; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0032065 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032065
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr11:23528355..23530861
RNA-Seq ExpressionLag0032065
SyntenyLag0032065
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033257.1 hypothetical protein E6C27_scaffold845G00530 [Cucumis melo var. makuwa]2.2e-1728.8Show/hide
Query:  NPGSVTSLKVDDDGRFRYFFMALSACMVGNTVVQLSLLMGKHKSIAKSIQIVLPDISSAYAYFEFQMRQLEVDARGSKRVT-CYIYVGSSTNDATEMVNP
        NPGS T+ ++D +G F+Y FMA+++ +        + + G  K    +  IV  +  +++ +F  Q++    D  G   ++  +I +     D    VNP
Subjt:  NPGSVTSLKVDDDGRFRYFFMALSACMVGNTVVQLSLLMGKHKSIAKSIQIVLPDISSAYAYFEFQMRQLEVDARGSKRVT-CYIYVGSSTNDATEMVNP

Query:  VDNMQFQVIDGTSQYDVHLTTKRCICRMWDILEIPCSHACAVLTTKHVSIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWIIPE
        V  ++FQV+DG   + V L    C C  WD+ EIPC++A  V+ + +++   + S +Y +  LS+ Y GL+ P+ + + W + E
Subjt:  VDNMQFQVIDGTSQYDVHLTTKRCICRMWDILEIPCSHACAVLTTKHVSIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWIIPE

KAA0046918.1 uncharacterized protein E6C27_scaffold230G00860 [Cucumis melo var. makuwa]9.1e-1630.81Show/hide
Query:  NPGSVTSLKVDDDGRFRYFFMALSACMVG------NTVVQLSLLMGKHKS--IAKSIQIVLPDISSAYAYFEFQMR---QLEVDARGSKRVTCYIYVGSS
        NPGS T+ ++D +G F+Y FMA+++ + G      N  V  + L  K+    +  +    LP  S   A  EF  R   +    A   K V  Y   G  
Subjt:  NPGSVTSLKVDDDGRFRYFFMALSACMVG------NTVVQLSLLMGKHKS--IAKSIQIVLPDISSAYAYFEFQMR---QLEVDARGSKRVTCYIYVGSS

Query:  TNDATE----MVNPVDNMQFQVIDGTSQYDVHLTTKRCICRMWDILEIPCSHACAVLTTKHVSIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWIIPE
             E    +VNP+  ++FQV+DG   + V L    C C  WD+ EIPC+ A  V+ + +++   + S +Y +  LS+ Y GL+ P+G+ + W + E
Subjt:  TNDATE----MVNPVDNMQFQVIDGTSQYDVHLTTKRCICRMWDILEIPCSHACAVLTTKHVSIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWIIPE

KAA0062291.1 hypothetical protein E6C27_scaffold154G00320 [Cucumis melo var. makuwa]1.3e-1430.65Show/hide
Query:  NPGSVTSLKVDDDGRFRYFFMALSACMVG----NTVVQLSLLMGKHKSIAKSIQIVLPDISSAYAYFEFQMRQLEVDARGSKRVTCY---IYVGSSTNDA
        NPG+ T+L++DD G F++ FMA  A + G      ++ +     K+   +   +      S AY++     R+ +  +     +T +   I         
Subjt:  NPGSVTSLKVDDDGRFRYFFMALSACMVG----NTVVQLSLLMGKHKSIAKSIQIVLPDISSAYAYFEFQMRQLEVDARGSKRVTCY---IYVGSSTNDA

Query:  TEMVNPVDNMQFQVIDGTSQYDVHLTTKRCICRMWDILEIPCSHACAVLTTKHVSIKEYTSNFYLSKTLSSIYSGLIHPLGHESSW
          +V+P+   ++QV DG  Q+ V L    C CR+WDI EIPC+HA AVL   ++    Y S FY  +TLS+ Y+G   P+G    W
Subjt:  TEMVNPVDNMQFQVIDGTSQYDVHLTTKRCICRMWDILEIPCSHACAVLTTKHVSIKEYTSNFYLSKTLSSIYSGLIHPLGHESSW

TYK07957.1 hypothetical protein E5676_scaffold265G00780 [Cucumis melo var. makuwa]1.6e-2031.25Show/hide
Query:  NPGSVTSLKVDDDGRFRYFFMALSACMVGNTVVQLSLLMGKHKSIAKSIQIVLPDI---------------------------SSAYAY----FEFQMRQ
        NPG+ T+L++DD G F++ FMA  A            + G H SI K +  V PD+                           S AYAY    FE+ MR 
Subjt:  NPGSVTSLKVDDDGRFRYFFMALSACMVGNTVVQLSLLMGKHKSIAKSIQIVLPDI---------------------------SSAYAY----FEFQMRQ

Query:  LEVDARGSKRVTCYIYVGSSTNDATEMVNPVDNMQFQVIDGTSQYDVHLTTKRCICRMWDILEIPCSHACAVLTTKHVSIKEYTSNFYLSKTLSSIYSGL
        +E      K      Y+ S   +    V+P+   ++QV +G  Q+ V L  + C CR+WD+ EIPC+HA  VL   ++    Y S FY  +TLS  Y+G 
Subjt:  LEVDARGSKRVTCYIYVGSSTNDATEMVNPVDNMQFQVIDGTSQYDVHLTTKRCICRMWDILEIPCSHACAVLTTKHVSIKEYTSNFYLSKTLSSIYSGL

Query:  IHPLGHESSWIIPEEIELLTVSPP
        I P+G    W + + +  + + PP
Subjt:  IHPLGHESSWIIPEEIELLTVSPP

XP_022155207.1 uncharacterized protein LOC111022347 [Momordica charantia]2.9e-1428.93Show/hide
Query:  MLNLKNPGSVTSLKVDDDGRFRYFFMALSACMVGNTVVQ-----------LSLLMGKHKSIAKSIQIVLPDISSAYAYFEFQMRQLEVDARGSKRVTCYI
        M+ +KNPGSV   KVD+ GRF Y FMALS+ + G    +           L  +  +HKSI KS + V          F       E+   G  + + Y 
Subjt:  MLNLKNPGSVTSLKVDDDGRFRYFFMALSACMVGNTVVQ-----------LSLLMGKHKSIAKSIQIVLPDISSAYAYFEFQMRQLEVDARGSKRVTCYI

Query:  YVGSS-----TNDATEMVN---------PVDNM-------------------QFQVIDGTSQYDVHLTTKRCICRMWDILEIPCSHACAVLTTKHVSIKE
        Y  SS     T + ++ +N         P+ +M                    FQ+   T   +  L+ +   CR   +  +        +  KH+  K 
Subjt:  YVGSS-----TNDATEMVN---------PVDNM-------------------QFQVIDGTSQYDVHLTTKRCICRMWDILEIPCSHACAVLTTKHVSIKE

Query:  YTSNFYLSKTLSSIYSGLIHPLGHESSWIIPEEIELLTVSPP
        Y S++Y +  LSS YSG IHPLGH+SSW IPE+++++ +  P
Subjt:  YTSNFYLSKTLSSIYSGLIHPLGHESSWIIPEEIELLTVSPP

TrEMBL top hitse value%identityAlignment
A0A5A7SVB1 ZnF_PMZ domain-containing protein1.0e-1728.8Show/hide
Query:  NPGSVTSLKVDDDGRFRYFFMALSACMVGNTVVQLSLLMGKHKSIAKSIQIVLPDISSAYAYFEFQMRQLEVDARGSKRVT-CYIYVGSSTNDATEMVNP
        NPGS T+ ++D +G F+Y FMA+++ +        + + G  K    +  IV  +  +++ +F  Q++    D  G   ++  +I +     D    VNP
Subjt:  NPGSVTSLKVDDDGRFRYFFMALSACMVGNTVVQLSLLMGKHKSIAKSIQIVLPDISSAYAYFEFQMRQLEVDARGSKRVT-CYIYVGSSTNDATEMVNP

Query:  VDNMQFQVIDGTSQYDVHLTTKRCICRMWDILEIPCSHACAVLTTKHVSIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWIIPE
        V  ++FQV+DG   + V L    C C  WD+ EIPC++A  V+ + +++   + S +Y +  LS+ Y GL+ P+ + + W + E
Subjt:  VDNMQFQVIDGTSQYDVHLTTKRCICRMWDILEIPCSHACAVLTTKHVSIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWIIPE

A0A5A7TVL2 ZnF_PMZ domain-containing protein4.4e-1630.81Show/hide
Query:  NPGSVTSLKVDDDGRFRYFFMALSACMVG------NTVVQLSLLMGKHKS--IAKSIQIVLPDISSAYAYFEFQMR---QLEVDARGSKRVTCYIYVGSS
        NPGS T+ ++D +G F+Y FMA+++ + G      N  V  + L  K+    +  +    LP  S   A  EF  R   +    A   K V  Y   G  
Subjt:  NPGSVTSLKVDDDGRFRYFFMALSACMVG------NTVVQLSLLMGKHKS--IAKSIQIVLPDISSAYAYFEFQMR---QLEVDARGSKRVTCYIYVGSS

Query:  TNDATE----MVNPVDNMQFQVIDGTSQYDVHLTTKRCICRMWDILEIPCSHACAVLTTKHVSIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWIIPE
             E    +VNP+  ++FQV+DG   + V L    C C  WD+ EIPC+ A  V+ + +++   + S +Y +  LS+ Y GL+ P+G+ + W + E
Subjt:  TNDATE----MVNPVDNMQFQVIDGTSQYDVHLTTKRCICRMWDILEIPCSHACAVLTTKHVSIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWIIPE

A0A5A7V9D5 SWIM-type domain-containing protein6.3e-1530.65Show/hide
Query:  NPGSVTSLKVDDDGRFRYFFMALSACMVG----NTVVQLSLLMGKHKSIAKSIQIVLPDISSAYAYFEFQMRQLEVDARGSKRVTCY---IYVGSSTNDA
        NPG+ T+L++DD G F++ FMA  A + G      ++ +     K+   +   +      S AY++     R+ +  +     +T +   I         
Subjt:  NPGSVTSLKVDDDGRFRYFFMALSACMVG----NTVVQLSLLMGKHKSIAKSIQIVLPDISSAYAYFEFQMRQLEVDARGSKRVTCY---IYVGSSTNDA

Query:  TEMVNPVDNMQFQVIDGTSQYDVHLTTKRCICRMWDILEIPCSHACAVLTTKHVSIKEYTSNFYLSKTLSSIYSGLIHPLGHESSW
          +V+P+   ++QV DG  Q+ V L    C CR+WDI EIPC+HA AVL   ++    Y S FY  +TLS+ Y+G   P+G    W
Subjt:  TEMVNPVDNMQFQVIDGTSQYDVHLTTKRCICRMWDILEIPCSHACAVLTTKHVSIKEYTSNFYLSKTLSSIYSGLIHPLGHESSW

A0A5D3C7L7 Uncharacterized protein7.7e-2131.25Show/hide
Query:  NPGSVTSLKVDDDGRFRYFFMALSACMVGNTVVQLSLLMGKHKSIAKSIQIVLPDI---------------------------SSAYAY----FEFQMRQ
        NPG+ T+L++DD G F++ FMA  A            + G H SI K +  V PD+                           S AYAY    FE+ MR 
Subjt:  NPGSVTSLKVDDDGRFRYFFMALSACMVGNTVVQLSLLMGKHKSIAKSIQIVLPDI---------------------------SSAYAY----FEFQMRQ

Query:  LEVDARGSKRVTCYIYVGSSTNDATEMVNPVDNMQFQVIDGTSQYDVHLTTKRCICRMWDILEIPCSHACAVLTTKHVSIKEYTSNFYLSKTLSSIYSGL
        +E      K      Y+ S   +    V+P+   ++QV +G  Q+ V L  + C CR+WD+ EIPC+HA  VL   ++    Y S FY  +TLS  Y+G 
Subjt:  LEVDARGSKRVTCYIYVGSSTNDATEMVNPVDNMQFQVIDGTSQYDVHLTTKRCICRMWDILEIPCSHACAVLTTKHVSIKEYTSNFYLSKTLSSIYSGL

Query:  IHPLGHESSWIIPEEIELLTVSPP
        I P+G    W + + +  + + PP
Subjt:  IHPLGHESSWIIPEEIELLTVSPP

A0A6J1DNQ8 uncharacterized protein LOC1110223471.4e-1428.93Show/hide
Query:  MLNLKNPGSVTSLKVDDDGRFRYFFMALSACMVGNTVVQ-----------LSLLMGKHKSIAKSIQIVLPDISSAYAYFEFQMRQLEVDARGSKRVTCYI
        M+ +KNPGSV   KVD+ GRF Y FMALS+ + G    +           L  +  +HKSI KS + V          F       E+   G  + + Y 
Subjt:  MLNLKNPGSVTSLKVDDDGRFRYFFMALSACMVGNTVVQ-----------LSLLMGKHKSIAKSIQIVLPDISSAYAYFEFQMRQLEVDARGSKRVTCYI

Query:  YVGSS-----TNDATEMVN---------PVDNM-------------------QFQVIDGTSQYDVHLTTKRCICRMWDILEIPCSHACAVLTTKHVSIKE
        Y  SS     T + ++ +N         P+ +M                    FQ+   T   +  L+ +   CR   +  +        +  KH+  K 
Subjt:  YVGSS-----TNDATEMVN---------PVDNM-------------------QFQVIDGTSQYDVHLTTKRCICRMWDILEIPCSHACAVLTTKHVSIKE

Query:  YTSNFYLSKTLSSIYSGLIHPLGHESSWIIPEEIELLTVSPP
        Y S++Y +  LSS YSG IHPLGH+SSW IPE+++++ +  P
Subjt:  YTSNFYLSKTLSSIYSGLIHPLGHESSWIIPEEIELLTVSPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGAATTTAAAGAACCCAGGTTCGGTTACTAGTCTTAAAGTAGACGATGATGGAAGGTTTCGTTATTTCTTCATGGCCTTATCAGCCTGTATGGTTGGCAACACTGT
CGTCCAATTATCTCTGTTGATGGGCAAGCACAAGAGTATTGCAAAATCAATTCAGATAGTTCTTCCTGACATTTCCTCTGCATATGCATATTTTGAATTTCAGATGCGTC
AGTTGGAGGTAGATGCTCGAGGAAGCAAGAGAGTTACCTGTTACATCTATGTTGGAAGTTCTACGAATGATGCTACAGAGATGGTAAACCCAGTTGACAATATGCAATTT
CAAGTGATCGATGGGACGAGTCAATATGATGTTCACTTAACAACCAAGAGGTGTATTTGTCGGATGTGGGACATCTTGGAAATTCCGTGTTCCCATGCATGCGCTGTATT
GACAACTAAGCACGTATCCATCAAGGAGTATACATCAAACTTCTACCTTAGCAAGACTCTATCTTCTATATACAGTGGTTTAATTCATCCATTAGGGCATGAGTCTAGCT
GGATTATTCCGGAAGAGATTGAGTTGCTCACTGTTTCGCCGCCACCGCTCACCACATCGTCGCCGCCATTGAAGACCTACGCCGCCGCCACTCCGACGAACTCCGCCATT
AACCCAATCTCGATCCGACGTCCGCCGTCACCGCGAACTCCAACCATCCGAAGAACCAGGAGTAACTCTGACCCACATTCCAGTGAATTTCCATGGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGAATTTAAAGAACCCAGGTTCGGTTACTAGTCTTAAAGTAGACGATGATGGAAGGTTTCGTTATTTCTTCATGGCCTTATCAGCCTGTATGGTTGGCAACACTGT
CGTCCAATTATCTCTGTTGATGGGCAAGCACAAGAGTATTGCAAAATCAATTCAGATAGTTCTTCCTGACATTTCCTCTGCATATGCATATTTTGAATTTCAGATGCGTC
AGTTGGAGGTAGATGCTCGAGGAAGCAAGAGAGTTACCTGTTACATCTATGTTGGAAGTTCTACGAATGATGCTACAGAGATGGTAAACCCAGTTGACAATATGCAATTT
CAAGTGATCGATGGGACGAGTCAATATGATGTTCACTTAACAACCAAGAGGTGTATTTGTCGGATGTGGGACATCTTGGAAATTCCGTGTTCCCATGCATGCGCTGTATT
GACAACTAAGCACGTATCCATCAAGGAGTATACATCAAACTTCTACCTTAGCAAGACTCTATCTTCTATATACAGTGGTTTAATTCATCCATTAGGGCATGAGTCTAGCT
GGATTATTCCGGAAGAGATTGAGTTGCTCACTGTTTCGCCGCCACCGCTCACCACATCGTCGCCGCCATTGAAGACCTACGCCGCCGCCACTCCGACGAACTCCGCCATT
AACCCAATCTCGATCCGACGTCCGCCGTCACCGCGAACTCCAACCATCCGAAGAACCAGGAGTAACTCTGACCCACATTCCAGTGAATTTCCATGGAATTGA
Protein sequenceShow/hide protein sequence
MLNLKNPGSVTSLKVDDDGRFRYFFMALSACMVGNTVVQLSLLMGKHKSIAKSIQIVLPDISSAYAYFEFQMRQLEVDARGSKRVTCYIYVGSSTNDATEMVNPVDNMQF
QVIDGTSQYDVHLTTKRCICRMWDILEIPCSHACAVLTTKHVSIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWIIPEEIELLTVSPPPLTTSSPPLKTYAAATPTNSAI
NPISIRRPPSPRTPTIRRTRSNSDPHSSEFPWN