; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0032040 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032040
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationchr11:23085992..23086705
RNA-Seq ExpressionLag0032040
SyntenyLag0032040
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033232.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]2.0e-2462.77Show/hide
Query:  SHHTCSIDVVLTDHKQATFTFIKDCTKRKISIAASELPTPKGIISFIRSEYDLRISYEKAWHAREAALNEIRGSPEDSYKMILSFSHMLNINNP
        S HTCS+DV LTDH+ ATFT IKD  K KI +A SEL TPK I+ +IR+E+ L I Y+ AW AREAAL+EI GSPEDSYKMI  F ++L +N P
Subjt:  SHHTCSIDVVLTDHKQATFTFIKDCTKRKISIAASELPTPKGIISFIRSEYDLRISYEKAWHAREAALNEIRGSPEDSYKMILSFSHMLNINNP

KAA0058851.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]8.0e-2657.41Show/hide
Query:  SHHTCSIDVVLTDHKQATFTFIKDCTKRKISIAASELPTPKGIISFIRSEYDLRISYEKAWHAREAALNEIRGSPEDSYKMILSFSHMLNINNPELLSFF
        S HTCSIDV LTDH+ ATFT IKD  K KIS+  SEL TPK I+ FIR+E+DL ISY+KAW ARE AL++  GSPE+SYKM+  F+++L +NNP  +  +
Subjt:  SHHTCSIDVVLTDHKQATFTFIKDCTKRKISIAASELPTPKGIISFIRSEYDLRISYEKAWHAREAALNEIRGSPEDSYKMILSFSHMLNINNPELLSFF

Query:  LPSTDPNF
            D  F
Subjt:  LPSTDPNF

XP_008441658.1 PREDICTED: uncharacterized protein LOC103485740 [Cucumis melo]3.6e-2647.97Show/hide
Query:  SNSKPQNLIVIFWSCNVLLRIVSGSLEHVGSEMMVVPLGLSHHTCSIDVVLTDHKQATFTFIKDCTKRKISIAASELPTPKGIISFIRSEYDLRISYEKA
        SN +   L     +C   LR  S    H    + V+    S HTCSIDV LTDH+ ATFT IKD  K KIS+  SEL TPK I+ FIR+E+DL ISY+KA
Subjt:  SNSKPQNLIVIFWSCNVLLRIVSGSLEHVGSEMMVVPLGLSHHTCSIDVVLTDHKQATFTFIKDCTKRKISIAASELPTPKGIISFIRSEYDLRISYEKA

Query:  WHAREAALNEIRGSPEDSYKMILSFSHMLNINNPELLSFFLPSTDPNF
        W ARE AL++  GSPE+SYKM+  F+++L +NNP  +  +    D  F
Subjt:  WHAREAALNEIRGSPEDSYKMILSFSHMLNINNPELLSFFLPSTDPNF

XP_008450197.1 PREDICTED: uncharacterized protein LOC103491857 [Cucumis melo]6.8e-2561.7Show/hide
Query:  SHHTCSIDVVLTDHKQATFTFIKDCTKRKISIAASELPTPKGIISFIRSEYDLRISYEKAWHAREAALNEIRGSPEDSYKMILSFSHMLNINNP
        S HTCSID+ LTDH+QATFT IKD  + KIS+A SEL TPK I+ FIRSE+ L ISY+KAW A E AL++I  SP+DSYK++  F+++L +NNP
Subjt:  SHHTCSIDVVLTDHKQATFTFIKDCTKRKISIAASELPTPKGIISFIRSEYDLRISYEKAWHAREAALNEIRGSPEDSYKMILSFSHMLNINNP

XP_008464510.1 PREDICTED: protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo]7.5e-2461.96Show/hide
Query:  HTCSIDVVLTDHKQATFTFIKDCTKRKISIAASELPTPKGIISFIRSEYDLRISYEKAWHAREAALNEIRGSPEDSYKMILSFSHMLNINNP
        HTCS+DV LTDH+QATF  IKD  K KIS+A S+L TPK I+ FIR+E+ L ISY+KAW  REAAL++I  S EDSYKM+  F+++L +NNP
Subjt:  HTCSIDVVLTDHKQATFTFIKDCTKRKISIAASELPTPKGIISFIRSEYDLRISYEKAWHAREAALNEIRGSPEDSYKMILSFSHMLNINNP

TrEMBL top hitse value%identityAlignment
A0A1S3B4K4 uncharacterized protein LOC1034857401.7e-2647.97Show/hide
Query:  SNSKPQNLIVIFWSCNVLLRIVSGSLEHVGSEMMVVPLGLSHHTCSIDVVLTDHKQATFTFIKDCTKRKISIAASELPTPKGIISFIRSEYDLRISYEKA
        SN +   L     +C   LR  S    H    + V+    S HTCSIDV LTDH+ ATFT IKD  K KIS+  SEL TPK I+ FIR+E+DL ISY+KA
Subjt:  SNSKPQNLIVIFWSCNVLLRIVSGSLEHVGSEMMVVPLGLSHHTCSIDVVLTDHKQATFTFIKDCTKRKISIAASELPTPKGIISFIRSEYDLRISYEKA

Query:  WHAREAALNEIRGSPEDSYKMILSFSHMLNINNPELLSFFLPSTDPNF
        W ARE AL++  GSPE+SYKM+  F+++L +NNP  +  +    D  F
Subjt:  WHAREAALNEIRGSPEDSYKMILSFSHMLNINNPELLSFFLPSTDPNF

A0A1S3BN44 uncharacterized protein LOC1034918573.3e-2561.7Show/hide
Query:  SHHTCSIDVVLTDHKQATFTFIKDCTKRKISIAASELPTPKGIISFIRSEYDLRISYEKAWHAREAALNEIRGSPEDSYKMILSFSHMLNINNP
        S HTCSID+ LTDH+QATFT IKD  + KIS+A SEL TPK I+ FIRSE+ L ISY+KAW A E AL++I  SP+DSYK++  F+++L +NNP
Subjt:  SHHTCSIDVVLTDHKQATFTFIKDCTKRKISIAASELPTPKGIISFIRSEYDLRISYEKAWHAREAALNEIRGSPEDSYKMILSFSHMLNINNP

A0A1S3CLS8 protein FAR-RED ELONGATED HYPOCOTYL 3-like3.6e-2461.96Show/hide
Query:  HTCSIDVVLTDHKQATFTFIKDCTKRKISIAASELPTPKGIISFIRSEYDLRISYEKAWHAREAALNEIRGSPEDSYKMILSFSHMLNINNP
        HTCS+DV LTDH+QATF  IKD  K KIS+A S+L TPK I+ FIR+E+ L ISY+KAW  REAAL++I  S EDSYKM+  F+++L +NNP
Subjt:  HTCSIDVVLTDHKQATFTFIKDCTKRKISIAASELPTPKGIISFIRSEYDLRISYEKAWHAREAALNEIRGSPEDSYKMILSFSHMLNINNP

A0A5D3BGB6 Protein FAR-RED ELONGATED HYPOCOTYL 3-like9.5e-2562.77Show/hide
Query:  SHHTCSIDVVLTDHKQATFTFIKDCTKRKISIAASELPTPKGIISFIRSEYDLRISYEKAWHAREAALNEIRGSPEDSYKMILSFSHMLNINNP
        S HTCS+DV LTDH+ ATFT IKD  K KI +A SEL TPK I+ +IR+E+ L I Y+ AW AREAAL+EI GSPEDSYKMI  F ++L +N P
Subjt:  SHHTCSIDVVLTDHKQATFTFIKDCTKRKISIAASELPTPKGIISFIRSEYDLRISYEKAWHAREAALNEIRGSPEDSYKMILSFSHMLNINNP

A0A5D3DK39 Protein FAR-RED ELONGATED HYPOCOTYL 3-like3.9e-2657.41Show/hide
Query:  SHHTCSIDVVLTDHKQATFTFIKDCTKRKISIAASELPTPKGIISFIRSEYDLRISYEKAWHAREAALNEIRGSPEDSYKMILSFSHMLNINNPELLSFF
        S HTCSIDV LTDH+ ATFT IKD  K KIS+  SEL TPK I+ FIR+E+DL ISY+KAW ARE AL++  GSPE+SYKM+  F+++L +NNP  +  +
Subjt:  SHHTCSIDVVLTDHKQATFTFIKDCTKRKISIAASELPTPKGIISFIRSEYDLRISYEKAWHAREAALNEIRGSPEDSYKMILSFSHMLNINNPELLSFF

Query:  LPSTDPNF
            D  F
Subjt:  LPSTDPNF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATGTTCTCTTCCAAGATTACGTTACAGAATGCGATTCGATCTATTGCCATCAGAGACAACTTCCAATTCAAAACCGCAAAATTTAATCGTGATATTTTGGTCGTG
CAATGTGTTGTTGAGGATTGTGAGTGGTTCCTTAGAGCATGTCGGTTCGGAGATGATGGTAGTCCCACTTGGGTTGTCACATCATACATGCTCAATTGATGTTGTATTGA
CTGACCACAAGCAAGCGACATTTACCTTCATTAAGGATTGTACTAAGCGGAAGATTAGCATTGCTGCTAGTGAATTACCCACTCCTAAAGGCATTATATCTTTTATTCGA
TCAGAATATGACTTGCGTATTAGCTATGAAAAAGCTTGGCATGCTCGTGAAGCTGCATTAAATGAGATTAGAGGATCTCCAGAAGACTCATACAAAATGATCCTATCGTT
TTCCCATATGTTGAATATAAATAATCCAGAACTGTTATCCTTTTTCTTGCCCTCTACCGATCCAAACTTTGATGTGTATGGCGACCTCAAGATCATTGAAGGAACCACAA
CCCTACGTTCTCTATTTCGCAAGAACTCGTTTTTTGTAACAAATGGTCATGTCCCTTTCATCTGCAGTCATAATGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGACATGTTCTCTTCCAAGATTACGTTACAGAATGCGATTCGATCTATTGCCATCAGAGACAACTTCCAATTCAAAACCGCAAAATTTAATCGTGATATTTTGGTCGTG
CAATGTGTTGTTGAGGATTGTGAGTGGTTCCTTAGAGCATGTCGGTTCGGAGATGATGGTAGTCCCACTTGGGTTGTCACATCATACATGCTCAATTGATGTTGTATTGA
CTGACCACAAGCAAGCGACATTTACCTTCATTAAGGATTGTACTAAGCGGAAGATTAGCATTGCTGCTAGTGAATTACCCACTCCTAAAGGCATTATATCTTTTATTCGA
TCAGAATATGACTTGCGTATTAGCTATGAAAAAGCTTGGCATGCTCGTGAAGCTGCATTAAATGAGATTAGAGGATCTCCAGAAGACTCATACAAAATGATCCTATCGTT
TTCCCATATGTTGAATATAAATAATCCAGAACTGTTATCCTTTTTCTTGCCCTCTACCGATCCAAACTTTGATGTGTATGGCGACCTCAAGATCATTGAAGGAACCACAA
CCCTACGTTCTCTATTTCGCAAGAACTCGTTTTTTGTAACAAATGGTCATGTCCCTTTCATCTGCAGTCATAATGTATAA
Protein sequenceShow/hide protein sequence
MTCSLPRLRYRMRFDLLPSETTSNSKPQNLIVIFWSCNVLLRIVSGSLEHVGSEMMVVPLGLSHHTCSIDVVLTDHKQATFTFIKDCTKRKISIAASELPTPKGIISFIR
SEYDLRISYEKAWHAREAALNEIRGSPEDSYKMILSFSHMLNINNPELLSFFLPSTDPNFDVYGDLKIIEGTTTLRSLFRKNSFFVTNGHVPFICSHNV