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Lag0032020 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032020
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationchr11:22668329..22670427
RNA-Seq ExpressionLag0032020
SyntenyLag0032020
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]3.8e-0937.86Show/hide
Query:  FVNDLARAKYQEVLKRDFLFERGFGSDLPRFLESGIVNLG-----------WRQFCAKPEPVNSNIVREFYANLDIKNDFEVIVRGVPVQWSPEAINELF
        FV++ A+  YQ +  R   FE GF      F E+   NLG           W++F   P PVN+ IV+EFY+N+   N   V+VRG+ ++++P AIN  F
Subjt:  FVNDLARAKYQEVLKRDFLFERGFGSDLPRFLESGIVNLG-----------WRQFCAKPEPVNSNIVREFYANLDIKNDFEVIVRGVPVQWSPEAINELF

Query:  DLQ
         LQ
Subjt:  DLQ

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]1.4e-0840.78Show/hide
Query:  IRFVNDLARAKYQ-EVLKRDFLFERGFGSD-------LPRFLESGIVNLGWRQFCAKPEPVNSNIVREFYANLDIKNDFEVIVRGVPVQWSPEAINELFD
        ++F  + A  +Y+  +  R    E+GF  D       LP F+   I    W+QFCA PE     +VREFYANL    +  V VRGV V WS EAIN +F 
Subjt:  IRFVNDLARAKYQ-EVLKRDFLFERGFGSD-------LPRFLESGIVNLGWRQFCAKPEPVNSNIVREFYANLDIKNDFEVIVRGVPVQWSPEAINELFD

Query:  LQD
        L D
Subjt:  LQD

PON42276.1 hypothetical protein PanWU01x14_283280 [Parasponia andersonii]8.4e-0938.24Show/hide
Query:  IRFVNDLARAKYQE-VLKRDFLFERGFGSD------LPRFLESGIVNLGWRQFCAKPEPVNSNIVREFYANLDIKNDFEVIVRGVPVQWSPEAINELFDL
        ++  ++ A  +Y+E +  R    E+GF  D       P F+E  I    W+ FCA PE + + +VREFYAN+   +D  V VRGV V  S EAIN ++ L
Subjt:  IRFVNDLARAKYQE-VLKRDFLFERGFGSD------LPRFLESGIVNLGWRQFCAKPEPVNSNIVREFYANLDIKNDFEVIVRGVPVQWSPEAINELFDL

Query:  QD
         D
Subjt:  QD

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]8.4e-0940.78Show/hide
Query:  IRFVNDLARAKYQ-EVLKRDFLFERGFGSD-------LPRFLESGIVNLGWRQFCAKPEPVNSNIVREFYANLDIKNDFEVIVRGVPVQWSPEAINELFD
        ++F  + A  +Y+  +  R    E+GF  D       LP F+   I    W+QFCA PE     +VREFYANL    +  V VRGV V WS EAIN +F 
Subjt:  IRFVNDLARAKYQ-EVLKRDFLFERGFGSD-------LPRFLESGIVNLGWRQFCAKPEPVNSNIVREFYANLDIKNDFEVIVRGVPVQWSPEAINELFD

Query:  LQD
        L D
Subjt:  LQD

PON90635.1 hypothetical protein TorRG33x02_134920 [Trema orientale]1.1e-0840.2Show/hide
Query:  IRFVNDLARAKYQEVLKRDFL-FERGFGSD------LPRFLESGIVNLGWRQFCAKPEPVNSNIVREFYANLDIKNDFEVIVRGVPVQWSPEAINELFDL
        ++F ++ A A+Y+E +K   L  E+GF  +       P F+   I+   W+ FCA  E     +VREFYANL    +  V V+GV V WS EAIN LF L
Subjt:  IRFVNDLARAKYQEVLKRDFL-FERGFGSD------LPRFLESGIVNLGWRQFCAKPEPVNSNIVREFYANLDIKNDFEVIVRGVPVQWSPEAINELFDL

Query:  QD
         D
Subjt:  QD

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)6.9e-0940.78Show/hide
Query:  IRFVNDLARAKYQ-EVLKRDFLFERGFGSD-------LPRFLESGIVNLGWRQFCAKPEPVNSNIVREFYANLDIKNDFEVIVRGVPVQWSPEAINELFD
        ++F  + A  +Y+  +  R    E+GF  D       LP F+   I    W+QFCA PE     +VREFYANL    +  V VRGV V WS EAIN +F 
Subjt:  IRFVNDLARAKYQ-EVLKRDFLFERGFGSD-------LPRFLESGIVNLGWRQFCAKPEPVNSNIVREFYANLDIKNDFEVIVRGVPVQWSPEAINELFD

Query:  LQD
        L D
Subjt:  LQD

A0A2P5B0K0 Uncharacterized protein4.1e-0938.24Show/hide
Query:  IRFVNDLARAKYQE-VLKRDFLFERGFGSD------LPRFLESGIVNLGWRQFCAKPEPVNSNIVREFYANLDIKNDFEVIVRGVPVQWSPEAINELFDL
        ++  ++ A  +Y+E +  R    E+GF  D       P F+E  I    W+ FCA PE + + +VREFYAN+   +D  V VRGV V  S EAIN ++ L
Subjt:  IRFVNDLARAKYQE-VLKRDFLFERGFGSD------LPRFLESGIVNLGWRQFCAKPEPVNSNIVREFYANLDIKNDFEVIVRGVPVQWSPEAINELFDL

Query:  QD
         D
Subjt:  QD

A0A2P5BCG4 Uncharacterized protein (Fragment)4.1e-0940.78Show/hide
Query:  IRFVNDLARAKYQ-EVLKRDFLFERGFGSD-------LPRFLESGIVNLGWRQFCAKPEPVNSNIVREFYANLDIKNDFEVIVRGVPVQWSPEAINELFD
        ++F  + A  +Y+  +  R    E+GF  D       LP F+   I    W+QFCA PE     +VREFYANL    +  V VRGV V WS EAIN +F 
Subjt:  IRFVNDLARAKYQ-EVLKRDFLFERGFGSD-------LPRFLESGIVNLGWRQFCAKPEPVNSNIVREFYANLDIKNDFEVIVRGVPVQWSPEAINELFD

Query:  LQD
        L D
Subjt:  LQD

A0A2P5EYL5 Uncharacterized protein5.3e-0940.2Show/hide
Query:  IRFVNDLARAKYQEVLKRDFL-FERGFGSD------LPRFLESGIVNLGWRQFCAKPEPVNSNIVREFYANLDIKNDFEVIVRGVPVQWSPEAINELFDL
        ++F ++ A A+Y+E +K   L  E+GF  +       P F+   I+   W+ FCA  E     +VREFYANL    +  V V+GV V WS EAIN LF L
Subjt:  IRFVNDLARAKYQEVLKRDFL-FERGFGSD------LPRFLESGIVNLGWRQFCAKPEPVNSNIVREFYANLDIKNDFEVIVRGVPVQWSPEAINELFDL

Query:  QD
         D
Subjt:  QD

A0A6A2ZUE4 Uncharacterized protein1.8e-0937.86Show/hide
Query:  FVNDLARAKYQEVLKRDFLFERGFGSDLPRFLESGIVNLG-----------WRQFCAKPEPVNSNIVREFYANLDIKNDFEVIVRGVPVQWSPEAINELF
        FV++ A+  YQ +  R   FE GF      F E+   NLG           W++F   P PVN+ IV+EFY+N+   N   V+VRG+ ++++P AIN  F
Subjt:  FVNDLARAKYQEVLKRDFLFERGFGSDLPRFLESGIVNLG-----------WRQFCAKPEPVNSNIVREFYANLDIKNDFEVIVRGVPVQWSPEAINELF

Query:  DLQ
         LQ
Subjt:  DLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCTTGGAAAACCACTTGGATCTTCTCTACTATCCTCAGGCCTTGAAACGGATTATGGATCCTTAATTGATAGGAATTGGAAGAAAAAGCTTGAAGTTCAAGCTTC
AACTATGAGATTTTCTCTAATTCATTCGGCTTCTTTGAGAATAACAGGTTCAGCAGATTATTGCGGCAAAGATATTGCTGGAGCAAATTATTCCGAGATAGAAGGGTTTC
CGTTGGAATTTATTATTGTTACCGTTAGACTTAGCTTTAAATTCTCGCAGGGCAAATCCTTTCGGTTAGGATTCTTGTTTGCTGCAGCCCTATTTATTCGCAATCTCTGG
AATGCTGAGAAGGAACATGAAACAGATGTCGAAGGACAAGTCGCGGGTGTGCCTGAAAAAGAGAAAACACCGGAGCTGGTGCAGGAGGCCCATGTTGAAATTATTATGCC
TGAACCACCCAAGCGCTGCCGCATCAAGAGAAAGGCGGGTCGCGTGAGGATGGTTCGGAACACTCCATCACCTCCGACGTCGGACTCTGAGGAAGAAAGAAGGGAAGCTG
AGAATAAGGAAAAAGAAGAAGAGGCAAGAAAGGAAGAGGAAGAGCGTTTGCGTGTCCAGAGAGAAAGCAGGGGCAAAGGAATTGCCGAAGCATCAGGAGAAATTGAGGAG
CCGAGGGCGCCATTCATTCGCTTCGTCAATGATCTTGCTCGAGCAAAATACCAGGAGGTACTGAAACGGGACTTCTTGTTCGAACGTGGATTTGGCAGTGATTTGCCTAG
GTTCTTGGAGTCTGGAATAGTGAACCTTGGATGGAGGCAATTTTGTGCGAAACCAGAACCTGTCAATTCCAACATTGTTCGAGAATTTTATGCCAATCTTGACATTAAGA
ATGATTTTGAGGTCATCGTTCGAGGAGTGCCTGTACAGTGGAGTCCTGAGGCCATTAATGAACTGTTCGATCTCCAAGATTTCCGCATGCCGTTTTTAATGAGATGGTGG
CTGCACCATCTAGTGATCAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATCTTGGAAAACCACTTGGATCTTCTCTACTATCCTCAGGCCTTGAAACGGATTATGGATCCTTAATTGATAGGAATTGGAAGAAAAAGCTTGAAGTTCAAGCTTC
AACTATGAGATTTTCTCTAATTCATTCGGCTTCTTTGAGAATAACAGGTTCAGCAGATTATTGCGGCAAAGATATTGCTGGAGCAAATTATTCCGAGATAGAAGGGTTTC
CGTTGGAATTTATTATTGTTACCGTTAGACTTAGCTTTAAATTCTCGCAGGGCAAATCCTTTCGGTTAGGATTCTTGTTTGCTGCAGCCCTATTTATTCGCAATCTCTGG
AATGCTGAGAAGGAACATGAAACAGATGTCGAAGGACAAGTCGCGGGTGTGCCTGAAAAAGAGAAAACACCGGAGCTGGTGCAGGAGGCCCATGTTGAAATTATTATGCC
TGAACCACCCAAGCGCTGCCGCATCAAGAGAAAGGCGGGTCGCGTGAGGATGGTTCGGAACACTCCATCACCTCCGACGTCGGACTCTGAGGAAGAAAGAAGGGAAGCTG
AGAATAAGGAAAAAGAAGAAGAGGCAAGAAAGGAAGAGGAAGAGCGTTTGCGTGTCCAGAGAGAAAGCAGGGGCAAAGGAATTGCCGAAGCATCAGGAGAAATTGAGGAG
CCGAGGGCGCCATTCATTCGCTTCGTCAATGATCTTGCTCGAGCAAAATACCAGGAGGTACTGAAACGGGACTTCTTGTTCGAACGTGGATTTGGCAGTGATTTGCCTAG
GTTCTTGGAGTCTGGAATAGTGAACCTTGGATGGAGGCAATTTTGTGCGAAACCAGAACCTGTCAATTCCAACATTGTTCGAGAATTTTATGCCAATCTTGACATTAAGA
ATGATTTTGAGGTCATCGTTCGAGGAGTGCCTGTACAGTGGAGTCCTGAGGCCATTAATGAACTGTTCGATCTCCAAGATTTCCGCATGCCGTTTTTAATGAGATGGTGG
CTGCACCATCTAGTGATCAACTGA
Protein sequenceShow/hide protein sequence
MDLGKPLGSSLLSSGLETDYGSLIDRNWKKKLEVQASTMRFSLIHSASLRITGSADYCGKDIAGANYSEIEGFPLEFIIVTVRLSFKFSQGKSFRLGFLFAAALFIRNLW
NAEKEHETDVEGQVAGVPEKEKTPELVQEAHVEIIMPEPPKRCRIKRKAGRVRMVRNTPSPPTSDSEEERREAENKEKEEEARKEEEERLRVQRESRGKGIAEASGEIEE
PRAPFIRFVNDLARAKYQEVLKRDFLFERGFGSDLPRFLESGIVNLGWRQFCAKPEPVNSNIVREFYANLDIKNDFEVIVRGVPVQWSPEAINELFDLQDFRMPFLMRWW
LHHLVIN