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Lag0032057 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032057
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr11:23358380..23361063
RNA-Seq ExpressionLag0032057
SyntenyLag0032057
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAE1178059.1 unnamed protein product [Sepia pharaonis]2.7e-0435.09Show/hide
Query:  PSHLASGSDQPLIQAEFMMVSRLSHLASGSDQPLIQAEFRMVSRPSHLASGSDQPLIHAEFRMVSRPSHLASGSDQPLFQAEFRMVSCPRPSHLGSGSDQ
        P+HL S S    I       S   HL S S  P I         P HL S SD P I         P HL S    P     FR+   P PSHL S SD 
Subjt:  PSHLASGSDQPLIQAEFMMVSRLSHLASGSDQPLIQAEFRMVSRPSHLASGSDQPLIHAEFRMVSRPSHLASGSDQPLFQAEFRMVSCPRPSHLGSGSDQ

Query:  PLIQAEFRIITCPS
        P I         PS
Subjt:  PLIQAEFRIITCPS
CAE1322405.1 unnamed protein product [Sepia pharaonis]7.6e-0737.72Show/hide
Query:  PSHLASGSDQPLIQAEFMMVSRLSHLASGSDQPLIQAEFRMVSRPSHLASGSDQPLIHAEFRMVSRPSHLASGSDQPLFQAEFRMVSCPRPSHLGSGSDQ
        PSHL S S  P I          +HL S S  P I         PSHL S SD P I         P+HL S SD P     FR+   P PSHL S S  
Subjt:  PSHLASGSDQPLIQAEFMMVSRLSHLASGSDQPLIQAEFRMVSRPSHLASGSDQPLIHAEFRMVSRPSHLASGSDQPLFQAEFRMVSCPRPSHLGSGSDQ

Query:  PLIQAEFRIITCPS
        P I         PS
Subjt:  PLIQAEFRIITCPS
TrEMBL top hitse value%identityAlignment
A0A7S4AVG6 Hypothetical protein9.3e-1141.18Show/hide
Query:  EFRMVS--CPSHLA--SGSDQPLIQAEFMMVS--RLSHLASGSDQPLIQAEFRMVS--RPSHLASGSDQPLIHAEFRMVS--RPSHLASGSDQPLFQAEF
        EF  VS   PSH +  SG D PL++ EF  VS    SH  +G    L++ EF  VS   PSH  +G   PL+  EF  V+   PS+   G   PL + EF
Subjt:  EFRMVS--CPSHLA--SGSDQPLIQAEFMMVS--RLSHLASGSDQPLIQAEFRMVS--RPSHLASGSDQPLIHAEFRMVS--RPSHLASGSDQPLFQAEF

Query:  RMVSCPRPSHLGSGSDQPL
          VS P PSH  +G   PL
Subjt:  RMVSCPRPSHLGSGSDQPL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGGCCTACTAGGACTTGAGGATGATAAGAACCTTGTTCTTAGTTCTGTAGTTAAATCTGATGAGGATCTGAGCTTCAATCTTCGGTTTTGCAGAGGGAGCTTCAA
TCTTCAGTTTCTTCTACGAGCTTTCTCTTCTTCCTTGGAAGAGAACCTCTCTATTTATAGAGTTCTCGCTGGACGGACCCTGGCGGAATTCAGGATGGTCTCTTGCCCTT
CTCATCTTGCCTCAGGCAGTGATCAACCCCTGATTCAGGCGGAATTCATGATGGTCTCTCGCCTTTCACATCTTGCCTCAGGCAGTGATCAACCCCTGATTCAGGCAGAA
TTCAGGATGGTCTCTCGCCCTTCTCATCTTGCCTCAGGCAGTGATCAACCCCTGATTCATGCGGAATTCAGGATGGTCTCTCGCCCTTCACATCTTGCCTCAGGCAGTGA
TCAACCCCTGTTTCAGGCAGAATTCAGGATGGTCTCTTGCCCTCGTCCTTCACATCTTGGCTCAGGCAGTGATCAACCCCTGATTCAAGCGGAATTCAGGATAATCACTT
GTCCTTCTTGTACCGCCAACCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCGGCCTACTAGGACTTGAGGATGATAAGAACCTTGTTCTTAGTTCTGTAGTTAAATCTGATGAGGATCTGAGCTTCAATCTTCGGTTTTGCAGAGGGAGCTTCAA
TCTTCAGTTTCTTCTACGAGCTTTCTCTTCTTCCTTGGAAGAGAACCTCTCTATTTATAGAGTTCTCGCTGGACGGACCCTGGCGGAATTCAGGATGGTCTCTTGCCCTT
CTCATCTTGCCTCAGGCAGTGATCAACCCCTGATTCAGGCGGAATTCATGATGGTCTCTCGCCTTTCACATCTTGCCTCAGGCAGTGATCAACCCCTGATTCAGGCAGAA
TTCAGGATGGTCTCTCGCCCTTCTCATCTTGCCTCAGGCAGTGATCAACCCCTGATTCATGCGGAATTCAGGATGGTCTCTCGCCCTTCACATCTTGCCTCAGGCAGTGA
TCAACCCCTGTTTCAGGCAGAATTCAGGATGGTCTCTTGCCCTCGTCCTTCACATCTTGGCTCAGGCAGTGATCAACCCCTGATTCAAGCGGAATTCAGGATAATCACTT
GTCCTTCTTGTACCGCCAACCTTTGA
Protein sequenceShow/hide protein sequence
MVGLLGLEDDKNLVLSSVVKSDEDLSFNLRFCRGSFNLQFLLRAFSSSLEENLSIYRVLAGRTLAEFRMVSCPSHLASGSDQPLIQAEFMMVSRLSHLASGSDQPLIQAE
FRMVSRPSHLASGSDQPLIHAEFRMVSRPSHLASGSDQPLFQAEFRMVSCPRPSHLGSGSDQPLIQAEFRIITCPSCTANL