CuGenDBv2

Gene ID	Lag0032013
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	gibberellin 2-beta-dioxygenase 1
Genome location	chr11:22576715..22577400
RNA-Seq Expression	Lag0032013
Synteny	Lag0032013
Gene Ontology terms	NA
InterPro domains	IPR026992 - Non-haem dioxygenase N-terminal domain IPR027443 - Isopenicillin N synthase-like superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0052887.1 1-aminocyclopropane-1-carboxylate oxidase [Cucumis melo var. makuwa]

9.0e-27

69.3

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Query:  HIHSGVTAAPHPTPSSQTNHLSTSAAR------------RCSL-QGRSPSVRSPPTISFSDSPNRDFLDRLLSAAIDLGFFQLTNHKISSQLALSAESES
        +IH G TAAP PTPSSQTNHLSTSAA               SL   RSPSV +PPTISFS+SPN D L+ LLSAA +LGFFQLT+HKISS LALSAESES
Subjt:  HIHSGVTAAPHPTPSSQTNHLSTSAAR------------RCSL-QGRSPSVRSPPTISFSDSPNRDFLDRLLSAAIDLGFFQLTNHKISSQLALSAESES

Query:  AALFDLPAEKKESL
        AALF+L AEKKESL
Subjt:  AALFDLPAEKKESL

XP_008465218.1 PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase [Cucumis melo]

9.0e-27

69.3

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Query:  HIHSGVTAAPHPTPSSQTNHLSTSAAR------------RCSL-QGRSPSVRSPPTISFSDSPNRDFLDRLLSAAIDLGFFQLTNHKISSQLALSAESES
        +IH G TAAP PTPSSQTNHLSTSAA               SL   RSPSV +PPTISFS+SPN D L+ LLSAA +LGFFQLT+HKISS LALSAESES
Subjt:  HIHSGVTAAPHPTPSSQTNHLSTSAAR------------RCSL-QGRSPSVRSPPTISFSDSPNRDFLDRLLSAAIDLGFFQLTNHKISSQLALSAESES

Query:  AALFDLPAEKKESL
        AALF+L AEKKESL
Subjt:  AALFDLPAEKKESL

XP_011654997.1 gibberellin 2-beta-dioxygenase 2 isoform X1 [Cucumis sativus]

1.4e-27

70.18

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Query:  HIHSGVTAAPHPTPSSQTNHLSTSAAR------------RCSL-QGRSPSVRSPPTISFSDSPNRDFLDRLLSAAIDLGFFQLTNHKISSQLALSAESES
        +IH+G TAAP PTPSSQTNHLSTSAA               SL   RSPSV  PPTISFS+SPN D L+RLLSAA +LGFFQLT+HKISS LALSAESES
Subjt:  HIHSGVTAAPHPTPSSQTNHLSTSAAR------------RCSL-QGRSPSVRSPPTISFSDSPNRDFLDRLLSAAIDLGFFQLTNHKISSQLALSAESES

Query:  AALFDLPAEKKESL
        A LF+LPAEKKESL
Subjt:  AALFDLPAEKKESL

XP_011654998.1 2'-deoxymugineic-acid 2'-dioxygenase isoform X2 [Cucumis sativus]

1.4e-27

70.18

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Query:  HIHSGVTAAPHPTPSSQTNHLSTSAAR------------RCSL-QGRSPSVRSPPTISFSDSPNRDFLDRLLSAAIDLGFFQLTNHKISSQLALSAESES
        +IH+G TAAP PTPSSQTNHLSTSAA               SL   RSPSV  PPTISFS+SPN D L+RLLSAA +LGFFQLT+HKISS LALSAESES
Subjt:  HIHSGVTAAPHPTPSSQTNHLSTSAAR------------RCSL-QGRSPSVRSPPTISFSDSPNRDFLDRLLSAAIDLGFFQLTNHKISSQLALSAESES

Query:  AALFDLPAEKKESL
        A LF+LPAEKKESL
Subjt:  AALFDLPAEKKESL

XP_038892860.1 gibberellin 2-beta-dioxygenase 6 [Benincasa hispida]

8.7e-30

72.81

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Query:  HIHSGVTAAPHPTPSSQTNHLSTSAAR------------RCSLQGRS-PSVRSPPTISFSDSPNRDFLDRLLSAAIDLGFFQLTNHKISSQLALSAESES
        +IH G TAAP PTPSSQTNHLSTSAA               SL  R  PSVRSPPTISFS+SPN D LDRLLSAA +LGFFQLT+HKISS LALSAESE+
Subjt:  HIHSGVTAAPHPTPSSQTNHLSTSAAR------------RCSLQGRS-PSVRSPPTISFSDSPNRDFLDRLLSAAIDLGFFQLTNHKISSQLALSAESES

Query:  AALFDLPAEKKESL
        AALFDLPAEKKESL
Subjt:  AALFDLPAEKKESL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KP52 DIOX_N domain-containing protein

6.7e-28

70.18

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Query:  HIHSGVTAAPHPTPSSQTNHLSTSAAR------------RCSL-QGRSPSVRSPPTISFSDSPNRDFLDRLLSAAIDLGFFQLTNHKISSQLALSAESES
        +IH+G TAAP PTPSSQTNHLSTSAA               SL   RSPSV  PPTISFS+SPN D L+RLLSAA +LGFFQLT+HKISS LALSAESES
Subjt:  HIHSGVTAAPHPTPSSQTNHLSTSAAR------------RCSL-QGRSPSVRSPPTISFSDSPNRDFLDRLLSAAIDLGFFQLTNHKISSQLALSAESES

Query:  AALFDLPAEKKESL
        A LF+LPAEKKESL
Subjt:  AALFDLPAEKKESL

A0A1S3CNS4 1-aminocyclopropane-1-carboxylate oxidase

4.4e-27

69.3

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Query:  HIHSGVTAAPHPTPSSQTNHLSTSAAR------------RCSL-QGRSPSVRSPPTISFSDSPNRDFLDRLLSAAIDLGFFQLTNHKISSQLALSAESES
        +IH G TAAP PTPSSQTNHLSTSAA               SL   RSPSV +PPTISFS+SPN D L+ LLSAA +LGFFQLT+HKISS LALSAESES
Subjt:  HIHSGVTAAPHPTPSSQTNHLSTSAAR------------RCSL-QGRSPSVRSPPTISFSDSPNRDFLDRLLSAAIDLGFFQLTNHKISSQLALSAESES

Query:  AALFDLPAEKKESL
        AALF+L AEKKESL
Subjt:  AALFDLPAEKKESL

A0A5A7UEE7 1-aminocyclopropane-1-carboxylate oxidase

4.4e-27

69.3

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Query:  HIHSGVTAAPHPTPSSQTNHLSTSAAR------------RCSL-QGRSPSVRSPPTISFSDSPNRDFLDRLLSAAIDLGFFQLTNHKISSQLALSAESES
        +IH G TAAP PTPSSQTNHLSTSAA               SL   RSPSV +PPTISFS+SPN D L+ LLSAA +LGFFQLT+HKISS LALSAESES
Subjt:  HIHSGVTAAPHPTPSSQTNHLSTSAAR------------RCSL-QGRSPSVRSPPTISFSDSPNRDFLDRLLSAAIDLGFFQLTNHKISSQLALSAESES

Query:  AALFDLPAEKKESL
        AALF+L AEKKESL
Subjt:  AALFDLPAEKKESL

A0A6J1CYY0 gibberellin 2-beta-dioxygenase 2

2.0e-24

66.67

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Query:  SGVTAAPHPTPSSQTNHLSTSAAR------------RCSL-QGRSPSVRSPPTISFSDSPNRDFLDRLLSAAIDLGFFQLTNHKISSQLALSAESESAAL
        +G TAAP PTPSSQT+HLSTSAA               SL   RSPSVRSPPTISFS++ N   LDRLLSA+ +LGFFQLT+H+ISS+LALSAESESAAL
Subjt:  SGVTAAPHPTPSSQTNHLSTSAAR------------RCSL-QGRSPSVRSPPTISFSDSPNRDFLDRLLSAAIDLGFFQLTNHKISSQLALSAESESAAL

Query:  FDLPAEKKESL
        F LP E KESL
Subjt:  FDLPAEKKESL

A0A6J1FRA7 gibberellin 3-beta-dioxygenase 4

1.0e-23

64.04

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Query:  HIHSGVTAAPHPTPSSQTNHLSTSAAR------------RCSL-QGRSPSVRSPPTISFSDSPNRDFLDRLLSAAIDLGFFQLTNHKISSQLALSAESES
        +I  G TAAP PTPSSQTNHLSTSAA             + SL   RS SV SPPTISFSDSP+ +F  RLLSA  + GFFQ+T+HKISS L LSAESES
Subjt:  HIHSGVTAAPHPTPSSQTNHLSTSAAR------------RCSL-QGRSPSVRSPPTISFSDSPNRDFLDRLLSAAIDLGFFQLTNHKISSQLALSAESES

Query:  AALFDLPAEKKESL
        AALFD+ AEKKE+L
Subjt:  AALFDLPAEKKESL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G11150.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

2.5e-06

37.39

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Query:  HSGVTAAPHPTPS----SQTNHLSTSAARRCSLQGRSP---------SVRSPPTISFSDSPNRDFLDRLLSAAIDLGFFQLTNHK----ISSQLALSAES
        H G TAAP PTPS    + T+   T+     SL  R P         S+ S P +S S     ++ D L+SA  D G+FQL N          +A +AES
Subjt:  HSGVTAAPHPTPS----SQTNHLSTSAARRCSLQGRSP---------SVRSPPTISFSDSPNRDFLDRLLSAAIDLGFFQLTNHK----ISSQLALSAES

Query:  ESAALFDLPAEKKES
        +S +L +L  EKKES
Subjt:  ESAALFDLPAEKKES

Sequences

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CDS sequence

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ATGGGTAATTTCATTCTAAAACTTAAGAATACATCCGAAGATGGATCTGTTCGAGCAATCGAGGAATCCATAGCAATAGAAAAACCAGAGATGAGATGCTACCAACACAT
CCACAGCGGCGTCACTGCAGCTCCGCATCCTACTCCTTCCTCACAAACCAACCATCTCTCCACCTCCGCCGCGCGCCGATGCTCTCTCCAGGGCCGCTCCCCTTCCGTTA
GGTCACCGCCAACGATTTCCTTCTCAGACTCTCCCAATCGCGACTTTCTCGATCGCCTTCTCTCCGCCGCCATTGACCTTGGCTTCTTCCAACTCACCAATCATAAAATC
TCCTCTCAACTCGCTCTTTCCGCCGAGTCTGAGTCCGCCGCTCTATTCGACCTTCCGGCAGAGAAGAAGGAATCTCTTAACAAGAACACATTAATTGACCTAAAACAACA
TCAAATTAACCCATTCCACTGA

mRNA sequence

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Protein sequence

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MGNFILKLKNTSEDGSVRAIEESIAIEKPEMRCYQHIHSGVTAAPHPTPSSQTNHLSTSAARRCSLQGRSPSVRSPPTISFSDSPNRDFLDRLLSAAIDLGFFQLTNHKI
SSQLALSAESESAALFDLPAEKKESLNKNTLIDLKQHQINPFH

Lag0032013 (gene) of Sponge gourd (AG-4) v1 genome