| GenBank top hits | e value | %identity | Alignment |
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| RVW24904.1 putative ribonuclease H protein [Vitis vinifera] | 2.1e-44 | 33.15 | Show/hide |
Query: DRWINGGDFNVTRWSWVKSHGSAHHKKCNLREQVEDLTAQDHIQWHQHCKLKWLKEDDENTKFFHRILVARERKHSITAVLSREGVNIVTANDIEKEFID
DR G + V WV S H + + + I W Q ++KW+KE D N+KF+H++ R + I + + G+ + A I +E +
Subjt: DRWINGGDFNVTRWSWVKSHGSAHHKKCNLREQVEDLTAQDHIQWHQHCKLKWLKEDDENTKFFHRILVARERKHSITAVLSREGVNIVTANDIEKEFID
Query: FYKKLFTKDNHSRFLPTIVDWSPISENQAI--------GLEAVFFLE-EKVFQAM--NSLGSMVLYAKGFGLIWRKWIRGCISSVNHSIIINEKPRGKII
+++KL+T + +DWSPISE + G VF ++ EK + + + GS V +GF WRKW+ GC+SSV+++I++N +G +
Subjt: FYKKLFTKDNHSRFLPTIVDWSPISENQAI--------GLEAVFFLE-EKVFQAM--NSLGSMVLYAKGFGLIWRKWIRGCISSVNHSIIINEKPRGKII
Query: LSRGIRQGDTLLSSTFDLEAMIKLFEVIR---------IFELASDLEEMAAKFGCKCGNWPSTYLGLPLGGNSKNSLFWQPVYEKIQHKLHSWKYAFISK
SRG+RQGD L F L A + L ++R L+ + A F + T G PLGGN K FW PV E+I +L W+ A++S
Subjt: LSRGIRQGDTLLSSTFDLEAMIKLFEVIR---------IFELASDLEEMAAKFGCKCGNWPSTYLGLPLGGNSKNSLFWQPVYEKIQHKLHSWKYAFISK
Query: GGRHTLIQATLSSMPTYYLSLFKIPSKVATSLDKLVRDFFWEGSKGDGGMYNVNWE
GGR TLIQ+ L+ +P Y+LSLFK+P+ VA +++L RDF W G + V W+
Subjt: GGRHTLIQATLSSMPTYYLSLFKIPSKVATSLDKLVRDFFWEGSKGDGGMYNVNWE
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| RVW53981.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera] | 1.7e-46 | 28.8 | Show/hide |
Query: REQVEDLTAQDHIQWHQHCKLKWLKEDDENTKFFHRILVARERKHSITAVLSREGVNIVTANDIEKEFIDFYKKLFTKDNHSRFLPTIVDWSPISENQAI
R+++EDL ++ +QW Q ++KW+KE D N+KFFHR+ R + I +++S G + I +E ++F+ L++K + +DW+PISE AI
Subjt: REQVEDLTAQDHIQWHQHCKLKWLKEDDENTKFFHRILVARERKHSITAVLSREGVNIVTANDIEKEFIDFYKKLFTKDNHSRFLPTIVDWSPISENQAI
Query: GLEAVFFLEEKVFQAMNSL------GSM---------------------------------------------------VLYAKGFGLIWRKWIRGCISS
L+ F EE + + + GS VL KGF WR W+RGC+SS
Subjt: GLEAVFFLEEKVFQAMNSL------GSM---------------------------------------------------VLYAKGFGLIWRKWIRGCISS
Query: VNHSIIINEKPRGKIILSRGIRQGDTLLSSTFDLEA------MIKLFEV--------------IRIFELASD----------------------------
+ +I++N + + SRG+RQGD L F L A MI+ E + + + A D
Subjt: VNHSIIINEKPRGKIILSRGIRQGDTLLSSTFDLEA------MIKLFEV--------------IRIFELASD----------------------------
Query: ------------------LEEMAAKFGCKCGNWPSTYLGLPLGGNSKNSLFWQPVYEKIQHKLHSWKYAFISKGGRHTLIQATLSSMPTYYLSLFKIPSK
L +A C+ WP +YLGLPLGGN K FW PV E+I +L WK A+ S GGR TLIQ+ LS +P+Y+LSLFKIP
Subjt: ------------------LEEMAAKFGCKCGNWPSTYLGLPLGGNSKNSLFWQPVYEKIQHKLHSWKYAFISKGGRHTLIQATLSSMPTYYLSLFKIPSK
Query: VATSLDKLVRDFFWEGSKGDGGMYNVNWERTQLP
+ + ++K+ RDF W G+ + + WE P
Subjt: VATSLDKLVRDFFWEGSKGDGGMYNVNWERTQLP
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| RVW96870.1 putative ribonuclease H protein [Vitis vinifera] | 2.9e-46 | 29.63 | Show/hide |
Query: REQVEDLTAQDHIQWHQHCKLKWLKEDDENTKFFHRILVARERKHSITAVLSREGVNIVTANDIEKEFIDFYKKLFTKDNHSRFLPTIVDWSPISENQAI
R+++EDL ++ +QW Q ++KW+KE D N+KFFHR+ R + I +++S G + I +E ++F+ L++K + +DW+ +
Subjt: REQVEDLTAQDHIQWHQHCKLKWLKEDDENTKFFHRILVARERKHSITAVLSREGVNIVTANDIEKEFIDFYKKLFTKDNHSRFLPTIVDWSPISENQAI
Query: GLEAVF--------FLEEKVFQAMNSL--GSMVLYA------------------KGFGLIWRKWIRGCISSVNHSIIINEKPRGKIILSRGIRQGDTLLS
G F L E +F + + G +L A +GF WR W+RGC+SS + +I++N +G + SRG+RQGD L
Subjt: GLEAVF--------FLEEKVFQAMNSL--GSMVLYA------------------KGFGLIWRKWIRGCISSVNHSIIINEKPRGKIILSRGIRQGDTLLS
Query: STFDLEA------MIKLFEV--------------IRIFELASD----------------------------------------------LEEMAAKFGCK
F L A MI+ E + + + A D L +A C+
Subjt: STFDLEA------MIKLFEV--------------IRIFELASD----------------------------------------------LEEMAAKFGCK
Query: CGNWPSTYLGLPLGGNSKNSLFWQPVYEKIQHKLHSWKYAFISKGGRHTLIQATLSSMPTYYLSLFKIPSKVATSLDKLVRDFFWEGSKGDGGMYNVNWE
WP +YLGLPLGGN K FW PV E+I +L WK A++S GGR TLIQ+ LS +P+Y+LSLFKIP +A+ ++K+ RDF W G+ + + WE
Subjt: CGNWPSTYLGLPLGGNSKNSLFWQPVYEKIQHKLHSWKYAFISKGGRHTLIQATLSSMPTYYLSLFKIPSKVATSLDKLVRDFFWEGSKGDGGMYNVNWE
Query: RTQLP
P
Subjt: RTQLP
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| RVX16773.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera] | 3.2e-45 | 27.78 | Show/hide |
Query: REQVEDLTAQDHIQWHQHCKLKWLKEDDENTKFFHRILVARERKHSITAVLSREGVNIVTANDIEKEFIDFYKKLFTKDNHSRFLPTIVDWSPISENQAI
R+++EDL ++ +QW Q ++KW+KE+D N+KFFHR+ R + I +++S G + I +E ++F++ L++K + +DW+PISE AI
Subjt: REQVEDLTAQDHIQWHQHCKLKWLKEDDENTKFFHRILVARERKHSITAVLSREGVNIVTANDIEKEFIDFYKKLFTKDNHSRFLPTIVDWSPISENQAI
Query: GLEAVFFLEE---KVFQ-------------------------------------------AMNSLGSM--------------------------------
L+ F EE VFQ S G+
Subjt: GLEAVFFLEE---KVFQ-------------------------------------------AMNSLGSM--------------------------------
Query: -------------VLYAKGFGLIWRKWIRGCISSVNHSIIINEKPRGKIILSRGIRQGDTLLSSTFDLEA------MIKLFEV--------------IRI
VL KGF WR W+RGC+SS + +I++N +G + SRG+RQGD L F L A MI+ E + +
Subjt: -------------VLYAKGFGLIWRKWIRGCISSVNHSIIINEKPRGKIILSRGIRQGDTLLSSTFDLEA------MIKLFEV--------------IRI
Query: FELASD----------------------------------------------LEEMAAKFGCKCGNWPSTYLGLPLGGNSKNSLFWQPVYEKIQHKLHSW
+ A D L +A C+ WP +YLGLPLGGN K FW PV E+I +L W
Subjt: FELASD----------------------------------------------LEEMAAKFGCKCGNWPSTYLGLPLGGNSKNSLFWQPVYEKIQHKLHSW
Query: KYAFISKGGRHTLIQATLSSMPTYYLSLFKIPSKVATSLDKLVRDFFWEGSKGDGGMYNVNWERTQLP
K A++S GGR TLIQ+ LS +P+Y+LSLFKIP +A+ ++K+ RDF W G+ + + WE P
Subjt: KYAFISKGGRHTLIQATLSSMPTYYLSLFKIPSKVATSLDKLVRDFFWEGSKGDGGMYNVNWERTQLP
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| TYJ99315.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 2.1e-44 | 29.57 | Show/hide |
Query: HKKCNLREQVEDLTAQDHIQWHQHCKLKWLKEDDENTKFFHRILVARERKHSITAVLSREGVNIVTANDIEKEFIDFYKKLFTKDNHS--RFLPTIVDWS
+++ L+ + +L+ ++ W+Q K WL+E DEN+ FFHRI +R+++ I + EG T N I FI F+ +++ S F+ + DW+
Subjt: HKKCNLREQVEDLTAQDHIQWHQHCKLKWLKEDDENTKFFHRILVARERKHSITAVLSREGVNIVTANDIEKEFIDFYKKLFTKDNHS--RFLPTIVDWS
Query: PISE-----------------------------------------------------------------------NQAIGLEAV-----FFLE---EKVF
PI+ N+A+ V F L+ EK F
Subjt: PISE-----------------------------------------------------------------------NQAIGLEAV-----FFLE---EKVF
Query: QAMN-SLGSMVLYAKGFGLIWRKWIRGCISSVNHSIIINEKPRGKIILSRGIRQGDTLLSSTF-------------------------------------
+N VL K F WRKWIRGCIS+V +S+IIN +P+G+I +RG+RQGD L F
Subjt: QAMN-SLGSMVLYAKGFGLIWRKWIRGCISSVNHSIIINEKPRGKIILSRGIRQGDTLLSSTF-------------------------------------
Query: --------DLEAMIK-LFEVIRIFELASDL-------------------EEMAAKFGCKCGNWPSTYLGLPLGGNSKNSLFWQPVYEKIQHKLHSWKYAF
D + +K L + +FE AS L +E A+ +G C + P +YLG+PLGGN K++LFW+ V +KIQ KL++WKYA
Subjt: --------DLEAMIK-LFEVIRIFELASDL-------------------EEMAAKFGCKCGNWPSTYLGLPLGGNSKNSLFWQPVYEKIQHKLHSWKYAF
Query: ISKGGRHTLIQATLSSMPTYYLSLFKIPSKVATSLDKLVRDFFWEGSKGDGGMYNVNWER
ISKGGR TLI++TLSS+P Y LS+F+ PS +++KL R F W+G+ G G + +NW +
Subjt: ISKGGRHTLIQATLSSMPTYYLSLFKIPSKVATSLDKLVRDFFWEGSKGDGGMYNVNWER
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A438CNX4 Putative ribonuclease H protein | 1.0e-44 | 33.15 | Show/hide |
Query: DRWINGGDFNVTRWSWVKSHGSAHHKKCNLREQVEDLTAQDHIQWHQHCKLKWLKEDDENTKFFHRILVARERKHSITAVLSREGVNIVTANDIEKEFID
DR G + V WV S H + + + I W Q ++KW+KE D N+KF+H++ R + I + + G+ + A I +E +
Subjt: DRWINGGDFNVTRWSWVKSHGSAHHKKCNLREQVEDLTAQDHIQWHQHCKLKWLKEDDENTKFFHRILVARERKHSITAVLSREGVNIVTANDIEKEFID
Query: FYKKLFTKDNHSRFLPTIVDWSPISENQAI--------GLEAVFFLE-EKVFQAM--NSLGSMVLYAKGFGLIWRKWIRGCISSVNHSIIINEKPRGKII
+++KL+T + +DWSPISE + G VF ++ EK + + + GS V +GF WRKW+ GC+SSV+++I++N +G +
Subjt: FYKKLFTKDNHSRFLPTIVDWSPISENQAI--------GLEAVFFLE-EKVFQAM--NSLGSMVLYAKGFGLIWRKWIRGCISSVNHSIIINEKPRGKII
Query: LSRGIRQGDTLLSSTFDLEAMIKLFEVIR---------IFELASDLEEMAAKFGCKCGNWPSTYLGLPLGGNSKNSLFWQPVYEKIQHKLHSWKYAFISK
SRG+RQGD L F L A + L ++R L+ + A F + T G PLGGN K FW PV E+I +L W+ A++S
Subjt: LSRGIRQGDTLLSSTFDLEAMIKLFEVIR---------IFELASDLEEMAAKFGCKCGNWPSTYLGLPLGGNSKNSLFWQPVYEKIQHKLHSWKYAFISK
Query: GGRHTLIQATLSSMPTYYLSLFKIPSKVATSLDKLVRDFFWEGSKGDGGMYNVNWE
GGR TLIQ+ L+ +P Y+LSLFK+P+ VA +++L RDF W G + V W+
Subjt: GGRHTLIQATLSSMPTYYLSLFKIPSKVATSLDKLVRDFFWEGSKGDGGMYNVNWE
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| A0A438F1Z0 LINE-1 retrotransposable element ORF2 protein | 8.2e-47 | 28.8 | Show/hide |
Query: REQVEDLTAQDHIQWHQHCKLKWLKEDDENTKFFHRILVARERKHSITAVLSREGVNIVTANDIEKEFIDFYKKLFTKDNHSRFLPTIVDWSPISENQAI
R+++EDL ++ +QW Q ++KW+KE D N+KFFHR+ R + I +++S G + I +E ++F+ L++K + +DW+PISE AI
Subjt: REQVEDLTAQDHIQWHQHCKLKWLKEDDENTKFFHRILVARERKHSITAVLSREGVNIVTANDIEKEFIDFYKKLFTKDNHSRFLPTIVDWSPISENQAI
Query: GLEAVFFLEEKVFQAMNSL------GSM---------------------------------------------------VLYAKGFGLIWRKWIRGCISS
L+ F EE + + + GS VL KGF WR W+RGC+SS
Subjt: GLEAVFFLEEKVFQAMNSL------GSM---------------------------------------------------VLYAKGFGLIWRKWIRGCISS
Query: VNHSIIINEKPRGKIILSRGIRQGDTLLSSTFDLEA------MIKLFEV--------------IRIFELASD----------------------------
+ +I++N + + SRG+RQGD L F L A MI+ E + + + A D
Subjt: VNHSIIINEKPRGKIILSRGIRQGDTLLSSTFDLEA------MIKLFEV--------------IRIFELASD----------------------------
Query: ------------------LEEMAAKFGCKCGNWPSTYLGLPLGGNSKNSLFWQPVYEKIQHKLHSWKYAFISKGGRHTLIQATLSSMPTYYLSLFKIPSK
L +A C+ WP +YLGLPLGGN K FW PV E+I +L WK A+ S GGR TLIQ+ LS +P+Y+LSLFKIP
Subjt: ------------------LEEMAAKFGCKCGNWPSTYLGLPLGGNSKNSLFWQPVYEKIQHKLHSWKYAFISKGGRHTLIQATLSSMPTYYLSLFKIPSK
Query: VATSLDKLVRDFFWEGSKGDGGMYNVNWERTQLP
+ + ++K+ RDF W G+ + + WE P
Subjt: VATSLDKLVRDFFWEGSKGDGGMYNVNWERTQLP
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| A0A438IJK4 Putative ribonuclease H protein | 1.4e-46 | 29.63 | Show/hide |
Query: REQVEDLTAQDHIQWHQHCKLKWLKEDDENTKFFHRILVARERKHSITAVLSREGVNIVTANDIEKEFIDFYKKLFTKDNHSRFLPTIVDWSPISENQAI
R+++EDL ++ +QW Q ++KW+KE D N+KFFHR+ R + I +++S G + I +E ++F+ L++K + +DW+ +
Subjt: REQVEDLTAQDHIQWHQHCKLKWLKEDDENTKFFHRILVARERKHSITAVLSREGVNIVTANDIEKEFIDFYKKLFTKDNHSRFLPTIVDWSPISENQAI
Query: GLEAVF--------FLEEKVFQAMNSL--GSMVLYA------------------KGFGLIWRKWIRGCISSVNHSIIINEKPRGKIILSRGIRQGDTLLS
G F L E +F + + G +L A +GF WR W+RGC+SS + +I++N +G + SRG+RQGD L
Subjt: GLEAVF--------FLEEKVFQAMNSL--GSMVLYA------------------KGFGLIWRKWIRGCISSVNHSIIINEKPRGKIILSRGIRQGDTLLS
Query: STFDLEA------MIKLFEV--------------IRIFELASD----------------------------------------------LEEMAAKFGCK
F L A MI+ E + + + A D L +A C+
Subjt: STFDLEA------MIKLFEV--------------IRIFELASD----------------------------------------------LEEMAAKFGCK
Query: CGNWPSTYLGLPLGGNSKNSLFWQPVYEKIQHKLHSWKYAFISKGGRHTLIQATLSSMPTYYLSLFKIPSKVATSLDKLVRDFFWEGSKGDGGMYNVNWE
WP +YLGLPLGGN K FW PV E+I +L WK A++S GGR TLIQ+ LS +P+Y+LSLFKIP +A+ ++K+ RDF W G+ + + WE
Subjt: CGNWPSTYLGLPLGGNSKNSLFWQPVYEKIQHKLHSWKYAFISKGGRHTLIQATLSSMPTYYLSLFKIPSKVATSLDKLVRDFFWEGSKGDGGMYNVNWE
Query: RTQLP
P
Subjt: RTQLP
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| A0A438K6E3 LINE-1 retrotransposable element ORF2 protein | 1.5e-45 | 27.78 | Show/hide |
Query: REQVEDLTAQDHIQWHQHCKLKWLKEDDENTKFFHRILVARERKHSITAVLSREGVNIVTANDIEKEFIDFYKKLFTKDNHSRFLPTIVDWSPISENQAI
R+++EDL ++ +QW Q ++KW+KE+D N+KFFHR+ R + I +++S G + I +E ++F++ L++K + +DW+PISE AI
Subjt: REQVEDLTAQDHIQWHQHCKLKWLKEDDENTKFFHRILVARERKHSITAVLSREGVNIVTANDIEKEFIDFYKKLFTKDNHSRFLPTIVDWSPISENQAI
Query: GLEAVFFLEE---KVFQ-------------------------------------------AMNSLGSM--------------------------------
L+ F EE VFQ S G+
Subjt: GLEAVFFLEE---KVFQ-------------------------------------------AMNSLGSM--------------------------------
Query: -------------VLYAKGFGLIWRKWIRGCISSVNHSIIINEKPRGKIILSRGIRQGDTLLSSTFDLEA------MIKLFEV--------------IRI
VL KGF WR W+RGC+SS + +I++N +G + SRG+RQGD L F L A MI+ E + +
Subjt: -------------VLYAKGFGLIWRKWIRGCISSVNHSIIINEKPRGKIILSRGIRQGDTLLSSTFDLEA------MIKLFEV--------------IRI
Query: FELASD----------------------------------------------LEEMAAKFGCKCGNWPSTYLGLPLGGNSKNSLFWQPVYEKIQHKLHSW
+ A D L +A C+ WP +YLGLPLGGN K FW PV E+I +L W
Subjt: FELASD----------------------------------------------LEEMAAKFGCKCGNWPSTYLGLPLGGNSKNSLFWQPVYEKIQHKLHSW
Query: KYAFISKGGRHTLIQATLSSMPTYYLSLFKIPSKVATSLDKLVRDFFWEGSKGDGGMYNVNWERTQLP
K A++S GGR TLIQ+ LS +P+Y+LSLFKIP +A+ ++K+ RDF W G+ + + WE P
Subjt: KYAFISKGGRHTLIQATLSSMPTYYLSLFKIPSKVATSLDKLVRDFFWEGSKGDGGMYNVNWERTQLP
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| A0A5D3BLV7 LINE-1 retrotransposable element ORF2 protein | 1.0e-44 | 29.57 | Show/hide |
Query: HKKCNLREQVEDLTAQDHIQWHQHCKLKWLKEDDENTKFFHRILVARERKHSITAVLSREGVNIVTANDIEKEFIDFYKKLFTKDNHS--RFLPTIVDWS
+++ L+ + +L+ ++ W+Q K WL+E DEN+ FFHRI +R+++ I + EG T N I FI F+ +++ S F+ + DW+
Subjt: HKKCNLREQVEDLTAQDHIQWHQHCKLKWLKEDDENTKFFHRILVARERKHSITAVLSREGVNIVTANDIEKEFIDFYKKLFTKDNHS--RFLPTIVDWS
Query: PISE-----------------------------------------------------------------------NQAIGLEAV-----FFLE---EKVF
PI+ N+A+ V F L+ EK F
Subjt: PISE-----------------------------------------------------------------------NQAIGLEAV-----FFLE---EKVF
Query: QAMN-SLGSMVLYAKGFGLIWRKWIRGCISSVNHSIIINEKPRGKIILSRGIRQGDTLLSSTF-------------------------------------
+N VL K F WRKWIRGCIS+V +S+IIN +P+G+I +RG+RQGD L F
Subjt: QAMN-SLGSMVLYAKGFGLIWRKWIRGCISSVNHSIIINEKPRGKIILSRGIRQGDTLLSSTF-------------------------------------
Query: --------DLEAMIK-LFEVIRIFELASDL-------------------EEMAAKFGCKCGNWPSTYLGLPLGGNSKNSLFWQPVYEKIQHKLHSWKYAF
D + +K L + +FE AS L +E A+ +G C + P +YLG+PLGGN K++LFW+ V +KIQ KL++WKYA
Subjt: --------DLEAMIK-LFEVIRIFELASDL-------------------EEMAAKFGCKCGNWPSTYLGLPLGGNSKNSLFWQPVYEKIQHKLHSWKYAF
Query: ISKGGRHTLIQATLSSMPTYYLSLFKIPSKVATSLDKLVRDFFWEGSKGDGGMYNVNWER
ISKGGR TLI++TLSS+P Y LS+F+ PS +++KL R F W+G+ G G + +NW +
Subjt: ISKGGRHTLIQATLSSMPTYYLSLFKIPSKVATSLDKLVRDFFWEGSKGDGGMYNVNWER
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