; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0032023 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032023
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGirdin-like
Genome locationchr11:22698402..22698827
RNA-Seq ExpressionLag0032023
SyntenyLag0032023
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036949.1 girdin-like [Cucumis melo var. makuwa]3.5e-1742.55Show/hide
Query:  MDQVTQASGKLEEVERVSKNRAKRERDYDILDEKNRRLIKENHALKNENTALRRATHSQEDIIKDLSRSKETLLDLVAELNETTNKQKTQLIEFEEANTA
        MD  T    KLE+ +   KN+ K E+D + LD++ RR+ K N +LKNE T  +    SQ++ IKDL   KE  L LV +LN +  K++T++++ E  N +
Subjt:  MDQVTQASGKLEEVERVSKNRAKRERDYDILDEKNRRLIKENHALKNENTALRRATHSQEDIIKDLSRSKETLLDLVAELNETTNKQKTQLIEFEEANTA

Query:  LRRTMDNLRVNMQAQSEESEALKGYASSLERQLQAFQRASE
        LR+T+D+L + M   SEE E LK YA SL  QL A Q +S+
Subjt:  LRRTMDNLRVNMQAQSEESEALKGYASSLERQLQAFQRASE

KAA0037780.1 girdin-like [Cucumis melo var. makuwa]3.9e-1644.7Show/hide
Query:  KLEEVERVSKNRAKRERDYDILDEKNRRLIKENHALKNENTALRRATHSQEDIIKDLSRSKETLLDLVAELNETTNKQKTQLIEFEEANTALRRTMDNLR
        +LE+ +   KN+ K E D   LD++ RR+ K N +LKNE T L+    SQ++ IKDL   KE  L+LV +LN +  K++TQ+++ E  N +LR+T+DNL 
Subjt:  KLEEVERVSKNRAKRERDYDILDEKNRRLIKENHALKNENTALRRATHSQEDIIKDLSRSKETLLDLVAELNETTNKQKTQLIEFEEANTALRRTMDNLR

Query:  VNMQAQSEESEALKGYASSLERQLQAFQRASE
        + M  +SEE E LK YA SL  QL A Q +S+
Subjt:  VNMQAQSEESEALKGYASSLERQLQAFQRASE

KAA0060422.1 girdin-like [Cucumis melo var. makuwa]4.6e-1742.86Show/hide
Query:  MDQVTQASGKLEEVERVSKNRAKRERDYDILDEKNRRLIKENHALKNENTALRRATHSQEDIIKDLSRSKETLLDLVAELNETTNKQKTQLIEFEEANTA
        MD  T    +LE+ +   KN+ K E+D + LD++ RR+ K N +LKNE T L+    SQ++ IKDL   KE  L+ V +LN +  K++TQ+++ E  N +
Subjt:  MDQVTQASGKLEEVERVSKNRAKRERDYDILDEKNRRLIKENHALKNENTALRRATHSQEDIIKDLSRSKETLLDLVAELNETTNKQKTQLIEFEEANTA

Query:  LRRTMDNLRVNMQAQSEESEALKGYASSLERQLQAFQRAS
        LR+T+D+L + M   SEE E LK YA SL  QL A Q +S
Subjt:  LRRTMDNLRVNMQAQSEESEALKGYASSLERQLQAFQRAS

KAA0062685.1 girdin-like [Cucumis melo var. makuwa]6.6e-1641.43Show/hide
Query:  MDQVTQASGKLEEVERVSKNRAKRERDYDILDEKNRRLIKENHALKNENTALRRATHSQEDIIKDLSRSKETLLDLVAELNETTNKQKTQLIEFEEANTA
        MD  T    +L++ +   KN+ K E+D + LD++ RR+ K N +LKNE T L+    SQ + IKDL   KE  L+ V +LN +  K++TQ+++ E  N +
Subjt:  MDQVTQASGKLEEVERVSKNRAKRERDYDILDEKNRRLIKENHALKNENTALRRATHSQEDIIKDLSRSKETLLDLVAELNETTNKQKTQLIEFEEANTA

Query:  LRRTMDNLRVNMQAQSEESEALKGYASSLERQLQAFQRAS
        LR+T+D+L + M   SEE E LK Y  SL  QL A Q +S
Subjt:  LRRTMDNLRVNMQAQSEESEALKGYASSLERQLQAFQRAS

XP_031738551.1 LOW QUALITY PROTEIN: uncharacterized protein LOC101203611 [Cucumis sativus]2.1e-1741.84Show/hide
Query:  MDQVTQASGKLEEVERVSKNRAKRERDYDILDEKNRRLIKENHALKNENTALRRATHSQEDIIKDLSRSKETLLDLVAELNETTNKQKTQLIEFEEANTA
        +D  T    +LE+ +   KN+ K E++ ++LDE+ RR+ K N +LKNE T L+    SQ++ IKDL   KE  L+LV +L  +  K++ Q+++ E  N +
Subjt:  MDQVTQASGKLEEVERVSKNRAKRERDYDILDEKNRRLIKENHALKNENTALRRATHSQEDIIKDLSRSKETLLDLVAELNETTNKQKTQLIEFEEANTA

Query:  LRRTMDNLRVNMQAQSEESEALKGYASSLERQLQAFQRASE
        LR+T+D+L V M   SE+ + LK YA SL  QL AFQ +SE
Subjt:  LRRTMDNLRVNMQAQSEESEALKGYASSLERQLQAFQRASE

TrEMBL top hitse value%identityAlignment
A0A5A7T6E2 Girdin-like1.7e-1742.55Show/hide
Query:  MDQVTQASGKLEEVERVSKNRAKRERDYDILDEKNRRLIKENHALKNENTALRRATHSQEDIIKDLSRSKETLLDLVAELNETTNKQKTQLIEFEEANTA
        MD  T    KLE+ +   KN+ K E+D + LD++ RR+ K N +LKNE T  +    SQ++ IKDL   KE  L LV +LN +  K++T++++ E  N +
Subjt:  MDQVTQASGKLEEVERVSKNRAKRERDYDILDEKNRRLIKENHALKNENTALRRATHSQEDIIKDLSRSKETLLDLVAELNETTNKQKTQLIEFEEANTA

Query:  LRRTMDNLRVNMQAQSEESEALKGYASSLERQLQAFQRASE
        LR+T+D+L + M   SEE E LK YA SL  QL A Q +S+
Subjt:  LRRTMDNLRVNMQAQSEESEALKGYASSLERQLQAFQRASE

A0A5A7UX37 Girdin-like2.2e-1742.86Show/hide
Query:  MDQVTQASGKLEEVERVSKNRAKRERDYDILDEKNRRLIKENHALKNENTALRRATHSQEDIIKDLSRSKETLLDLVAELNETTNKQKTQLIEFEEANTA
        MD  T    +LE+ +   KN+ K E+D + LD++ RR+ K N +LKNE T L+    SQ++ IKDL   KE  L+ V +LN +  K++TQ+++ E  N +
Subjt:  MDQVTQASGKLEEVERVSKNRAKRERDYDILDEKNRRLIKENHALKNENTALRRATHSQEDIIKDLSRSKETLLDLVAELNETTNKQKTQLIEFEEANTA

Query:  LRRTMDNLRVNMQAQSEESEALKGYASSLERQLQAFQRAS
        LR+T+D+L + M   SEE E LK YA SL  QL A Q +S
Subjt:  LRRTMDNLRVNMQAQSEESEALKGYASSLERQLQAFQRAS

A0A5A7V9X6 Girdin-like3.2e-1641.43Show/hide
Query:  MDQVTQASGKLEEVERVSKNRAKRERDYDILDEKNRRLIKENHALKNENTALRRATHSQEDIIKDLSRSKETLLDLVAELNETTNKQKTQLIEFEEANTA
        MD  T    +L++ +   KN+ K E+D + LD++ RR+ K N +LKNE T L+    SQ + IKDL   KE  L+ V +LN +  K++TQ+++ E  N +
Subjt:  MDQVTQASGKLEEVERVSKNRAKRERDYDILDEKNRRLIKENHALKNENTALRRATHSQEDIIKDLSRSKETLLDLVAELNETTNKQKTQLIEFEEANTA

Query:  LRRTMDNLRVNMQAQSEESEALKGYASSLERQLQAFQRAS
        LR+T+D+L + M   SEE E LK Y  SL  QL A Q +S
Subjt:  LRRTMDNLRVNMQAQSEESEALKGYASSLERQLQAFQRAS

A0A5D3D533 Girdin-like4.2e-1642.42Show/hide
Query:  KLEEVERVSKNRAKRERDYDILDEKNRRLIKENHALKNENTALRRATHSQEDIIKDLSRSKETLLDLVAELNETTNKQKTQLIEFEEANTALRRTMDNLR
        +LE+ +   KN+ K E+D +  D++ RR+ K N +LKNE T L+    S+++ IKDL   KE  L+LV +LN +  K++TQ+++ E  N +LR+T+DNL 
Subjt:  KLEEVERVSKNRAKRERDYDILDEKNRRLIKENHALKNENTALRRATHSQEDIIKDLSRSKETLLDLVAELNETTNKQKTQLIEFEEANTALRRTMDNLR

Query:  VNMQAQSEESEALKGYASSLERQLQAFQRASE
        + M  +SEE E LK Y  SL  QL A Q +S+
Subjt:  VNMQAQSEESEALKGYASSLERQLQAFQRASE

A0A5D3DUG2 Girdin-like1.9e-1644.7Show/hide
Query:  KLEEVERVSKNRAKRERDYDILDEKNRRLIKENHALKNENTALRRATHSQEDIIKDLSRSKETLLDLVAELNETTNKQKTQLIEFEEANTALRRTMDNLR
        +LE+ +   KN+ K E D   LD++ RR+ K N +LKNE T L+    SQ++ IKDL   KE  L+LV +LN +  K++TQ+++ E  N +LR+T+DNL 
Subjt:  KLEEVERVSKNRAKRERDYDILDEKNRRLIKENHALKNENTALRRATHSQEDIIKDLSRSKETLLDLVAELNETTNKQKTQLIEFEEANTALRRTMDNLR

Query:  VNMQAQSEESEALKGYASSLERQLQAFQRASE
        + M  +SEE E LK YA SL  QL A Q +S+
Subjt:  VNMQAQSEESEALKGYASSLERQLQAFQRASE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCAGGTAACTCAAGCTAGTGGCAAACTCGAAGAAGTAGAGAGAGTTTCAAAAAACCGAGCCAAGCGAGAAAGAGATTATGATATATTGGACGAGAAGAATAGAAG
GTTGATTAAGGAGAATCATGCTTTGAAGAATGAGAATACTGCATTACGAAGGGCAACTCATTCACAAGAGGACATAATCAAAGACCTTTCAAGAAGCAAAGAGACTCTCT
TAGATTTAGTTGCGGAATTAAACGAAACCACCAACAAGCAGAAAACGCAACTTATCGAGTTTGAAGAAGCCAATACTGCTCTAAGGCGAACGATGGACAATCTACGCGTG
AATATGCAGGCTCAATCAGAAGAGTCTGAAGCTTTAAAAGGTTATGCAAGCTCGTTAGAACGTCAGCTCCAAGCATTTCAAAGGGCAAGCGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGACCAGGTAACTCAAGCTAGTGGCAAACTCGAAGAAGTAGAGAGAGTTTCAAAAAACCGAGCCAAGCGAGAAAGAGATTATGATATATTGGACGAGAAGAATAGAAG
GTTGATTAAGGAGAATCATGCTTTGAAGAATGAGAATACTGCATTACGAAGGGCAACTCATTCACAAGAGGACATAATCAAAGACCTTTCAAGAAGCAAAGAGACTCTCT
TAGATTTAGTTGCGGAATTAAACGAAACCACCAACAAGCAGAAAACGCAACTTATCGAGTTTGAAGAAGCCAATACTGCTCTAAGGCGAACGATGGACAATCTACGCGTG
AATATGCAGGCTCAATCAGAAGAGTCTGAAGCTTTAAAAGGTTATGCAAGCTCGTTAGAACGTCAGCTCCAAGCATTTCAAAGGGCAAGCGAATAG
Protein sequenceShow/hide protein sequence
MDQVTQASGKLEEVERVSKNRAKRERDYDILDEKNRRLIKENHALKNENTALRRATHSQEDIIKDLSRSKETLLDLVAELNETTNKQKTQLIEFEEANTALRRTMDNLRV
NMQAQSEESEALKGYASSLERQLQAFQRASE