQVRRFTHFAAVPSPKFEGSHAFRYSSFPPSS

Query:  KVFTRFGEVPS----SKSEVPSSKFEGSHALRCSFFSL-----SSKVLTRFDAVPSSQIRRFS-LASLQFLPPNSKVSK---VLTRCDSLQFLPPSSKVL
         V      VPS    S S VPSS    S  +  S   L     SS VL     VPSS +   S + S   +P +S +S     L+      F+PPSS  L
Subjt:  KVFTRFGEVPS----SKSEVPSSKFEGSHALRCSFFSL-----SSKVLTRFDAVPSSQIRRFS-LASLQFLPPNSKVSK---VLTRCDSLQFLPPSSKVL

Query:  MRF---AAQFLPPSSKVLMRFVATFLQVRRFSHALLQLLPPSSKALLSVATFLQFRRFSHALLQFLPPSSKVPSRASLAPS----PSSKALLSTAPSPSS
          F   ++  +  +S VL   VA        S  ++    P + A+ S +T       S  L   +P SS +PS  S  PS    PSS  + S++ SPSS
Subjt:  MRF---AAQFLPPSSKVLMRFVATFLQVRRFSHALLQLLPPSSKALLSVATFLQFRRFSHALLQFLPPSSKVPSRASLAPS----PSSKALLSTAPSPSS

Query:  KALLSAAPSPSSKALLSTPPFEGSPLRSASLKASLMTTPAGYSDHPI
          +LS++ +PSS  +LS+         S  L +S+  TPA  S  P+
Subjt:  KALLSAAPSPSSKALLSTPPFEGSPLRSASLKASLMTTPAGYSDHPI
TrEMBL top hitse value%identityAlignment
A0A376B7X3 Chitinase3.4e-0630.2Show/hide
Query:  ASLKFGVSLTLSSCIPSLQVRRFSHVSLQFLFSKYEGSYIVAMQFLPPSSKVL---TLLRRSSFSPSTKVLSSKFEGSHALRHSSFLQVRRFSRASRFTR
        +S+    ++  SS +PS  V  +S V    L+S    S  +      PSS  +   + +  SS   S+ VLSS    S A+  SS L       +S    
Subjt:  ASLKFGVSLTLSSCIPSLQVRRFSHVSLQFLFSKYEGSYIVAMQFLPPSSKVL---TLLRRSSFSPSTKVLSSKFEGSHALRHSSFLQVRRFSRASRFTR

Query:  APQFLP----PSSKVLTRFATVPSLQVRRFSRRFAAVPSSKFEGSHVLRCSSFSPRSKVLTRCVAVLSPQVRRFTHFAAVPSPKFEGSHAFRYSSFPPSS
        +         PSS VL   + VPS  V   S   + +PSS      V+  SS +P S  +     VLS  V      +A+PS     S +   SS  PSS
Subjt:  APQFLP----PSSKVLTRFATVPSLQVRRFSRRFAAVPSSKFEGSHVLRCSSFSPRSKVLTRCVAVLSPQVRRFTHFAAVPSPKFEGSHAFRYSSFPPSS

Query:  KVFTRFGEVPS----SKSEVPSSKFEGSHALRCSFFSL-----SSKVLTRFDAVPSSQIRRFS-LASLQFLPPNSKVSK---VLTRCDSLQFLPPSSKVL
         V      VPS    S S VPSS    S  +  S   L     SS VL     VPSS +   S + S   +P +S +S     L+      F+PPSS  L
Subjt:  KVFTRFGEVPS----SKSEVPSSKFEGSHALRCSFFSL-----SSKVLTRFDAVPSSQIRRFS-LASLQFLPPNSKVSK---VLTRCDSLQFLPPSSKVL

Query:  MRF---AAQFLPPSSKVLMRFVATFLQVRRFSHALLQLLPPSSKALLSVATFLQFRRFSHALLQFLPPSSKVPSRASLAPS----PSSKALLSTAPSPSS
          F   ++  +  +S VL   VA        S  ++    P + A+ S +T       S  L   +P SS +PS  S  PS    PSS  + S++ SPSS
Subjt:  MRF---AAQFLPPSSKVLMRFVATFLQVRRFSHALLQLLPPSSKALLSVATFLQFRRFSHALLQFLPPSSKVPSRASLAPS----PSSKALLSTAPSPSS

Query:  KALLSAAPSPSSKALLSTPPFEGSPLRSASLKASLMTTPAGYSDHPI
          +LS++ +PSS  +LS+         S  L +S+  TPA  S  P+
Subjt:  KALLSAAPSPSSKALLSTPPFEGSPLRSASLKASLMTTPAGYSDHPI
A0A3R6WL53 Uncharacterized protein8.5e-0538.57Show/hide
Query:  PPSSKVFTRFGEVPSSKSEVPSSKFEGSHALRCSFFSL-SSKVLTRFD--AVPSSQIRRFSLASLQFLPPNSKVSKVLTRCDSLQFLPPSSKVLMRFAAQ
        PP SK+       PSSK  +PSSKF     L  S F L SSK L       +PSS    F L S + LPP+SK            FL PSS  L+  +++
Subjt:  PPSSKVFTRFGEVPSSKSEVPSSKFEGSHALRCSFFSL-SSKVLTRFD--AVPSSQIRRFSLASLQFLPPNSKVSKVLTRCDSLQFLPPSSKVLMRFAAQ

Query:  FLPPSSKVLMRFVATFLQVRRFSHALLQLLPPSSKALLSVATF-LQFRRFSHALLQFLPPSSKVPSRASLAPSPSSKALLSTAPSPSSKALLSAAPSPSS
         LPPSSK L+  +   L    F     +LLPPSSK LL +  F L   +F   L +FL PSSK    +S    PSSK L      PSSK LL   P P +
Subjt:  FLPPSSKVLMRFVATFLQVRRFSHALLQLLPPSSKALLSVATF-LQFRRFSHALLQFLPPSSKVPSRASLAPSPSSKALLSTAPSPSSKALLSAAPSPSS

Query:  KALLSTPPFEGSPLRSASLKASL
        +    +PP   + LR     AS+
Subjt:  KALLSTPPFEGSPLRSASLKASL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATAAAAGAAGATTTCATTCTCTCCAAATTCAATGTCTCGCTAGCCTCAAGTTCGGTGTTTCACTCACCCTAAGTTCGTGCATTCCTTCTCTTCAAGTTCGAAGGTT
CTCACATGTTTCGCTGCAGTTCCTTTTCTCCAAGTACGAAGGCTCTTACATTGTTGCGATGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTTGCTTCGCCGTAGTT
CCTTCTCTCCAAGTACGAAGGTTCTCTCCTCCAAGTTCGAAGGTTCACACGCGCTTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCATCAAGGTTCACA
CGCGCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTACAGTTCCTTCCCTCCAAGTTCGGAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTC
CAAGTTCGAAGGTTCTCACGTACTTCGCTGCAGTTCCTTCTCTCCAAGGTCGAAGGTTCTCACGCGCTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGCACT
TCGCTGCAGTTCCTTCTCCCAAATTCGAAGGTTCTCACGCATTTCGCTACAGTTCATTTCCTCCAAGTTCAAAGGTTTTCACGCGCTTCGGTGAAGTTCCTTCCTCCAAG
TCTGAAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTTCTTCTCCCTAAGTTCGAAGGTTCTCACGCGCTTCGATGCAGTTCCTTCCTCCCAAAT
TCGAAGGTTCTCACTCGCTTCGCTGCAGTTCCTTCCTCCAAATTCGAAGGTTTCGAAGGTTCTCACGCGCTGTGATTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTC
TCATGCGCTTCGCTGCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGTTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTT
CCTCCAAGTTCGAAGGCGCTTCTCTCCGTTGCTACCTTCCTCCAATTTCGAAGGTTCTCTCACGCGCTGCTACAGTTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGC
TTCGCTCGCTCCTTCTCCAAGTTCGAAGGCACTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCACTTCTCTCCGCTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCT
CCACCCCTCCTTTTGAAGGTTCGCCACTGAGGAGTGCATCACTGAAGGCGAGTCTGATGACTACCCCTGCAGGTTATTCAGATCACCCAATAAAATGGGGACTGGATCTA
GCAGGAGTGCATGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGGTCTAGCAGGAGTGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGAATAAAAGAAGATTTCATTCTCTCCAAATTCAATGTCTCGCTAGCCTCAAGTTCGGTGTTTCACTCACCCTAAGTTCGTGCATTCCTTCTCTTCAAGTTCGAAGGTT
CTCACATGTTTCGCTGCAGTTCCTTTTCTCCAAGTACGAAGGCTCTTACATTGTTGCGATGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTTGCTTCGCCGTAGTT
CCTTCTCTCCAAGTACGAAGGTTCTCTCCTCCAAGTTCGAAGGTTCACACGCGCTTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCATCAAGGTTCACA
CGCGCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTACAGTTCCTTCCCTCCAAGTTCGGAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTC
CAAGTTCGAAGGTTCTCACGTACTTCGCTGCAGTTCCTTCTCTCCAAGGTCGAAGGTTCTCACGCGCTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGCACT
TCGCTGCAGTTCCTTCTCCCAAATTCGAAGGTTCTCACGCATTTCGCTACAGTTCATTTCCTCCAAGTTCAAAGGTTTTCACGCGCTTCGGTGAAGTTCCTTCCTCCAAG
TCTGAAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTTCTTCTCCCTAAGTTCGAAGGTTCTCACGCGCTTCGATGCAGTTCCTTCCTCCCAAAT
TCGAAGGTTCTCACTCGCTTCGCTGCAGTTCCTTCCTCCAAATTCGAAGGTTTCGAAGGTTCTCACGCGCTGTGATTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTC
TCATGCGCTTCGCTGCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGTTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTT
CCTCCAAGTTCGAAGGCGCTTCTCTCCGTTGCTACCTTCCTCCAATTTCGAAGGTTCTCTCACGCGCTGCTACAGTTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGC
TTCGCTCGCTCCTTCTCCAAGTTCGAAGGCACTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCACTTCTCTCCGCTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCT
CCACCCCTCCTTTTGAAGGTTCGCCACTGAGGAGTGCATCACTGAAGGCGAGTCTGATGACTACCCCTGCAGGTTATTCAGATCACCCAATAAAATGGGGACTGGATCTA
GCAGGAGTGCATGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGGTCTAGCAGGAGTGCATGA
Protein sequenceShow/hide protein sequence
MNKRRFHSLQIQCLASLKFGVSLTLSSCIPSLQVRRFSHVSLQFLFSKYEGSYIVAMQFLPPSSKVLTLLRRSSFSPSTKVLSSKFEGSHALRHSSFLQVRRFSRASRFT
RAPQFLPPSSKVLTRFATVPSLQVRRFSRRFAAVPSSKFEGSHVLRCSSFSPRSKVLTRCVAVLSPQVRRFTHFAAVPSPKFEGSHAFRYSSFPPSSKVFTRFGEVPSSK
SEVPSSKFEGSHALRCSFFSLSSKVLTRFDAVPSSQIRRFSLASLQFLPPNSKVSKVLTRCDSLQFLPPSSKVLMRFAAQFLPPSSKVLMRFVATFLQVRRFSHALLQLL
PPSSKALLSVATFLQFRRFSHALLQFLPPSSKVPSRASLAPSPSSKALLSTAPSPSSKALLSAAPSPSSKALLSTPPFEGSPLRSASLKASLMTTPAGYSDHPIKWGLDL
AGVHEGESGDYPCRLLRSPNKMGTGSSRSA