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Lag0032068 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032068
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationchr11:23557647..23560084
RNA-Seq ExpressionLag0032068
SyntenyLag0032068
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN68165.1 hypothetical protein VITISV_008538 [Vitis vinifera]7.5e-0934.59Show/hide
Query:  PSGWATLASVGIHAVSP-NEIHLVPESSSKSGKTRK-TDGGLGGKVKWSLVKETISPEKHDIV---------CG---LGG--------FAVLESVAMSGG
        PS   T  S  + A SP  E  +   S  K  K       GLG + K  +VK+ +  EK DIV         C    +G         +AVL +   SGG
Subjt:  PSGWATLASVGIHAVSP-NEIHLVPESSSKSGKTRK-TDGGLGGKVKWSLVKETISPEKHDIV---------CG---LGG--------FAVLESVAMSGG

Query:  IVVLWDSGLVTPVEVIKGQLSMSISFRLKDDEIRWVSGVYGPPRPKGRSAFWEELGDLF
        I+V+WDS  +   EV+ G  S+S+ F +   E  W+S VYGP     R  FW EL D+F
Subjt:  IVVLWDSGLVTPVEVIKGQLSMSISFRLKDDEIRWVSGVYGPPRPKGRSAFWEELGDLF

CAN74319.1 hypothetical protein VITISV_035345 [Vitis vinifera]5.7e-0937.82Show/hide
Query:  GLGGKVKWSLVKETISPEKHDIV---------CG---LGG--------FAVLESVAMSGGIVVLWDSGLVTPVEVIKGQLSMSISFRLKDDEIRWVSGVY
        GLG + K  +VK+ +  EK DIV         C    +G         +AVL +   SGGI+V+WDS  +   EV+ G  S+S+ F +   E  W+S VY
Subjt:  GLGGKVKWSLVKETISPEKHDIV---------CG---LGG--------FAVLESVAMSGGIVVLWDSGLVTPVEVIKGQLSMSISFRLKDDEIRWVSGVY

Query:  GPPRPKGRSAFWEELGDLF
        GP     R  FWEEL D+F
Subjt:  GPPRPKGRSAFWEELGDLF

RVW75035.1 hypothetical protein CK203_053703 [Vitis vinifera]5.7e-0934.72Show/hide
Query:  VPESSSKSGKTRKTD-GGLGGKVKWSLVKETISPEKHDIV---------CG---LGG--------FAVLESVAMSGGIVVLWDSGLVTPVEVIKGQLSMS
        VPE  S S +  + +  GLG K K  +VK+ +S EK D+V         C    +G         +A L +   SGGI+++WDS  +   EV+ G  S+S
Subjt:  VPESSSKSGKTRKTD-GGLGGKVKWSLVKETISPEKHDIV---------CG---LGG--------FAVLESVAMSGGIVVLWDSGLVTPVEVIKGQLSMS

Query:  ISFRLKDDEIRWVSGVYGPPRPKGRSAFWEELGDLFAFVALAGV
        I F +   E  W+S VYGP     R  FW EL D+   +   GV
Subjt:  ISFRLKDDEIRWVSGVYGPPRPKGRSAFWEELGDLFAFVALAGV

XP_028075126.1 uncharacterized protein LOC114277426 [Camellia sinensis]8.0e-1149.3Show/hide
Query:  FAVLESVAMSGGIVVLWDSGLVTPVEVIKGQLSMSISFRLKDDEIRWVSGVYGPPRPKGRSAFWEELGDLF
        +AVL S   SGGI+++WD  +V+  EV+ G  S+SI FR +D++  W++GVYGP RP  R  +W+ELG LF
Subjt:  FAVLESVAMSGGIVVLWDSGLVTPVEVIKGQLSMSISFRLKDDEIRWVSGVYGPPRPKGRSAFWEELGDLF

XP_028093340.1 uncharacterized protein LOC114293463 [Camellia sinensis]8.0e-1146.48Show/hide
Query:  FAVLESVAMSGGIVVLWDSGLVTPVEVIKGQLSMSISFRLKDDEIRWVSGVYGPPRPKGRSAFWEELGDLF
        +AVL S   SGGI+++WD  +V+  EV+ G  S+SI+FR +D+++ W++GVYGP +P  R  +W+EL  LF
Subjt:  FAVLESVAMSGGIVVLWDSGLVTPVEVIKGQLSMSISFRLKDDEIRWVSGVYGPPRPKGRSAFWEELGDLF

TrEMBL top hitse value%identityAlignment
A0A0A0LY03 Uncharacterized protein1.1e-1037.39Show/hide
Query:  GKVKWSLVKETISPEKHDIVCGLG--------------------GFAVLESVAMSGGIVVLWDSGLVTPVEVIKGQLSMSISFRLKDDEIRWVSGVYGPP
        G+ K  LVKE +  E  D+V  +                      + VLE+  +S GI+ LW+  L   +EV+ G+ S++I+F   D E  W+ GVYGPP
Subjt:  GKVKWSLVKETISPEKHDIVCGLG--------------------GFAVLESVAMSGGIVVLWDSGLVTPVEVIKGQLSMSISFRLKDDEIRWVSGVYGPP

Query:  RPKGRSAFWEELGDL
        R  GR+ FWEEL DL
Subjt:  RPKGRSAFWEELGDL

A0A438GS66 Uncharacterized protein2.8e-0934.72Show/hide
Query:  VPESSSKSGKTRKTD-GGLGGKVKWSLVKETISPEKHDIV---------CG---LGG--------FAVLESVAMSGGIVVLWDSGLVTPVEVIKGQLSMS
        VPE  S S +  + +  GLG K K  +VK+ +S EK D+V         C    +G         +A L +   SGGI+++WDS  +   EV+ G  S+S
Subjt:  VPESSSKSGKTRKTD-GGLGGKVKWSLVKETISPEKHDIV---------CG---LGG--------FAVLESVAMSGGIVVLWDSGLVTPVEVIKGQLSMS

Query:  ISFRLKDDEIRWVSGVYGPPRPKGRSAFWEELGDLFAFVALAGV
        I F +   E  W+S VYGP     R  FW EL D+   +   GV
Subjt:  ISFRLKDDEIRWVSGVYGPPRPKGRSAFWEELGDLFAFVALAGV

A5B9F0 Reverse transcriptase domain-containing protein2.8e-0937.82Show/hide
Query:  GLGGKVKWSLVKETISPEKHDIV---------CG---LGG--------FAVLESVAMSGGIVVLWDSGLVTPVEVIKGQLSMSISFRLKDDEIRWVSGVY
        GLG + K  +VK+ +  EK DIV         C    +G         +AVL +   SGGI+V+WDS  +   EV+ G  S+S+ F +   E  W+S VY
Subjt:  GLGGKVKWSLVKETISPEKHDIV---------CG---LGG--------FAVLESVAMSGGIVVLWDSGLVTPVEVIKGQLSMSISFRLKDDEIRWVSGVY

Query:  GPPRPKGRSAFWEELGDLF
        GP     R  FWEEL D+F
Subjt:  GPPRPKGRSAFWEELGDLF

A5BPI6 Uncharacterized protein8.1e-0934.59Show/hide
Query:  PSGWATLASVGIHAVSP-NEIHLVPESSSKSGKTRK-TDGGLGGKVKWSLVKETISPEKHDIV---------CG---LGG--------FAVLESVAMSGG
        PS   T  S  + A SP  E  +   S  K  K       GLG + K  +VK+ +  EK DIV         C    +G         +AVL +   SGG
Subjt:  PSGWATLASVGIHAVSP-NEIHLVPESSSKSGKTRK-TDGGLGGKVKWSLVKETISPEKHDIV---------CG---LGG--------FAVLESVAMSGG

Query:  IVVLWDSGLVTPVEVIKGQLSMSISFRLKDDEIRWVSGVYGPPRPKGRSAFWEELGDLF
        I+V+WDS  +   EV+ G  S+S+ F +   E  W S VYGP     R  FW EL D+F
Subjt:  IVVLWDSGLVTPVEVIKGQLSMSISFRLKDDEIRWVSGVYGPPRPKGRSAFWEELGDLF

A5BSZ3 Reverse transcriptase domain-containing protein8.1e-0933.96Show/hide
Query:  PSGWATLASVGIHAVSP-NEIHLVPESSSKSGKTRK-TDGGLGGKVKWSLVKETISPEKHDIV---------CG---LGG--------FAVLESVAMSGG
        PS   T  S  + A SP  E  +   S  K  K       GLG + K  +VK+ +  EK DIV         C    +G         + VL +   SGG
Subjt:  PSGWATLASVGIHAVSP-NEIHLVPESSSKSGKTRK-TDGGLGGKVKWSLVKETISPEKHDIV---------CG---LGG--------FAVLESVAMSGG

Query:  IVVLWDSGLVTPVEVIKGQLSMSISFRLKDDEIRWVSGVYGPPRPKGRSAFWEELGDLF
        I+V+WDS  +   EV+ G  S+S+ F +   E  W+S VYGP     R  FW EL D+F
Subjt:  IVVLWDSGLVTPVEVIKGQLSMSISFRLKDDEIRWVSGVYGPPRPKGRSAFWEELGDLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAATAGACCCTAATCAGAGAGTTGTTGAGATGGAATCCGAAAAGAAATCTTTTGCTCAAACAATTTTCGAGGGGGTGGGTTTAGTTAGGGATAAGAAAGTAGAGGG
TGAGAACGAGGGTGAAATTGAGGGTGGAGTTTTAGAGTGCTCGGAGGAGATAGATTTTGTGTTTGATTGTTCTTCGTCGGTTATCATTGAGAGGTTTGAAGCAAGGGAGG
CTTGGTTCTCCATTAAGGATACTATTCAAAAGAGTGTGAAGGTGGGAATGATGTTTAAGTCATTTTGTACGAATATGGCGGTAGGAATTTTCAGTAACAGAGACGAAGTT
AAGGAAGTGTTAAAGGAATGTAGAAAGATTGAATCGAAAGCGTTTAGAGTGCACAAGTGGGACCTCAAACGGATAGTGGAGGATCAGAAACTGGCTTTCTCAGATGAGGA
GCGACACAGCGTGAAAGGAAAGGCTAGGGAGACGAGGATGATTCTGATGCAGCTTCCCTTGTCGGCGACTGTTGCGGGTGATTCTTCTCATAAACTTAAAGCCCCTGATG
AGGATATGGAAAACGGGCCTAAATTGAGCCCACAATCGTTAAAGACCAATGCCTCGAGTGGGTCAAATAAATTACATAAAATGAAAAGAGCTTTAGTTGGTGGGCAGTCT
GAGAAGCGGGTTAATGAGGAGGCTGATTATGGGCCAGGTTCTTTCAACGGTTTGTGGGCTTGGAATAAGGAGATGGTGGCTGATTGTTATCATATGGAAATGGAGTGCAG
CCTTGTGCTTGGGCCTTCTAAACCCCTTTTAGGGGATGACGAGTATGATTTAGATCCATTGGTTGTGAGCTACATAGAGGATGATTCCTTCTTGTCAATGCCATTTTTAG
GGGATGACAAGTATGATTTAGATCCATTGGTTGTGAGCTACATAGAGGATGATTCCTTCTTGGCAATGCCATTTGCTATCCAAGGGGACAGTGGATTGCAACAGGGCAGG
TCCATCATGGACACTTCTTCGATTAGACCAATCCAGGTAAGCTCGTCAGGGGTATCTAGCCAGTCCTTTAAACATTTTGAGTTGCTCTATAATTGGGGTCCTGACGGCTA
CTGGCCCTCGGGGTGGGCAACTTTAGCCTCAGTAGGTATCCATGCGGTCTCGCCTAATGAGATACATTTAGTCCCAGAGTCATCGTCTAAGAGTGGGAAAACTAGAAAGA
CTGACGGGGGGCTTGGGGGCAAAGTCAAGTGGAGTTTGGTGAAAGAGACTATCTCCCCGGAAAAGCATGATATTGTATGTGGATTGGGAGGTTTTGCCGTTCTGGAGTCA
GTGGCGATGTCGGGAGGTATTGTAGTGTTGTGGGATAGCGGATTGGTCACTCCGGTAGAAGTTATTAAAGGTCAGCTTTCTATGTCAATCTCTTTTCGTCTGAAGGATGA
TGAGATTAGATGGGTGTCAGGTGTTTATGGCCCTCCAAGACCTAAAGGTAGGTCGGCTTTTTGGGAGGAGTTGGGTGATCTTTTTGCCTTTGTGGCTCTTGCTGGTGTGG
GGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACAATAGACCCTAATCAGAGAGTTGTTGAGATGGAATCCGAAAAGAAATCTTTTGCTCAAACAATTTTCGAGGGGGTGGGTTTAGTTAGGGATAAGAAAGTAGAGGG
TGAGAACGAGGGTGAAATTGAGGGTGGAGTTTTAGAGTGCTCGGAGGAGATAGATTTTGTGTTTGATTGTTCTTCGTCGGTTATCATTGAGAGGTTTGAAGCAAGGGAGG
CTTGGTTCTCCATTAAGGATACTATTCAAAAGAGTGTGAAGGTGGGAATGATGTTTAAGTCATTTTGTACGAATATGGCGGTAGGAATTTTCAGTAACAGAGACGAAGTT
AAGGAAGTGTTAAAGGAATGTAGAAAGATTGAATCGAAAGCGTTTAGAGTGCACAAGTGGGACCTCAAACGGATAGTGGAGGATCAGAAACTGGCTTTCTCAGATGAGGA
GCGACACAGCGTGAAAGGAAAGGCTAGGGAGACGAGGATGATTCTGATGCAGCTTCCCTTGTCGGCGACTGTTGCGGGTGATTCTTCTCATAAACTTAAAGCCCCTGATG
AGGATATGGAAAACGGGCCTAAATTGAGCCCACAATCGTTAAAGACCAATGCCTCGAGTGGGTCAAATAAATTACATAAAATGAAAAGAGCTTTAGTTGGTGGGCAGTCT
GAGAAGCGGGTTAATGAGGAGGCTGATTATGGGCCAGGTTCTTTCAACGGTTTGTGGGCTTGGAATAAGGAGATGGTGGCTGATTGTTATCATATGGAAATGGAGTGCAG
CCTTGTGCTTGGGCCTTCTAAACCCCTTTTAGGGGATGACGAGTATGATTTAGATCCATTGGTTGTGAGCTACATAGAGGATGATTCCTTCTTGTCAATGCCATTTTTAG
GGGATGACAAGTATGATTTAGATCCATTGGTTGTGAGCTACATAGAGGATGATTCCTTCTTGGCAATGCCATTTGCTATCCAAGGGGACAGTGGATTGCAACAGGGCAGG
TCCATCATGGACACTTCTTCGATTAGACCAATCCAGGTAAGCTCGTCAGGGGTATCTAGCCAGTCCTTTAAACATTTTGAGTTGCTCTATAATTGGGGTCCTGACGGCTA
CTGGCCCTCGGGGTGGGCAACTTTAGCCTCAGTAGGTATCCATGCGGTCTCGCCTAATGAGATACATTTAGTCCCAGAGTCATCGTCTAAGAGTGGGAAAACTAGAAAGA
CTGACGGGGGGCTTGGGGGCAAAGTCAAGTGGAGTTTGGTGAAAGAGACTATCTCCCCGGAAAAGCATGATATTGTATGTGGATTGGGAGGTTTTGCCGTTCTGGAGTCA
GTGGCGATGTCGGGAGGTATTGTAGTGTTGTGGGATAGCGGATTGGTCACTCCGGTAGAAGTTATTAAAGGTCAGCTTTCTATGTCAATCTCTTTTCGTCTGAAGGATGA
TGAGATTAGATGGGTGTCAGGTGTTTATGGCCCTCCAAGACCTAAAGGTAGGTCGGCTTTTTGGGAGGAGTTGGGTGATCTTTTTGCCTTTGTGGCTCTTGCTGGTGTGG
GGTAG
Protein sequenceShow/hide protein sequence
MTIDPNQRVVEMESEKKSFAQTIFEGVGLVRDKKVEGENEGEIEGGVLECSEEIDFVFDCSSSVIIERFEAREAWFSIKDTIQKSVKVGMMFKSFCTNMAVGIFSNRDEV
KEVLKECRKIESKAFRVHKWDLKRIVEDQKLAFSDEERHSVKGKARETRMILMQLPLSATVAGDSSHKLKAPDEDMENGPKLSPQSLKTNASSGSNKLHKMKRALVGGQS
EKRVNEEADYGPGSFNGLWAWNKEMVADCYHMEMECSLVLGPSKPLLGDDEYDLDPLVVSYIEDDSFLSMPFLGDDKYDLDPLVVSYIEDDSFLAMPFAIQGDSGLQQGR
SIMDTSSIRPIQVSSSGVSSQSFKHFELLYNWGPDGYWPSGWATLASVGIHAVSPNEIHLVPESSSKSGKTRKTDGGLGGKVKWSLVKETISPEKHDIVCGLGGFAVLES
VAMSGGIVVLWDSGLVTPVEVIKGQLSMSISFRLKDDEIRWVSGVYGPPRPKGRSAFWEELGDLFAFVALAGVG