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Lag0032016 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032016
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr11:22593770..22595083
RNA-Seq ExpressionLag0032016
SyntenyLag0032016
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]8.2e-2041.43Show/hide
Query:  VQGVPVDWSPGAINSLFNLQDFPHAGFNEMVVAPSSDQLYAAVREVGIEGAQWRLSKTEKHTFQATYLKSEDNTWMGFVKLHLLPTTHDSKVSRDRVLLV
        V+GV V WS  AIN++F L D P    +E +   +   L   +  V + GA+W +S    +T   + L      W  F+K HLLPTTH   VS+DR+LL+
Subjt:  VQGVPVDWSPGAINSLFNLQDFPHAGFNEMVVAPSSDQLYAAVREVGIEGAQWRLSKTEKHTFQATYLKSEDNTWMGFVKLHLLPTTHDSKVSRDRVLLV

Query:  FVILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLC
          +L   SI+VG++I SEI  C  +K G LFFP+ IT LC
Subjt:  FVILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLC

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]2.0e-1840.71Show/hide
Query:  VQGVPVDWSPGAINSLFNLQDFPHAGFNEMVVAPSSDQLYAAVREVGIEGAQWRLSKTEKHTFQATYLKSEDNTWMGFVKLHLLPTTHDSKVSRDRVLLV
        V+GV V WS  AIN++F L D P    +E +   +   L   +  V   GA+W +S    +T   + L      W  F+K  LLPTTH   VS+DR+LL+
Subjt:  VQGVPVDWSPGAINSLFNLQDFPHAGFNEMVVAPSSDQLYAAVREVGIEGAQWRLSKTEKHTFQATYLKSEDNTWMGFVKLHLLPTTHDSKVSRDRVLLV

Query:  FVILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLC
          +L   SI+VG++I SEI  C  +K G LFFP+ IT LC
Subjt:  FVILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLC

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]8.5e-1740Show/hide
Query:  VQGVPVDWSPGAINSLFNLQDFPHAGFNEMVVAPSSDQLYAAVREVGIEGAQWRLSKTEKHTFQATYLKSEDNTWMGFVKLHLLPTTHDSKVSRDRVLLV
        V+GV V  S  AIN+++ L D P    +E V A +  +L   +  V I GA+W +S    +T   + L      W  F+K  LLPTTH   VS++RVLL+
Subjt:  VQGVPVDWSPGAINSLFNLQDFPHAGFNEMVVAPSSDQLYAAVREVGIEGAQWRLSKTEKHTFQATYLKSEDNTWMGFVKLHLLPTTHDSKVSRDRVLLV

Query:  FVILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLC
        + +L   SI+VG+II  EI     +K G LFFP+ IT +C
Subjt:  FVILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLC

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]9.1e-1941.55Show/hide
Query:  VQGVPVDWSPGAINSLFNLQD--FPHAGFNEMVVAPSSDQLYAAVREVGIEGAQWRLSKTEKHTFQATYLKSEDNTWMGFVKLHLLPTTHDSKVSRDRVL
        V+GV V WS  AIN++F L D    H+ F E +  P   +L   +  V   GA+W +S    +T   + L      W  F+K  LLPTTH   VS+DR+L
Subjt:  VQGVPVDWSPGAINSLFNLQD--FPHAGFNEMVVAPSSDQLYAAVREVGIEGAQWRLSKTEKHTFQATYLKSEDNTWMGFVKLHLLPTTHDSKVSRDRVL

Query:  LVFVILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLC
        L+  +L   SI+VG++I SEI  C  +K G LFFP+ IT LC
Subjt:  LVFVILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLC

TYH88163.1 hypothetical protein ES332_D01G168900v1 [Gossypium tomentosum]1.7e-1737.59Show/hide
Query:  IVQGVPVDWSPGAINSLFNLQDFPHAGFNEMVVAPSSDQLYAAVREVGIEGAQWRLSKTEKHTFQATYLKSEDNTWMGFVKLHLLPTTHDSKVSRDRVLL
        IV+   V  +  +IN LFNL D     +  M+   + D L   +  V   G+QW + K   H+ +  YLK   N W  FV+   +P +H   +S +R+LL
Subjt:  IVQGVPVDWSPGAINSLFNLQDFPHAGFNEMVVAPSSDQLYAAVREVGIEGAQWRLSKTEKHTFQATYLKSEDNTWMGFVKLHLLPTTHDSKVSRDRVLL

Query:  VFVILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLC
        ++ IL   SI+VGKII  EI++C +KK G ++FP+ IT LC
Subjt:  VFVILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLC

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)4.0e-2041.43Show/hide
Query:  VQGVPVDWSPGAINSLFNLQDFPHAGFNEMVVAPSSDQLYAAVREVGIEGAQWRLSKTEKHTFQATYLKSEDNTWMGFVKLHLLPTTHDSKVSRDRVLLV
        V+GV V WS  AIN++F L D P    +E +   +   L   +  V + GA+W +S    +T   + L      W  F+K HLLPTTH   VS+DR+LL+
Subjt:  VQGVPVDWSPGAINSLFNLQDFPHAGFNEMVVAPSSDQLYAAVREVGIEGAQWRLSKTEKHTFQATYLKSEDNTWMGFVKLHLLPTTHDSKVSRDRVLLV

Query:  FVILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLC
          +L   SI+VG++I SEI  C  +K G LFFP+ IT LC
Subjt:  FVILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLC

A0A2P5BCG4 Uncharacterized protein (Fragment)9.8e-1940.71Show/hide
Query:  VQGVPVDWSPGAINSLFNLQDFPHAGFNEMVVAPSSDQLYAAVREVGIEGAQWRLSKTEKHTFQATYLKSEDNTWMGFVKLHLLPTTHDSKVSRDRVLLV
        V+GV V WS  AIN++F L D P    +E +   +   L   +  V   GA+W +S    +T   + L      W  F+K  LLPTTH   VS+DR+LL+
Subjt:  VQGVPVDWSPGAINSLFNLQDFPHAGFNEMVVAPSSDQLYAAVREVGIEGAQWRLSKTEKHTFQATYLKSEDNTWMGFVKLHLLPTTHDSKVSRDRVLLV

Query:  FVILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLC
          +L   SI+VG++I SEI  C  +K G LFFP+ IT LC
Subjt:  FVILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLC

A0A2P5CPE8 Uncharacterized protein4.1e-1740Show/hide
Query:  VQGVPVDWSPGAINSLFNLQDFPHAGFNEMVVAPSSDQLYAAVREVGIEGAQWRLSKTEKHTFQATYLKSEDNTWMGFVKLHLLPTTHDSKVSRDRVLLV
        V+GV V  S  AIN+++ L D P    +E V A +  +L   +  V I GA+W +S    +T   + L      W  F+K  LLPTTH   VS++RVLL+
Subjt:  VQGVPVDWSPGAINSLFNLQDFPHAGFNEMVVAPSSDQLYAAVREVGIEGAQWRLSKTEKHTFQATYLKSEDNTWMGFVKLHLLPTTHDSKVSRDRVLLV

Query:  FVILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLC
        + +L   SI+VG+II  EI     +K G LFFP+ IT +C
Subjt:  FVILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLC

A0A2P5DXM3 Uncharacterized protein4.4e-1941.55Show/hide
Query:  VQGVPVDWSPGAINSLFNLQD--FPHAGFNEMVVAPSSDQLYAAVREVGIEGAQWRLSKTEKHTFQATYLKSEDNTWMGFVKLHLLPTTHDSKVSRDRVL
        V+GV V WS  AIN++F L D    H+ F E +  P   +L   +  V   GA+W +S    +T   + L      W  F+K  LLPTTH   VS+DR+L
Subjt:  VQGVPVDWSPGAINSLFNLQD--FPHAGFNEMVVAPSSDQLYAAVREVGIEGAQWRLSKTEKHTFQATYLKSEDNTWMGFVKLHLLPTTHDSKVSRDRVL

Query:  LVFVILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLC
        L+  +L   SI+VG++I SEI  C  +K G LFFP+ IT LC
Subjt:  LVFVILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLC

A0A5D2MA47 Uncharacterized protein8.3e-1837.59Show/hide
Query:  IVQGVPVDWSPGAINSLFNLQDFPHAGFNEMVVAPSSDQLYAAVREVGIEGAQWRLSKTEKHTFQATYLKSEDNTWMGFVKLHLLPTTHDSKVSRDRVLL
        IV+   V  +  +IN LFNL D     +  M+   + D L   +  V   G+QW + K   H+ +  YLK   N W  FV+   +P +H   +S +R+LL
Subjt:  IVQGVPVDWSPGAINSLFNLQDFPHAGFNEMVVAPSSDQLYAAVREVGIEGAQWRLSKTEKHTFQATYLKSEDNTWMGFVKLHLLPTTHDSKVSRDRVLL

Query:  VFVILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLC
        ++ IL   SI+VGKII  EI++C +KK G ++FP+ IT LC
Subjt:  VFVILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAAACGAGAGCAAGAAAAGAGCGGGAAAATGAGGAAGAAGAGGTAGCTGTTACCCCTGAGGTACAGAAAGTGAAAACGAAGAAGAAGAAAACGCCGGAGGAAAA
AGAAGCAAAAAGAAGGAGAAGGCAACAGAGGGCTAAGGACCAAGAAACTGTCCAGAAAGCGGCAGAAGATGTTGTTACTGCGGTAGTGGAAGAAGAAAATCCGAAAGAGC
CAGAAGTACAGAACCAAGGACAGACCGACTCGATAATCGCTGATACGGAGGAGGTGCGAGAAGAGAATACAGAAGATGTTCAAGAAAAGCAGACTGAGGATGTGCAAAGA
GAACAGGCAGAGGTTACGCCTGAAGAAGATAATGAGCCAGTAGAAGAGCAGGAGAAGAAAGAGGCCGAGGAAAAAGCAAGAGAGGAGGCAGAGAAAAAGGCTGAGGAAGA
AATTGTGTCCAAACAAAAGGAAGACAAGGGCAAGGGTATTGCTGAAGCATCGGTTGAAGCTGACGAAAATGAGGAGCCACGATTGTCGTACAATTGCTTCATCAATAATC
TTGCTCGGGCAAAATACATAGAAATGCTGAAACGGAACTTTCTGTTCGAACGGGCTATAGTTCAAGGAGTACCCGTTGACTGGAGCCCAGGAGCTATTAATTCTTTATTC
AATCTCCAGGACTTTCCGCACGCAGGCTTTAATGAGATGGTGGTGGCACCATCGAGTGATCAATTGTATGCGGCTGTCCGAGAGGTTGGCATCGAGGGGGCTCAATGGAG
ATTGTCGAAGACAGAAAAACATACATTTCAAGCTACTTATCTGAAGAGTGAGGATAATACATGGATGGGCTTCGTCAAGCTACACCTACTGCCGACAACTCACGATTCAA
AGGTGTCTCGGGACCGGGTACTGCTTGTGTTTGTCATTCTTCGTTCGATGAGTATTGATGTGGGTAAAATAATTTCTTCTGAGATTTATGACTGCTGGCGGAAAAAGGTT
GGGAAGCTATTTTTCCCTAACACTATCACGATGCTATGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAAACGAGAGCAAGAAAAGAGCGGGAAAATGAGGAAGAAGAGGTAGCTGTTACCCCTGAGGTACAGAAAGTGAAAACGAAGAAGAAGAAAACGCCGGAGGAAAA
AGAAGCAAAAAGAAGGAGAAGGCAACAGAGGGCTAAGGACCAAGAAACTGTCCAGAAAGCGGCAGAAGATGTTGTTACTGCGGTAGTGGAAGAAGAAAATCCGAAAGAGC
CAGAAGTACAGAACCAAGGACAGACCGACTCGATAATCGCTGATACGGAGGAGGTGCGAGAAGAGAATACAGAAGATGTTCAAGAAAAGCAGACTGAGGATGTGCAAAGA
GAACAGGCAGAGGTTACGCCTGAAGAAGATAATGAGCCAGTAGAAGAGCAGGAGAAGAAAGAGGCCGAGGAAAAAGCAAGAGAGGAGGCAGAGAAAAAGGCTGAGGAAGA
AATTGTGTCCAAACAAAAGGAAGACAAGGGCAAGGGTATTGCTGAAGCATCGGTTGAAGCTGACGAAAATGAGGAGCCACGATTGTCGTACAATTGCTTCATCAATAATC
TTGCTCGGGCAAAATACATAGAAATGCTGAAACGGAACTTTCTGTTCGAACGGGCTATAGTTCAAGGAGTACCCGTTGACTGGAGCCCAGGAGCTATTAATTCTTTATTC
AATCTCCAGGACTTTCCGCACGCAGGCTTTAATGAGATGGTGGTGGCACCATCGAGTGATCAATTGTATGCGGCTGTCCGAGAGGTTGGCATCGAGGGGGCTCAATGGAG
ATTGTCGAAGACAGAAAAACATACATTTCAAGCTACTTATCTGAAGAGTGAGGATAATACATGGATGGGCTTCGTCAAGCTACACCTACTGCCGACAACTCACGATTCAA
AGGTGTCTCGGGACCGGGTACTGCTTGTGTTTGTCATTCTTCGTTCGATGAGTATTGATGTGGGTAAAATAATTTCTTCTGAGATTTATGACTGCTGGCGGAAAAAGGTT
GGGAAGCTATTTTTCCCTAACACTATCACGATGCTATGCTGA
Protein sequenceShow/hide protein sequence
MAKTRARKERENEEEEVAVTPEVQKVKTKKKKTPEEKEAKRRRRQQRAKDQETVQKAAEDVVTAVVEEENPKEPEVQNQGQTDSIIADTEEVREENTEDVQEKQTEDVQR
EQAEVTPEEDNEPVEEQEKKEAEEKAREEAEKKAEEEIVSKQKEDKGKGIAEASVEADENEEPRLSYNCFINNLARAKYIEMLKRNFLFERAIVQGVPVDWSPGAINSLF
NLQDFPHAGFNEMVVAPSSDQLYAAVREVGIEGAQWRLSKTEKHTFQATYLKSEDNTWMGFVKLHLLPTTHDSKVSRDRVLLVFVILRSMSIDVGKIISSEIYDCWRKKV
GKLFFPNTITMLC