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Lag0032107 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032107
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr11:24888938..24889396
RNA-Seq ExpressionLag0032107
SyntenyLag0032107
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023874613.1 uncharacterized protein LOC111987139 [Quercus suber]2.3e-2240.85Show/hide
Query:  MASLTNALNKLTSSEVVKSISTLAKGYSKKEGHDV--EEVQYVGNRPFT---EGVSNFYHPSLCNHENFSYSNAKNVLQPPPGFASFSAPEKKNNLEEMV
        +ASL++ ++ LT+  + +    +A        ++   E+VQY+ NR +      + N+YHP L NHENFSY N KNVLQPPPGF S    EKK +LE+ +
Subjt:  MASLTNALNKLTSSEVVKSISTLAKGYSKKEGHDV--EEVQYVGNRPFT---EGVSNFYHPSLCNHENFSYSNAKNVLQPPPGFASFSAPEKKNNLEEMV

Query:  AMFIKEQKVLNV-------NLQTRVNNHDTSLKNMEVQIGQITSAVNALQKGKFPSDTEPNPRE
          F++E K           N++T  +N   ++KN+EVQIGQ+ + +NA Q+G FPS+TE NP+E
Subjt:  AMFIKEQKVLNV-------NLQTRVNNHDTSLKNMEVQIGQITSAVNALQKGKFPSDTEPNPRE

XP_023903214.1 uncharacterized protein LOC112015077 [Quercus suber]3.0e-2240.85Show/hide
Query:  MASLTNALNKLTSSEVVKSISTLAKGYSKKEGHDV--EEVQYVGNRPFT---EGVSNFYHPSLCNHENFSYSNAKNVLQPPPGFASFSAPEKKNNLEEMV
        +ASL++ ++ L++  + +S   +A        ++   E+VQY+ NR +      + N+YHP L NHENFSY N KNVLQPPPGF S    EKK +LE+ +
Subjt:  MASLTNALNKLTSSEVVKSISTLAKGYSKKEGHDV--EEVQYVGNRPFT---EGVSNFYHPSLCNHENFSYSNAKNVLQPPPGFASFSAPEKKNNLEEMV

Query:  AMFIKEQKVLNV-------NLQTRVNNHDTSLKNMEVQIGQITSAVNALQKGKFPSDTEPNPRE
          F++E K           N++T  +N   ++KN+EVQIGQ+ + +NA Q+G FPS+TE NP+E
Subjt:  AMFIKEQKVLNV-------NLQTRVNNHDTSLKNMEVQIGQITSAVNALQKGKFPSDTEPNPRE

XP_023929660.1 uncharacterized protein LOC112040975 [Quercus suber]1.7e-2241.46Show/hide
Query:  MASLTNALNKLTSSEVVKSISTLAKGYSKKEGHDV--EEVQYVGNRPFT---EGVSNFYHPSLCNHENFSYSNAKNVLQPPPGFASFSAPEKKNNLEEMV
        +ASL++ ++ LT+  + +S+  +A        ++   E VQY+ NR +      + N+YHP L NHENFSY N KNVLQPPPGF S    EKK +LE+ +
Subjt:  MASLTNALNKLTSSEVVKSISTLAKGYSKKEGHDV--EEVQYVGNRPFT---EGVSNFYHPSLCNHENFSYSNAKNVLQPPPGFASFSAPEKKNNLEEMV

Query:  AMFIKEQKV-------LNVNLQTRVNNHDTSLKNMEVQIGQITSAVNALQKGKFPSDTEPNPRE
          F++E K           N++T  +N    +KN+EVQIGQ+ + +NA Q+G FPS+TE NP+E
Subjt:  AMFIKEQKV-------LNVNLQTRVNNHDTSLKNMEVQIGQITSAVNALQKGKFPSDTEPNPRE

XP_024017305.1 uncharacterized protein LOC112090376 [Morus notabilis]8.7e-2243.29Show/hide
Query:  MASLTNALNKLTSSEVVKSISTLAKGYSKKEGHD---VEEVQYVGNRPFT---EGVSNFYHPSLCNHENFSYSNAKNVLQPPPGFASFSAPEKKNNLEEM
        +++L+N +  LT+ E   S   +A G S    HD    E+VQ+V NR F      + N YHP L NHENFSY+N +N+LQPPPGF +    EKK ++E++
Subjt:  MASLTNALNKLTSSEVVKSISTLAKGYSKKEGHD---VEEVQYVGNRPFT---EGVSNFYHPSLCNHENFSYSNAKNVLQPPPGFASFSAPEKKNNLEEM

Query:  VAMFI--------KEQKVLNVNLQTRVNNHDTSLKNMEVQIGQITSAVNALQKGKFPSDTEPNP
        ++ FI        K++  L+ N++T  NN + ++K++EVQIGQ+ +AV     GKFPSDTEPNP
Subjt:  VAMFI--------KEQKVLNVNLQTRVNNHDTSLKNMEVQIGQITSAVNALQKGKFPSDTEPNP

XP_030941443.1 uncharacterized protein LOC115966335 [Quercus lobata]1.5e-2148.03Show/hide
Query:  EEVQYVGNRPFT---EGVSNFYHPSLCNHENFSYSNAKNVLQPPPGFASFSAPEKKNNLEEMVAMFIKEQKVLNV-------NLQTRVNNHDTSLKNMEV
        E+VQY+ NR +      + N+YHP L NHENFSY N KNVLQPPPGF S    EKK +LE+ +  F++E K           N++T  +N   ++KN EV
Subjt:  EEVQYVGNRPFT---EGVSNFYHPSLCNHENFSYSNAKNVLQPPPGFASFSAPEKKNNLEEMVAMFIKEQKVLNV-------NLQTRVNNHDTSLKNMEV

Query:  QIGQITSAVNALQKGKFPSDTEPNPRE
        QIGQ+ + +NA Q+G FPS+TE NP+E
Subjt:  QIGQITSAVNALQKGKFPSDTEPNPRE

TrEMBL top hitse value%identityAlignment
A0A2I4G4Q3 uncharacterized protein LOC1090047122.6e-1940.12Show/hide
Query:  MASLTNALNKLTSSEVVKSISTLAKGYSKKEGHDV--EEVQYVGNRPFT---EGVSNFYHPSLCNHENFSYSNAKNVL--QPPPGFASFSAPEKKNNLEE
        +A+L++ ++ LT+  + +S   +         ++V  E+VQY+ NR +      + N+YHP   NHEN SY N KNVL  QPPPGF S S+ EKK +LE+
Subjt:  MASLTNALNKLTSSEVVKSISTLAKGYSKKEGHDV--EEVQYVGNRPFT---EGVSNFYHPSLCNHENFSYSNAKNVL--QPPPGFASFSAPEKKNNLEE

Query:  MVAMFIKEQKVLNVNLQTRVNNHDTSL--------KNMEVQIGQITSAVNALQKGKFPSDTEPNPRE
         +  FI+E         +R++N +T          KN+EVQIGQ+ + +NA Q+G FPS+TE NPRE
Subjt:  MVAMFIKEQKVLNVNLQTRVNNHDTSL--------KNMEVQIGQITSAVNALQKGKFPSDTEPNPRE

A0A2P5B1T0 Uncharacterized protein6.3e-1835.93Show/hide
Query:  MASLTNALNKLTSSEVVKSISTLAKGYSK--KEGHDVEEVQYVGNRPFTEGVSNF-------YHPSLCNHENFSYSNAKNVLQPPPGFASFSAPEKKNNL
        +++LT+ ++ LT+ +   S  ++    +    +G D+ +V Y+ N  F    +N        YHP LCNHENFSY+N +NVLQPP G  + S  EKK +L
Subjt:  MASLTNALNKLTSSEVVKSISTLAKGYSK--KEGHDVEEVQYVGNRPFTEGVSNF-------YHPSLCNHENFSYSNAKNVLQPPPGFASFSAPEKKNNL

Query:  EEMVAMFI-------KEQKVLNVNLQTRVNNHDTSLKNMEVQIGQITSAVNALQKGKFPSDTEPNPR
        E++++ FI       K+ +    N++   NN + ++K++EVQIGQ+ +++     GKFP+DTE NP+
Subjt:  EEMVAMFI-------KEQKVLNVNLQTRVNNHDTSLKNMEVQIGQITSAVNALQKGKFPSDTEPNPR

A0A2P5BPI6 Uncharacterized protein1.4e-1747.66Show/hide
Query:  YHPSLCNHENFSYSNAKNVLQPPPGFASFSAPEKKNNLEEMVAMFI--------KEQKVLNVNLQTRVNNHDTSLKNMEVQIGQITSAVNALQKGKFPSD
        Y+P L NHENFSY N +NVLQPPPGF +    EKK++LE++++ FI        K++  L+ N++T  NN + ++K++EVQIGQ+ +++   Q GKFPSD
Subjt:  YHPSLCNHENFSYSNAKNVLQPPPGFASFSAPEKKNNLEEMVAMFI--------KEQKVLNVNLQTRVNNHDTSLKNMEVQIGQITSAVNALQKGKFPSD

Query:  TEPNPRE
        TE NP++
Subjt:  TEPNPRE

A0A6P9DWY0 uncharacterized protein LOC1183440266.7e-2039.63Show/hide
Query:  MASLTNALNKLTSSEVVKSISTLAKGYSKKEGHDV--EEVQYVGNRPFT---EGVSNFYHPSLCNHENFSYSNAKNVLQPPPGFASFSAPEKKNNLEEMV
        +ASL++ ++ LT+  + +S   +A        ++   E+VQY+ NR +      + N+YH  L NHEN SY N KNVLQP PGF S    EKK +LE+ +
Subjt:  MASLTNALNKLTSSEVVKSISTLAKGYSKKEGHDV--EEVQYVGNRPFT---EGVSNFYHPSLCNHENFSYSNAKNVLQPPPGFASFSAPEKKNNLEEMV

Query:  AMFIKEQKVLNV-------NLQTRVNNHDTSLKNMEVQIGQITSAVNALQKGKFPSDTEPNPRE
          F++E             N++T  +N   ++KN+EVQIGQ+ + +NA Q+G FPS+TE NPRE
Subjt:  AMFIKEQKVLNV-------NLQTRVNNHDTSLKNMEVQIGQITSAVNALQKGKFPSDTEPNPRE

A0A6P9F5T6 uncharacterized protein LOC1089899761.8e-1744.19Show/hide
Query:  EEVQYVGNRPFT---EGVSNFYHPSLCNHENFSYSNAKNVL--QPPPGFASFSAPEKKNNLEEMVAMFIKEQKVLNV-------NLQTRVNNHDTSLKNM
        E+VQY+ N  +      + N+Y+P L NHEN SY N KNVL  QPPPGF S S+ EKK +LE+ +  F++E  V          N++T  +N   ++KN+
Subjt:  EEVQYVGNRPFT---EGVSNFYHPSLCNHENFSYSNAKNVL--QPPPGFASFSAPEKKNNLEEMVAMFIKEQKVLNV-------NLQTRVNNHDTSLKNM

Query:  EVQIGQITSAVNALQKGKFPSDTEPNPRE
        EVQIGQ+   +N+ Q+G FPS+ E NP E
Subjt:  EVQIGQITSAVNALQKGKFPSDTEPNPRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCTTTGACCAACGCCCTGAACAAGTTGACTTCATCTGAGGTGGTCAAATCCATTTCCACCTTAGCTAAAGGTTATTCAAAGAAGGAAGGTCATGATGTGGAAGA
AGTCCAGTACGTGGGAAATAGACCATTTACTGAAGGAGTATCGAACTTCTACCACCCCAGTCTGTGCAATCATGAGAACTTCTCGTACTCGAATGCGAAGAATGTTTTGC
AGCCACCGCCAGGTTTTGCATCATTCAGTGCGCCTGAAAAGAAGAATAACCTGGAGGAGATGGTGGCTATGTTTATTAAAGAACAAAAAGTGTTGAACGTAAATCTCCAA
ACGAGAGTTAATAACCATGACACATCTCTGAAAAATATGGAAGTCCAAATAGGACAGATCACTTCAGCGGTGAATGCCCTTCAGAAGGGAAAATTTCCAAGCGACACTGA
ACCTAACCCAAGAGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCATCTTTGACCAACGCCCTGAACAAGTTGACTTCATCTGAGGTGGTCAAATCCATTTCCACCTTAGCTAAAGGTTATTCAAAGAAGGAAGGTCATGATGTGGAAGA
AGTCCAGTACGTGGGAAATAGACCATTTACTGAAGGAGTATCGAACTTCTACCACCCCAGTCTGTGCAATCATGAGAACTTCTCGTACTCGAATGCGAAGAATGTTTTGC
AGCCACCGCCAGGTTTTGCATCATTCAGTGCGCCTGAAAAGAAGAATAACCTGGAGGAGATGGTGGCTATGTTTATTAAAGAACAAAAAGTGTTGAACGTAAATCTCCAA
ACGAGAGTTAATAACCATGACACATCTCTGAAAAATATGGAAGTCCAAATAGGACAGATCACTTCAGCGGTGAATGCCCTTCAGAAGGGAAAATTTCCAAGCGACACTGA
ACCTAACCCAAGAGAGTAG
Protein sequenceShow/hide protein sequence
MASLTNALNKLTSSEVVKSISTLAKGYSKKEGHDVEEVQYVGNRPFTEGVSNFYHPSLCNHENFSYSNAKNVLQPPPGFASFSAPEKKNNLEEMVAMFIKEQKVLNVNLQ
TRVNNHDTSLKNMEVQIGQITSAVNALQKGKFPSDTEPNPRE