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Lag0032066 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032066
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein RAE1
Genome locationchr11:23542901..23543670
RNA-Seq ExpressionLag0032066
SyntenyLag0032066
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AQK42976.1 Protein RAE1 [Zea mays]2.2e-0747.78Show/hide
Query:  PIQNGIHPMPTQREVSPKLNVHQGDF--GEILMTANVIQLGQDVKQLEMLSGVLSH------AKYCPLLPPPRSTIATAFNPDGRTLAST
        PI+N  H + TQREVSP+L  H             + I+L     +L++ S   S       AKYCPLLPPPRSTIA AF+PDG+TLAST
Subjt:  PIQNGIHPMPTQREVSPKLNVHQGDF--GEILMTANVIQLGQDVKQLEMLSGVLSH------AKYCPLLPPPRSTIATAFNPDGRTLAST

AQK42994.1 Protein RAE1 [Zea mays]2.2e-0747.78Show/hide
Query:  PIQNGIHPMPTQREVSPKLNVHQGDF--GEILMTANVIQLGQDVKQLEMLSGVLSH------AKYCPLLPPPRSTIATAFNPDGRTLAST
        PI+N  H + TQREVSP+L  H             + I+L     +L++ S   S       AKYCPLLPPPRSTIA AF+PDG+TLAST
Subjt:  PIQNGIHPMPTQREVSPKLNVHQGDF--GEILMTANVIQLGQDVKQLEMLSGVLSH------AKYCPLLPPPRSTIATAFNPDGRTLAST

AQK42999.1 Protein RAE1 [Zea mays]2.2e-0747.78Show/hide
Query:  PIQNGIHPMPTQREVSPKLNVHQGDF--GEILMTANVIQLGQDVKQLEMLSGVLSH------AKYCPLLPPPRSTIATAFNPDGRTLAST
        PI+N  H + TQREVSP+L  H             + I+L     +L++ S   S       AKYCPLLPPPRSTIA AF+PDG+TLAST
Subjt:  PIQNGIHPMPTQREVSPKLNVHQGDF--GEILMTANVIQLGQDVKQLEMLSGVLSH------AKYCPLLPPPRSTIATAFNPDGRTLAST

AQK43008.1 Protein RAE1 [Zea mays]2.2e-0747.78Show/hide
Query:  PIQNGIHPMPTQREVSPKLNVHQGDF--GEILMTANVIQLGQDVKQLEMLSGVLSH------AKYCPLLPPPRSTIATAFNPDGRTLAST
        PI+N  H + TQREVSP+L  H             + I+L     +L++ S   S       AKYCPLLPPPRSTIA AF+PDG+TLAST
Subjt:  PIQNGIHPMPTQREVSPKLNVHQGDF--GEILMTANVIQLGQDVKQLEMLSGVLSH------AKYCPLLPPPRSTIATAFNPDGRTLAST

AQK43012.1 Protein RAE1 [Zea mays]2.2e-0747.78Show/hide
Query:  PIQNGIHPMPTQREVSPKLNVHQGDF--GEILMTANVIQLGQDVKQLEMLSGVLSH------AKYCPLLPPPRSTIATAFNPDGRTLAST
        PI+N  H + TQREVSP+L  H             + I+L     +L++ S   S       AKYCPLLPPPRSTIA AF+PDG+TLAST
Subjt:  PIQNGIHPMPTQREVSPKLNVHQGDF--GEILMTANVIQLGQDVKQLEMLSGVLSH------AKYCPLLPPPRSTIATAFNPDGRTLAST

TrEMBL top hitse value%identityAlignment
A0A1D6J4W8 Protein RAE11.1e-0747.78Show/hide
Query:  PIQNGIHPMPTQREVSPKLNVHQGDF--GEILMTANVIQLGQDVKQLEMLSGVLSH------AKYCPLLPPPRSTIATAFNPDGRTLAST
        PI+N  H + TQREVSP+L  H             + I+L     +L++ S   S       AKYCPLLPPPRSTIA AF+PDG+TLAST
Subjt:  PIQNGIHPMPTQREVSPKLNVHQGDF--GEILMTANVIQLGQDVKQLEMLSGVLSH------AKYCPLLPPPRSTIATAFNPDGRTLAST

A0A1D6J4X1 Protein RAE11.1e-0747.78Show/hide
Query:  PIQNGIHPMPTQREVSPKLNVHQGDF--GEILMTANVIQLGQDVKQLEMLSGVLSH------AKYCPLLPPPRSTIATAFNPDGRTLAST
        PI+N  H + TQREVSP+L  H             + I+L     +L++ S   S       AKYCPLLPPPRSTIA AF+PDG+TLAST
Subjt:  PIQNGIHPMPTQREVSPKLNVHQGDF--GEILMTANVIQLGQDVKQLEMLSGVLSH------AKYCPLLPPPRSTIATAFNPDGRTLAST

A0A1D6J4Y6 Protein RAE11.1e-0747.78Show/hide
Query:  PIQNGIHPMPTQREVSPKLNVHQGDF--GEILMTANVIQLGQDVKQLEMLSGVLSH------AKYCPLLPPPRSTIATAFNPDGRTLAST
        PI+N  H + TQREVSP+L  H             + I+L     +L++ S   S       AKYCPLLPPPRSTIA AF+PDG+TLAST
Subjt:  PIQNGIHPMPTQREVSPKLNVHQGDF--GEILMTANVIQLGQDVKQLEMLSGVLSH------AKYCPLLPPPRSTIATAFNPDGRTLAST

A0A1D6J4Z4 Protein RAE11.1e-0747.78Show/hide
Query:  PIQNGIHPMPTQREVSPKLNVHQGDF--GEILMTANVIQLGQDVKQLEMLSGVLSH------AKYCPLLPPPRSTIATAFNPDGRTLAST
        PI+N  H + TQREVSP+L  H             + I+L     +L++ S   S       AKYCPLLPPPRSTIA AF+PDG+TLAST
Subjt:  PIQNGIHPMPTQREVSPKLNVHQGDF--GEILMTANVIQLGQDVKQLEMLSGVLSH------AKYCPLLPPPRSTIATAFNPDGRTLAST

A0A1D6J4Z6 Protein RAE11.1e-0747.78Show/hide
Query:  PIQNGIHPMPTQREVSPKLNVHQGDF--GEILMTANVIQLGQDVKQLEMLSGVLSH------AKYCPLLPPPRSTIATAFNPDGRTLAST
        PI+N  H + TQREVSP+L  H             + I+L     +L++ S   S       AKYCPLLPPPRSTIA AF+PDG+TLAST
Subjt:  PIQNGIHPMPTQREVSPKLNVHQGDF--GEILMTANVIQLGQDVKQLEMLSGVLSH------AKYCPLLPPPRSTIATAFNPDGRTLAST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04140.1 Transducin family protein / WD-40 repeat family protein1.1e-0740Show/hide
Query:  MPPNVPLAPIQ----NGIHPMPTQREVSPKLN-VHQGDFGEILMTANVI--QLGQDVKQ--LEMLSGV----LSH--AKYCPLLPPPRSTIATAFNPDGR
        +P   P+A +       +  +  QRE+SP    V +  +GE    A+       + V++  L ++S V    L H  AKYCPL+PPPRSTIA AF+ DGR
Subjt:  MPPNVPLAPIQ----NGIHPMPTQREVSPKLN-VHQGDFGEILMTANVI--QLGQDVKQ--LEMLSGV----LSH--AKYCPLLPPPRSTIATAFNPDGR

Query:  TLAST
        TLAST
Subjt:  TLAST

AT1G04140.2 Transducin family protein / WD-40 repeat family protein1.1e-0740Show/hide
Query:  MPPNVPLAPIQ----NGIHPMPTQREVSPKLN-VHQGDFGEILMTANVI--QLGQDVKQ--LEMLSGV----LSH--AKYCPLLPPPRSTIATAFNPDGR
        +P   P+A +       +  +  QRE+SP    V +  +GE    A+       + V++  L ++S V    L H  AKYCPL+PPPRSTIA AF+ DGR
Subjt:  MPPNVPLAPIQ----NGIHPMPTQREVSPKLN-VHQGDFGEILMTANVI--QLGQDVKQ--LEMLSGV----LSH--AKYCPLLPPPRSTIATAFNPDGR

Query:  TLAST
        TLAST
Subjt:  TLAST

AT5G43930.1 Transducin family protein / WD-40 repeat family protein2.6e-0682.14Show/hide
Query:  AKYCPLLPPPRSTIATAFNPDGRTLAST
        AKYCPL  PPRSTIA AF+ DGRTLAST
Subjt:  AKYCPLLPPPRSTIATAFNPDGRTLAST

AT5G43930.2 Transducin family protein / WD-40 repeat family protein2.6e-0682.14Show/hide
Query:  AKYCPLLPPPRSTIATAFNPDGRTLAST
        AKYCPL  PPRSTIA AF+ DGRTLAST
Subjt:  AKYCPLLPPPRSTIATAFNPDGRTLAST

AT5G43930.3 Transducin family protein / WD-40 repeat family protein2.6e-0682.14Show/hide
Query:  AKYCPLLPPPRSTIATAFNPDGRTLAST
        AKYCPL  PPRSTIA AF+ DGRTLAST
Subjt:  AKYCPLLPPPRSTIATAFNPDGRTLAST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTATCCAATGCCTCCCAATGTTCCGTTGGCACCTATACAGAATGGGATTCACCCTATGCCTACCCAGAGAGAGGTTTCTCCGAAACTAAACGTGCATCAAGGGGA
TTTTGGGGAGATTCTCATGACCGCCAATGTGATTCAGTTGGGCCAAGATGTGAAGCAGCTAGAGATGCTAAGCGGGGTCTTATCTCATGCTAAATATTGCCCTCTTTTGC
CTCCTCCAAGGTCGACAATTGCAACAGCATTCAACCCTGATGGGAGAACGCTTGCTTCAACTCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTATCCAATGCCTCCCAATGTTCCGTTGGCACCTATACAGAATGGGATTCACCCTATGCCTACCCAGAGAGAGGTTTCTCCGAAACTAAACGTGCATCAAGGGGA
TTTTGGGGAGATTCTCATGACCGCCAATGTGATTCAGTTGGGCCAAGATGTGAAGCAGCTAGAGATGCTAAGCGGGGTCTTATCTCATGCTAAATATTGCCCTCTTTTGC
CTCCTCCAAGGTCGACAATTGCAACAGCATTCAACCCTGATGGGAGAACGCTTGCTTCAACTCAATGA
Protein sequenceShow/hide protein sequence
MKYPMPPNVPLAPIQNGIHPMPTQREVSPKLNVHQGDFGEILMTANVIQLGQDVKQLEMLSGVLSHAKYCPLLPPPRSTIATAFNPDGRTLASTQ