| GenBank top hits | e value | %identity | Alignment |
|---|
| AAM93462.1 putative reverse transcriptase [Oryza sativa Japonica Group] | 4.4e-59 | 34.41 | Show/hide |
Query: WNHTNIVFIPKSRQPRLVSDYRPIRLCNIAYKTVTKVIANRLKIILNDIKYECQLAFIPGRSITDNMIIGHETLHYLQNKRKGKQGYAALKLDMSKAYDR
WN TNIV IPK + P ++ + RP LCN+ YK ++KV+ANRLK IL +I + Q AF+PGR ITDN++I +E H+LQNKR GK GYAA+KLDMSKAYDR
Subjt: WNHTNIVFIPKSRQPRLVSDYRPIRLCNIAYKTVTKVIANRLKIILNDIKYECQLAFIPGRSITDNMIIGHETLHYLQNKRKGKQGYAALKLDMSKAYDR
Query: VEWPYLSKVLERLGFHEDLIHLIMDCISSASFSILVNGKAVGNIKSSRGIRQGDPLSSYLFLLCTKGLS-----------VMLQTTYS------------
VEWP+L +L RLGF E LIM+C+++ ++ I VNG IK RG+RQGDPLS YLF++C + S ++L+ T S
Subjt: VEWPYLSKVLERLGFHEDLIHLIMDCISSASFSILVNGKAVGNIKSSRGIRQGDPLSSYLFLLCTKGLS-----------VMLQTTYS------------
Query: --CS-----------------------------------------------ISEQVWRVLENPNLTLLKLLKARYFPSSTLFNTSAKSHSSYFWKGFLWG
CS ++ Q WR+++NP+ +LLKA+YFP+ + + ++ SY W+ L G
Subjt: --CS-----------------------------------------------ISEQVWRVLENPNLTLLKLLKARYFPSSTLFNTSAKSHSSYFWKGFLWG
Query: MDLLQKGTRRNLGNAK--------------------------------------------LQQHLCDKDVQLICSLPISQTTPDLWTWHNDRTGSYSVRS
+ LL+KG +GN + +QQ + D ++I +P+ + D W D G +SV+S
Subjt: MDLLQKGTRRNLGNAK--------------------------------------------LQQHLCDKDVQLICSLPISQTTPDLWTWHNDRTGSYSVRS
Query: GYKL
YKL
Subjt: GYKL
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| XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia] | 1.0e-71 | 29.94 | Show/hide |
Query: MNKKESIQPWNHTNIVFIPKSRQPRLVSDYRPIRLCNIAYKTVTKVIANRLKIILNDIKYECQLAFIPGRSITDNMIIGHETLHYLQNKRKGKQGYAALK
+N + I+ WN T I IPK +QPR +SD+RPI LCN++YK ++K I NRLK ++ + + Q AF+P R+I+DN+IIGHE LH + + + G G AALK
Subjt: MNKKESIQPWNHTNIVFIPKSRQPRLVSDYRPIRLCNIAYKTVTKVIANRLKIILNDIKYECQLAFIPGRSITDNMIIGHETLHYLQNKRKGKQGYAALK
Query: LDMSKAYDRVEWPYLSKVLERLGFHEDLIHLIMDCISSASFSILVNGKAVGNIKSSRGIRQGDPLSSYLFLLCTKGLSVML-------------------
LD+SKA+DRVEW YL ++ ++GF+E I I+ CIS+ FSI +NG G + SRGIRQGDPLS YLFLLC +GLS ++
Subjt: LDMSKAYDRVEWPYLSKVLERLGFHEDLIHLIMDCISSASFSILVNGKAVGNIKSSRGIRQGDPLSSYLFLLCTKGLSVML-------------------
Query: ---------------------------------------------------------QTTYSC-------------------------------------
Q C
Subjt: ---------------------------------------------------------QTTYSC-------------------------------------
Query: ---------------------SISEQVWRVLENPNLTLLKLLKARYFPSSTLFNTSAKSHSSYFWKGFLWGMDLLQKGTRRNLGN---------------
+++ VWR L++PNL + K+LK +YF ++L S S SSYFWKGFLWG DLL KG R +GN
Subjt: ---------------------SISEQVWRVLENPNLTLLKLLKARYFPSSTLFNTSAKSHSSYFWKGFLWGMDLLQKGTRRNLGN---------------
Query: -----------------------------AKLQQHLCDKDVQLICSLPISQ-TTPDLWTWHNDRTGSYSVRSGYKLSMMNQQETSSAQPE----------
+ C++D LI S+PIS D W WH D+ G+YSVRSGYKL M + +SA
Subjt: -----------------------------AKLQQHLCDKDVQLICSLPISQ-TTPDLWTWHNDRTGSYSVRSGYKLSMMNQQETSSAQPE----------
Query: EITNQTGPKHFVWNSFHNSIPTMMNLWRHHIPVEGICPIFKFNPETTEHALFFCKRAKK-----------------------------------------
++T T K F+W S H IPT NL I C I E+ HA F CKRA++
Subjt: EITNQTGPKHFVWNSFHNSIPTMMNLWRHHIPVEGICPIFKFNPETTEHALFFCKRAKK-----------------------------------------
Query: ------NDRNHMIHNRPIPNIEVQCVWILDYLADYHKA
NDRN +IH + + +E +C W+ +L + +A
Subjt: ------NDRNHMIHNRPIPNIEVQCVWILDYLADYHKA
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| XP_024035599.1 uncharacterized protein LOC112096407 [Citrus clementina] | 5.0e-71 | 38.26 | Show/hide |
Query: MNKKESIQPWNHTNIVFIPKSRQPRLVSDYRPIRLCNIAYKTVTKVIANRLKIILNDIKYECQLAFIPGRSITDNMIIGHETLHYLQNKRKGKQGYAALK
+N++ +I P NHT IV IPK+ +PR V++YRPI LCN+ Y V K IANRLK L+ I Q AF+P R ITDN+IIG+E LH +++ + K ALK
Subjt: MNKKESIQPWNHTNIVFIPKSRQPRLVSDYRPIRLCNIAYKTVTKVIANRLKIILNDIKYECQLAFIPGRSITDNMIIGHETLHYLQNKRKGKQGYAALK
Query: LDMSKAYDRVEWPYLSKVLERLGFHEDLIHLIMDCISSASFSILVNGKAVGNIKSSRGIRQGDPLSSYLFLLCTK---------------------GLSV
LD+ KAYDRVEW +L V+ERLGF I+LIM+CI++ +FS+++NG A G I RG+RQG PLS YLFLLC + GL
Subjt: LDMSKAYDRVEWPYLSKVLERLGFHEDLIHLIMDCISSASFSILVNGKAVGNIKSSRGIRQGDPLSSYLFLLCTK---------------------GLSV
Query: MLQTTYS-CSISEQVWRVLENPNLTLLKLLKARYFPSSTLFNTSAKSHSSYFWKGFLWGMDLLQKGTRRNLGNAK-------------------------
+ ++ +++Q WR+L+NP + K++KARY+ ++ N S S+ W+ LWG +LQKGTR +GN +
Subjt: MLQTTYS-CSISEQVWRVLENPNLTLLKLLKARYFPSSTLFNTSAKSHSSYFWKGFLWGMDLLQKGTRRNLGNAK-------------------------
Query: -------------------LQQHLCDKDVQLICSLPISQT-TPDLWTWHNDRTGSYSVRSGYKLSM---MNQQETSSAQPEE------ITNQTGP-KHFV
+ Q D +I S+ + +T D WH DR G YSV+SGY+L++ + TSSA + N G K FV
Subjt: -------------------LQQHLCDKDVQLICSLPISQT-TPDLWTWHNDRTGSYSVRSGYKLSM---MNQQETSSAQPEE------ITNQTGP-KHFV
Query: WNSFHNSIPTMMNLWRHHIPVEGICPIFKFNPETTEHALFFCKRAKK
W + +PT NLWR I E IC I K E HAL CK A+K
Subjt: WNSFHNSIPTMMNLWRHHIPVEGICPIFKFNPETTEHALFFCKRAKK
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| XP_030925054.1 uncharacterized protein LOC115952115 [Quercus lobata] | 1.2e-61 | 32.38 | Show/hide |
Query: NHTNIVFIPKSRQPRLVSDYRPIRLCNIAYKTVTKVIANRLKIILNDIKYECQLAFIPGRSITDNMIIGHETLHYLQNKRKGKQGYAALKLDMSKAYDRV
N T I IPK + P+ VSD+RPI LCN+ YK + KV+ANRLK L + Q AF+ GR I+DN+++ ETLHYL+ K +GK G+ ALKLDMSKAYDRV
Subjt: NHTNIVFIPKSRQPRLVSDYRPIRLCNIAYKTVTKVIANRLKIILNDIKYECQLAFIPGRSITDNMIIGHETLHYLQNKRKGKQGYAALKLDMSKAYDRV
Query: EWPYLSKVLERLGFHEDLIHLIMDCISSASFSILVNGKAVGNIKSSRGIRQGDPLSSYLFLLCTKGLSVMLQ------------------TTYSCS----
EW ++ +++ LG E + +IM C+ S S+SIL+NG+ VGNIK SRG+RQG PLS YLFLLC GL +L+ TY+
Subjt: EWPYLSKVLERLGFHEDLIHLIMDCISSASFSILVNGKAVGNIKSSRGIRQGDPLSSYLFLLCTKGLSVMLQ------------------TTYSCS----
Query: -------------------------------------------------------ISEQVWRVLENPNLTLLKLLKARYFPSSTLFNTSAKSHSSYFWKG
+++QVWR+++N ++ KAR+FP+ ++ + + SY WK
Subjt: -------------------------------------------------------ISEQVWRVLENPNLTLLKLLKARYFPSSTLFNTSAKSHSSYFWKG
Query: FLWGMDLLQKGTRRNLGNAKLQQHLCDK----------------------------------------------DVQLICSLPIS-QTTPDLWTWHNDRT
L D+++KG +GN + + DK + L+ +P+S + PD TW +
Subjt: FLWGMDLLQKGTRRNLGNAKLQQHLCDK----------------------------------------------DVQLICSLPIS-QTTPDLWTWHNDRT
Query: GSYSVRSGYKL---SMMNQQETSSAQPEEITNQTG---------PKHFVWNSFHNSIPTMMNLWRHHIPVEGICPIFKFNPETTEHALFFC
G YS S YKL S +SS Q + + G KHFVW +N++PT NL R HI +C + K PE H L FC
Subjt: GSYSVRSGYKL---SMMNQQETSSAQPEEITNQTG---------PKHFVWNSFHNSIPTMMNLWRHHIPVEGICPIFKFNPETTEHALFFC
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| XP_030932623.1 uncharacterized protein LOC115958352 [Quercus lobata] | 1.3e-63 | 32.79 | Show/hide |
Query: NHTNIVFIPKSRQPRLVSDYRPIRLCNIAYKTVTKVIANRLKIILNDIKYECQLAFIPGRSITDNMIIGHETLHYLQNKRKGKQGYAALKLDMSKAYDRV
N T I IPK + P+ VSD+RPI LCN+ YK + KV+ANRLK L + Q AF+ GR I+DN+++ ETLHYL+ K +GK G+ ALKLDMSK YDRV
Subjt: NHTNIVFIPKSRQPRLVSDYRPIRLCNIAYKTVTKVIANRLKIILNDIKYECQLAFIPGRSITDNMIIGHETLHYLQNKRKGKQGYAALKLDMSKAYDRV
Query: EWPYLSKVLERLGFHEDLIHLIMDCISSASFSILVNGKAVGNIKSSRGIRQGDPLSSYLFLLCTKGLSVMLQ------------------TTYSCS----
EW ++ +++ LG E + +IM C+ S S+SIL+NG+ VGNIK SRG+RQGDPLS YLFLLC GL +L+ TY+
Subjt: EWPYLSKVLERLGFHEDLIHLIMDCISSASFSILVNGKAVGNIKSSRGIRQGDPLSSYLFLLCTKGLSVMLQ------------------TTYSCS----
Query: -------------------------------------------------------ISEQVWRVLENPNLTLLKLLKARYFPSSTLFNTSAKSHSSYFWKG
+++QVWR+++NP ++ KAR+FP+ ++ + + SY WK
Subjt: -------------------------------------------------------ISEQVWRVLENPNLTLLKLLKARYFPSSTLFNTSAKSHSSYFWKG
Query: FLWGMDLLQKGTRRNLGNAKLQQHLCDK----------------------------------------------DVQLICSLPIS-QTTPDLWTWHNDRT
L D+++KG +GN + + DK + L+ +P+S + PD TW +
Subjt: FLWGMDLLQKGTRRNLGNAKLQQHLCDK----------------------------------------------DVQLICSLPIS-QTTPDLWTWHNDRT
Query: GSYSVRSGYKL---SMMNQQETSSAQPEEITNQTG---------PKHFVWNSFHNSIPTMMNLWRHHIPVEGICPIFKFNPETTEHALFFC
G YS S YKL S +SS Q + + G KHFVW +N++PT NL R HI +C + K PE HAL FC
Subjt: GSYSVRSGYKL---SMMNQQETSSAQPEEITNQTG---------PKHFVWNSFHNSIPTMMNLWRHHIPVEGICPIFKFNPETTEHALFFC
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2N9F6W6 Reverse transcriptase domain-containing protein | 8.4e-64 | 34.77 | Show/hide |
Query: MNKKESIQPWNHTNIVFIPKSRQPRLVSDYRPIRLCNIAYKTVTKVIANRLKIILNDIKYECQLAFIPGRSITDNMIIGHETLHYLQNKRKGKQGYAALK
+N ++ N T+I IPK + P L+SDYRPI LCN+ YK ++KVIANRLK++L I + Q AF+PGR ITDN+ + E +H + KRKGK+G ALK
Subjt: MNKKESIQPWNHTNIVFIPKSRQPRLVSDYRPIRLCNIAYKTVTKVIANRLKIILNDIKYECQLAFIPGRSITDNMIIGHETLHYLQNKRKGKQGYAALK
Query: LDMSKAYDRVEWPYLSKVLERLGFHEDLIHLIMDCISSASFSILVNGKAVGNIKSSRGIRQGDPLSSYLFLLCTKGLSVMLQ------------------
LDMSKAYDRVEW +L +L +LGF E + +IM C+ S + +L++ G I +SRGIRQGDPLS YLFL+C +GLS +L+
Subjt: LDMSKAYDRVEWPYLSKVLERLGFHEDLIHLIMDCISSASFSILVNGKAVGNIKSSRGIRQGDPLSSYLFLLCTKGLSVMLQ------------------
Query: -----------------------------TTYSCS-----------ISEQVWRVLENPNLTLLKLLKARYFPSSTLFNTSAKSHSSYFWKGFLWGMDLLQ
Y S +++Q WR+L+NP ++ KARYFPS ++ + ++ S+ W+ L G ++LQ
Subjt: -----------------------------TTYSCS-----------ISEQVWRVLENPNLTLLKLLKARYFPSSTLFNTSAKSHSSYFWKGFLWGMDLLQ
Query: KGTRRNLGNAKLQQHLCDKDVQLICSLPISQTTPDLWTWHNDRTGSYSVRSGYKLSMMNQQETSSAQPEEITN-------------QTGPKHFVWNSFHN
KG L P + P L W + GS++V+S Y L + + S + + + KHF+W ++H
Subjt: KGTRRNLGNAKLQQHLCDKDVQLICSLPISQTTPDLWTWHNDRTGSYSVRSGYKLSMMNQQETSSAQPEEITN-------------QTGPKHFVWNSFHN
Query: SIPTMMNLWRHHIPVEGICPIFKFNPETTEHALFFCKRAK
S+PT+ NL R I C I K +TT HAL+ C A+
Subjt: SIPTMMNLWRHHIPVEGICPIFKFNPETTEHALFFCKRAK
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| A0A2N9FR17 Reverse transcriptase domain-containing protein | 2.1e-62 | 35.29 | Show/hide |
Query: MNKKESIQPWNHTNIVFIPKSRQPRLVSDYRPIRLCNIAYKTVTKVIANRLKIILNDIKYECQLAFIPGRSITDNMIIGHETLHYLQNKRKGKQGYAALK
+N + NHT I IPK++ P V+++RPI LCN+ YK ++KV+ANRLKIIL I + Q AF+ GR ITDN+++ ETLHY+ + + G+ G ALK
Subjt: MNKKESIQPWNHTNIVFIPKSRQPRLVSDYRPIRLCNIAYKTVTKVIANRLKIILNDIKYECQLAFIPGRSITDNMIIGHETLHYLQNKRKGKQGYAALK
Query: LDMSKAYDRVEWPYLSKVLERLGFHEDLIHLIMDCISSASFSILVNGKAVGNIKSSRGIRQGDPLSSYLFLLCTKGLSVMLQTT----------------
LDM+KAYDRVEW +L K++ R+GFH+ I L+ +CIS+ S+SILVNG+ G IK SRG+RQGDPLS YLFLLC +GL ++
Subjt: LDMSKAYDRVEWPYLSKVLERLGFHEDLIHLIMDCISSASFSILVNGKAVGNIKSSRGIRQGDPLSSYLFLLCTKGLSVMLQTT----------------
Query: -------------------------------YSCSISEQVWR----------VLENPNLTLLKLLKARYFPSSTLFNTSAKSHSSYFWKGFLWGMDLLQK
Y + +QV R E + + L+A++FP T+ N + SY W+ L +L+ K
Subjt: -------------------------------YSCSISEQVWR----------VLENPNLTLLKLLKARYFPSSTLFNTSAKSHSSYFWKGFLWGMDLLQK
Query: GTRRNLGNAKLQQHLCDKDVQLICSLPIS-QTTPDLWTWHNDRTGSYSVRSGYKLSMMNQQETSSAQPEEITNQTGPKHFVWNSFHNSIPTMMNLWRHHI
+ ++ + DV+ I +P+S Q D W + G YSVRSGY+ + EE N G + ++PT +NL + HI
Subjt: GTRRNLGNAKLQQHLCDKDVQLICSLPIS-QTTPDLWTWHNDRTGSYSVRSGYKLSMMNQQETSSAQPEEITNQTGPKHFVWNSFHNSIPTMMNLWRHHI
Query: PVEGICPIFKFNPETTEHALFFCKR
P+ C + E T HAL+ CK+
Subjt: PVEGICPIFKFNPETTEHALFFCKR
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| A0A2N9GY38 Reverse transcriptase domain-containing protein | 4.0e-66 | 31.2 | Show/hide |
Query: MNKKESIQPWNHTNIVFIPKSRQPRLVSDYRPIRLCNIAYKTVTKVIANRLKIILNDIKYECQLAFIPGRSITDNMIIGHETLHYLQNKRKGKQGYAALK
+N + ++ NHT I IPK + P V D+RPI LCN+ YK ++KV+ANRLKIIL I E Q AF+PGR ITDN+++ ETLH++Q+++KG+ G ALK
Subjt: MNKKESIQPWNHTNIVFIPKSRQPRLVSDYRPIRLCNIAYKTVTKVIANRLKIILNDIKYECQLAFIPGRSITDNMIIGHETLHYLQNKRKGKQGYAALK
Query: LDMSKAYDRVEWPYLSKVLERLGFHEDLIHLIMDCISSASFSILVNGKAVGNIKSSRGIRQGDPLSSYLFLLCTKGLSVMLQ------------------
LDMSKAYDRVEW YL +V+ER+GF + ++M+CIS+ S+SILVNG+ IK SR +RQGDPLS YLFLLC +G +LQ
Subjt: LDMSKAYDRVEWPYLSKVLERLGFHEDLIHLIMDCISSASFSILVNGKAVGNIKSSRGIRQGDPLSSYLFLLCTKGLSVMLQ------------------
Query: ---------------------------TTYSCS-----------------------------------------------------------ISEQVWRV
Y+ S +++QVWR+
Subjt: ---------------------------TTYSCS-----------------------------------------------------------ISEQVWRV
Query: LENPNLTLLKLLKARYFPSSTLFNTSAKSHSSYFWKGFLWGMDLLQKGTRRNLGN---------------------------AKLQQ--HLCD-------
+ NP+ K+ KA+YFP ++ + S SSY WK + DL++KG+ +GN + L Q HL D
Subjt: LENPNLTLLKLLKARYFPSSTLFNTSAKSHSSYFWKGFLWGMDLLQKGTRRNLGN---------------------------AKLQQ--HLCD-------
Query: ----------KDVQLICSLPI-SQTTPDLWTWHNDRTGSYSVRSGYKLSMMNQQETSSAQPEEITNQTG-------------PKHFVWNSFHNSIPTMMN
D I +P+ S D W R G Y+VRSGY L +++++ + P + T T +HF+W S H S+PT N
Subjt: ----------KDVQLICSLPI-SQTTPDLWTWHNDRTGSYSVRSGYKLSMMNQQETSSAQPEEITNQTG-------------PKHFVWNSFHNSIPTMMN
Query: LWRHHIPVEGICPIFKFNPETTEHALFFCKRAKKNDRNHMIHNRPIPNIEVQCVWILDYLADYHKANQVVSKSILSL
L HI + C ETT HAL+ CK ++ + R +Q D++ +H+ Q++S + L L
Subjt: LWRHHIPVEGICPIFKFNPETTEHALFFCKRAKKNDRNHMIHNRPIPNIEVQCVWILDYLADYHKANQVVSKSILSL
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| A0A6J1DX30 uncharacterized protein LOC111024874 | 4.9e-72 | 29.94 | Show/hide |
Query: MNKKESIQPWNHTNIVFIPKSRQPRLVSDYRPIRLCNIAYKTVTKVIANRLKIILNDIKYECQLAFIPGRSITDNMIIGHETLHYLQNKRKGKQGYAALK
+N + I+ WN T I IPK +QPR +SD+RPI LCN++YK ++K I NRLK ++ + + Q AF+P R+I+DN+IIGHE LH + + + G G AALK
Subjt: MNKKESIQPWNHTNIVFIPKSRQPRLVSDYRPIRLCNIAYKTVTKVIANRLKIILNDIKYECQLAFIPGRSITDNMIIGHETLHYLQNKRKGKQGYAALK
Query: LDMSKAYDRVEWPYLSKVLERLGFHEDLIHLIMDCISSASFSILVNGKAVGNIKSSRGIRQGDPLSSYLFLLCTKGLSVML-------------------
LD+SKA+DRVEW YL ++ ++GF+E I I+ CIS+ FSI +NG G + SRGIRQGDPLS YLFLLC +GLS ++
Subjt: LDMSKAYDRVEWPYLSKVLERLGFHEDLIHLIMDCISSASFSILVNGKAVGNIKSSRGIRQGDPLSSYLFLLCTKGLSVML-------------------
Query: ---------------------------------------------------------QTTYSC-------------------------------------
Q C
Subjt: ---------------------------------------------------------QTTYSC-------------------------------------
Query: ---------------------SISEQVWRVLENPNLTLLKLLKARYFPSSTLFNTSAKSHSSYFWKGFLWGMDLLQKGTRRNLGN---------------
+++ VWR L++PNL + K+LK +YF ++L S S SSYFWKGFLWG DLL KG R +GN
Subjt: ---------------------SISEQVWRVLENPNLTLLKLLKARYFPSSTLFNTSAKSHSSYFWKGFLWGMDLLQKGTRRNLGN---------------
Query: -----------------------------AKLQQHLCDKDVQLICSLPISQ-TTPDLWTWHNDRTGSYSVRSGYKLSMMNQQETSSAQPE----------
+ C++D LI S+PIS D W WH D+ G+YSVRSGYKL M + +SA
Subjt: -----------------------------AKLQQHLCDKDVQLICSLPISQ-TTPDLWTWHNDRTGSYSVRSGYKLSMMNQQETSSAQPE----------
Query: EITNQTGPKHFVWNSFHNSIPTMMNLWRHHIPVEGICPIFKFNPETTEHALFFCKRAKK-----------------------------------------
++T T K F+W S H IPT NL I C I E+ HA F CKRA++
Subjt: EITNQTGPKHFVWNSFHNSIPTMMNLWRHHIPVEGICPIFKFNPETTEHALFFCKRAKK-----------------------------------------
Query: ------NDRNHMIHNRPIPNIEVQCVWILDYLADYHKA
NDRN +IH + + +E +C W+ +L + +A
Subjt: ------NDRNHMIHNRPIPNIEVQCVWILDYLADYHKA
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| A0A803PA46 Uncharacterized protein | 1.6e-62 | 28.62 | Show/hide |
Query: MNKKESIQPWNHTNIVFIPKSRQPRLVSDYRPIRLCNIAYKTVTKVIANRLKIILNDIKYECQLAFIPGRSITDNMIIGHETLHYLQNKRKGKQGYAALK
+N+ +I P N T I IPK +QP V D+RPI LC I YK ++K IANRLK++LN + Q AF+PGR I+DN+II E H ++ K +G++G+ ALK
Subjt: MNKKESIQPWNHTNIVFIPKSRQPRLVSDYRPIRLCNIAYKTVTKVIANRLKIILNDIKYECQLAFIPGRSITDNMIIGHETLHYLQNKRKGKQGYAALK
Query: LDMSKAYDRVEWPYLSKVLERLGFHEDLIHLIMDCISSASFSILVNGKAVGNIKSSRGIRQGDPLSSYLFLLCTKGLSVMLQ------------------
LDM+KA+DRVEW +LS +L+++ F LI+DCI++A+F + VNGK G+I +RGIRQGDPLS YLFLLC +GLS +++
Subjt: LDMSKAYDRVEWPYLSKVLERLGFHEDLIHLIMDCISSASFSILVNGKAVGNIKSSRGIRQGDPLSSYLFLLCTKGLSVMLQ------------------
Query: -----------------TTYSCS--------------------------------------------------------------------------ISE
+ SC+ +++
Subjt: -----------------TTYSCS--------------------------------------------------------------------------ISE
Query: QVWRVLENPNLTLLKLLKARYFPSSTLFNTSAKSHSSYFWKGFLWGMDLLQKGTRRNLGNAK--------------------------------------
Q WR+L++PN + ++L ARY P+S+ S S+ W+ WG +LL KG +GN +
Subjt: QVWRVLENPNLTLLKLLKARYFPSSTLFNTSAKSHSSYFWKGFLWGMDLLQKGTRRNLGNAK--------------------------------------
Query: --LQQHLCDKDVQLICSLPIS-QTTPDLWTWHNDRTGSYSVRSGYKLSMMNQQETSSAQPEEITNQTGP----------------KHFVWNSFHNSIPTM
LQ VQ I S+P+ D W ++G+YSV+SGY LS SS P +I + + P KHFV+ + N++PT
Subjt: --LQQHLCDKDVQLICSLPIS-QTTPDLWTWHNDRTGSYSVRSGYKLSMMNQQETSSAQPEEITNQTGP----------------KHFVWNSFHNSIPTM
Query: MNLWRHHIPVEGICPIFKFNPETTEHALFFCKRAKK--------------NDRNHMIHNRPIPNIEVQCVWILDYLADYHKANQV-VSKSILSLE---DF
NL I +C ET HALFFC+ + ++RN + N+ +LA+Y ++Q S+ ++
Subjt: MNLWRHHIPVEGICPIFKFNPETTEHALFFCKRAKK--------------NDRNHMIHNRPIPNIEVQCVWILDYLADYHKANQV-VSKSILSLE---DF
Query: YEMIVKGEDIIMHTDAAFDPVNRKSGLGIVFRDKHGVLQAGLA
+E G + ++TDAA + K+G G V R+ G + A +A
Subjt: YEMIVKGEDIIMHTDAAFDPVNRKSGLGIVFRDKHGVLQAGLA
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O00370 LINE-1 retrotransposable element ORF2 protein | 1.2e-14 | 26.34 | Show/hide |
Query: KKESIQP--WNHTNIVFIPK-SRQPRLVSDYRPIRLCNIAYKTVTKVIANRLKIILNDIKYECQLAFIPGRSITDNMIIGHETLHYLQNKRKGK-QGYAA
+KE I P + +I+ IPK R ++RPI L NI K + K++ANR++ + + + Q+ FIPG N+ ++++ +Q+ + K + +
Subjt: KKESIQP--WNHTNIVFIPK-SRQPRLVSDYRPIRLCNIAYKTVTKVIANRLKIILNDIKYECQLAFIPGRSITDNMIIGHETLHYLQNKRKGK-QGYAA
Query: LKLDMSKAYDRVEWPYLSKVLERLGFHEDLIHLIMDCISSASFSILVNGKAVGNIKSSRGIRQGDPLSSYLFLLC-------------TKGLSVMLQTTY
+ +D KA+D+++ P++ K L +LG + +I + +I++NG+ + G RQG PLS LF + KG+ + +
Subjt: LKLDMSKAYDRVEWPYLSKVLERLGFHEDLIHLIMDCISSASFSILVNGKAVGNIKSSRGIRQGDPLSSYLFLLC-------------TKGLSVMLQTTY
Query: SCSISEQVWRVLENPNLTLLKLLK
++ + LENP ++ LLK
Subjt: SCSISEQVWRVLENPNLTLLKLLK
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| P11369 LINE-1 retrotransposable element ORF2 protein | 7.9e-19 | 36.94 | Show/hide |
Query: IVFIPK-SRQPRLVSDYRPIRLCNIAYKTVTKVIANRLKIILNDIKYECQLAFIPGRSITDNMIIGHETLHYLQNKRKGKQGYAALKLDMSKAYDRVEWP
I IPK + P + ++RPI L NI K + K++ANR++ + I + Q+ FIPG N+ +HY+ NK K K + + LD KA+D+++ P
Subjt: IVFIPK-SRQPRLVSDYRPIRLCNIAYKTVTKVIANRLKIILNDIKYECQLAFIPGRSITDNMIIGHETLHYLQNKRKGKQGYAALKLDMSKAYDRVEWP
Query: YLSKVLERLGFHEDLIHLIMDCISSASFSILVNGKAVGNIKSSRGIRQGDPLSSYLF
++ KVLER G +++I S +I VNG+ + I G RQG PLS YLF
Subjt: YLSKVLERLGFHEDLIHLIMDCISSASFSILVNGKAVGNIKSSRGIRQGDPLSSYLF
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| P14381 Transposon TX1 uncharacterized 149 kDa protein | 8.7e-18 | 32.12 | Show/hide |
Query: IPKSRQPRLVSDYRPIRLCNIAYKTVTKVIANRLKIILNDIKYECQLAFIPGRSITDNMIIGHETLHYLQNKRKGKQGYAALKLDMSKAYDRVEWPYLSK
+PK RL+ ++RP+ L + YK V K I+ RLK +L ++ + Q +PGR+I DN+ + + LH+ R+ A L LD KA+DRV+ YL
Subjt: IPKSRQPRLVSDYRPIRLCNIAYKTVTKVIANRLKIILNDIKYECQLAFIPGRSITDNMIIGHETLHYLQNKRKGKQGYAALKLDMSKAYDRVEWPYLSK
Query: VLERLGFHEDLIHLIMDCISSASFSILVNGKAVGNIKSSRGIRQGDPLSSYLFLLCTKGLSVMLQ
L+ F + + +SA + +N + RG+RQG PLS L+ L + +L+
Subjt: VLERLGFHEDLIHLIMDCISSASFSILVNGKAVGNIKSSRGIRQGDPLSSYLFLLCTKGLSVMLQ
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| Q03274 Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) | 3.2e-12 | 27.68 | Show/hide |
Query: PWNHTNIVFIPKSRQPRLVSDYRPIRLCNIAYKTVTKVIANRLKIILNDIKYECQLAFIPGRSITDNMIIGHETLHYLQNKRKGKQGYAALKLDMSKAYD
PW IPK S++RPI + + + + +++A RL+ + + A I G ++ +++++ Y+ ++R+ ++ Y + LD+ KA+D
Subjt: PWNHTNIVFIPKSRQPRLVSDYRPIRLCNIAYKTVTKVIANRLKIILNDIKYECQLAFIPGRSITDNMIIGHETLHYLQNKRKGKQGYAALKLDMSKAYD
Query: RVEWPYLSKVLERLGFHEDLIHLIMDCISSASFSILVN-GKAVGNIKSSRGIRQGDPLSSYLFLLCTKGLSVMLQTT
V + + L+RLG E + I +S ++ +I V G I RG++QGDPLS +LF L LQ+T
Subjt: RVEWPYLSKVLERLGFHEDLIHLIMDCISSASFSILVN-GKAVGNIKSSRGIRQGDPLSSYLFLLCTKGLSVMLQTT
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| Q05118 Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) | 6.3e-08 | 33.33 | Show/hide |
Query: HYLQNKRKGKQGYAALKLDMSKAYDRVEWPYLSKVLERLGFHEDLIHLIMDCISSASFSILVNGKAVGNIKSSRGIRQGDPLSSYLF
HY++ +R + Y + LD+ KA+D V P + + + G + + IM I+ A +I+V G+ I G++QGDPLS LF
Subjt: HYLQNKRKGKQGYAALKLDMSKAYDRVEWPYLSKVLERLGFHEDLIHLIMDCISSASFSILVNGKAVGNIKSSRGIRQGDPLSSYLF
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