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Lag0032108 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032108
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr11:24925115..24928449
RNA-Seq ExpressionLag0032108
SyntenyLag0032108
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GEW88685.1 hypothetical protein [Tanacetum cinerariifolium]7.8e-0852.63Show/hide
Query:  QVKIWGICSTIGHATYACPTLQQDSPFEVNAISGFPAIHNQRSFNQFGDVFNPCWRD
        QVK  GICS +GH T  CPTLQ  SP ++NA+ GFP    QR ++ F + +NP WRD
Subjt:  QVKIWGICSTIGHATYACPTLQQDSPFEVNAISGFPAIHNQRSFNQFGDVFNPCWRD

PIN03645.1 hypothetical protein CDL12_23824 [Handroanthus impetiginosus]5.1e-0750.77Show/hide
Query:  QLVA---VQVKIWGICSTIGHATYACPTLQQDSPFEVNAISGFPAIHNQRSFNQFGDVFNPCWRD
        QLVA    QVK  GIC+ IGH T  CPTLQ+DS    NA+ GFP    QR ++ + + +NP WRD
Subjt:  QLVA---VQVKIWGICSTIGHATYACPTLQQDSPFEVNAISGFPAIHNQRSFNQFGDVFNPCWRD

PIN19322.1 hypothetical protein CDL12_08003 [Handroanthus impetiginosus]4.6e-0848.44Show/hide
Query:  QVKIWGICSTIGHATYACPTLQQDSPFEVNAISGFPAIHNQRSFNQFGDVFNPCWRDLIRAKIK
        QVK  GIC+ IGH T  CPTLQ+DS    NA+ GFP   +QR ++ + + +NP WRD    K+K
Subjt:  QVKIWGICSTIGHATYACPTLQQDSPFEVNAISGFPAIHNQRSFNQFGDVFNPCWRDLIRAKIK

PIN20442.1 hypothetical protein CDL12_06873 [Handroanthus impetiginosus]1.3e-0748.44Show/hide
Query:  QVKIWGICSTIGHATYACPTLQQDSPFEVNAISGFPAIHNQRSFNQFGDVFNPCWRDLIRAKIK
        QVK  GIC+ IGH T  CPTLQ+DS    NA+ GFP    QR ++ + + +NP WRD    K+K
Subjt:  QVKIWGICSTIGHATYACPTLQQDSPFEVNAISGFPAIHNQRSFNQFGDVFNPCWRDLIRAKIK

XP_030444704.1 uncharacterized protein LOC115667232 [Syzygium oleosum]5.1e-0740.24Show/hide
Query:  ARERDSELNIDLDNSFQLVAV----QVKIWGICSTIGHATYACPTLQQDSPFEVNAISGFPAIHNQRSFNQFGDVFNPCWRD
        A   DS++N  L +  Q + V    Q K+ GIC+  GH+T  CPTLQ D+P + NA+  FP +  QR ++ + + +NP WRD
Subjt:  ARERDSELNIDLDNSFQLVAV----QVKIWGICSTIGHATYACPTLQQDSPFEVNAISGFPAIHNQRSFNQFGDVFNPCWRD

TrEMBL top hitse value%identityAlignment
A0A2G9GEL6 Retrotrans_gag domain-containing protein2.5e-0750.77Show/hide
Query:  QLVA---VQVKIWGICSTIGHATYACPTLQQDSPFEVNAISGFPAIHNQRSFNQFGDVFNPCWRD
        QLVA    QVK  GIC+ IGH T  CPTLQ+DS    NA+ GFP    QR ++ + + +NP WRD
Subjt:  QLVA---VQVKIWGICSTIGHATYACPTLQQDSPFEVNAISGFPAIHNQRSFNQFGDVFNPCWRD

A0A2G9GWR1 Retrotrans_gag domain-containing protein7.2e-0749.12Show/hide
Query:  QVKIWGICSTIGHATYACPTLQQDSPFEVNAISGFPAIHNQRSFNQFGDVFNPCWRD
        QVK  GIC+ IGH T  CPTLQ+DS    NA+ GFP    QR ++ + + +NP W+D
Subjt:  QVKIWGICSTIGHATYACPTLQQDSPFEVNAISGFPAIHNQRSFNQFGDVFNPCWRD

A0A2G9HP75 Retrotrans_gag domain-containing protein2.2e-0848.44Show/hide
Query:  QVKIWGICSTIGHATYACPTLQQDSPFEVNAISGFPAIHNQRSFNQFGDVFNPCWRDLIRAKIK
        QVK  GIC+ IGH T  CPTLQ+DS    NA+ GFP   +QR ++ + + +NP WRD    K+K
Subjt:  QVKIWGICSTIGHATYACPTLQQDSPFEVNAISGFPAIHNQRSFNQFGDVFNPCWRDLIRAKIK

A0A2G9HSE5 Retrotrans_gag domain-containing protein6.5e-0848.44Show/hide
Query:  QVKIWGICSTIGHATYACPTLQQDSPFEVNAISGFPAIHNQRSFNQFGDVFNPCWRDLIRAKIK
        QVK  GIC+ IGH T  CPTLQ+DS    NA+ GFP    QR ++ + + +NP WRD    K+K
Subjt:  QVKIWGICSTIGHATYACPTLQQDSPFEVNAISGFPAIHNQRSFNQFGDVFNPCWRDLIRAKIK

A0A2G9I3Q1 Retrotrans_gag domain-containing protein5.5e-0740.91Show/hide
Query:  KRKARERDSELNIDLDNSFQLV-------AVQVKIWGICSTIGHATYACPTLQQDSPFEVNAISGFPAIHNQRSFNQFGDVFNPCWRD
        KR     +S L   + N   LV         QVK  GIC+ IGH T  CPTLQ+DS    NA+ GFP    QR ++ + + +NP WRD
Subjt:  KRKARERDSELNIDLDNSFQLV-------AVQVKIWGICSTIGHATYACPTLQQDSPFEVNAISGFPAIHNQRSFNQFGDVFNPCWRD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATGGCAGTTTCTGCTCCCAGTTTTGCTGGCACAGAATTTGCTTCCTCTAGTCGCCCAGAAGCATAATCTACACAAAATAATTTCCAATGCTTCCATTCTTCCAAA
TGGGTTAAAACATATAATTGTTGATACGAGACCTGACTCGTATGATGATAAGGTGGTGTGGGAGTTCTGTTGTGTTGAAGTAAGGATTTTGATAGCAAGAGGTCGAGAAT
ACATTTCGAGTAAAAATGAGCTAAAAAGGGTTGAATTGGAGTCATTTTGTGAACCGGTAGCTCAAGAGATGATGAAGAAGGACCATGACTCAATCCTAGTGTCAAAGCGC
TCAAGACAACGTGAATTTGGTGGCAAAGAATTCTTGTTTTGCTCAGGCATCGCAAAGGAGGAGAGGAGATTAAAGAGAAAAGCAAGAGAAAGAGACAGTGAGCTTAACAT
AGACCTCGACAACTCATTTCAATTGGTTGCAGTGCAGGTCAAGATCTGGGGCATTTGTTCTACTATAGGACATGCCACATATGCTTGCCCGACTTTGCAGCAGGACTCCC
CATTTGAAGTGAACGCTATAAGTGGATTTCCAGCCATCCATAACCAGAGGTCGTTCAATCAGTTCGGAGACGTATTTAATCCTTGTTGGAGAGACCTGATAAGGGCAAAA
ATCAAATGGGACCGCATTTCTGGAAAAACAGAGGTCGTTCCGAGTCTGTCGCGGGTCGTTTTGAACGAGACTTTTGCGCACCTAACCAGCACCTATTTCGTGGCTCCTCA
ACTACTTCCAACACTATGTAAGGCCTTGATTCGAAGTCAAATCCAAGCAGAACTCAATGGGAAGAAAAGGGTGGTGACAGAACCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATGGCAGTTTCTGCTCCCAGTTTTGCTGGCACAGAATTTGCTTCCTCTAGTCGCCCAGAAGCATAATCTACACAAAATAATTTCCAATGCTTCCATTCTTCCAAA
TGGGTTAAAACATATAATTGTTGATACGAGACCTGACTCGTATGATGATAAGGTGGTGTGGGAGTTCTGTTGTGTTGAAGTAAGGATTTTGATAGCAAGAGGTCGAGAAT
ACATTTCGAGTAAAAATGAGCTAAAAAGGGTTGAATTGGAGTCATTTTGTGAACCGGTAGCTCAAGAGATGATGAAGAAGGACCATGACTCAATCCTAGTGTCAAAGCGC
TCAAGACAACGTGAATTTGGTGGCAAAGAATTCTTGTTTTGCTCAGGCATCGCAAAGGAGGAGAGGAGATTAAAGAGAAAAGCAAGAGAAAGAGACAGTGAGCTTAACAT
AGACCTCGACAACTCATTTCAATTGGTTGCAGTGCAGGTCAAGATCTGGGGCATTTGTTCTACTATAGGACATGCCACATATGCTTGCCCGACTTTGCAGCAGGACTCCC
CATTTGAAGTGAACGCTATAAGTGGATTTCCAGCCATCCATAACCAGAGGTCGTTCAATCAGTTCGGAGACGTATTTAATCCTTGTTGGAGAGACCTGATAAGGGCAAAA
ATCAAATGGGACCGCATTTCTGGAAAAACAGAGGTCGTTCCGAGTCTGTCGCGGGTCGTTTTGAACGAGACTTTTGCGCACCTAACCAGCACCTATTTCGTGGCTCCTCA
ACTACTTCCAACACTATGTAAGGCCTTGATTCGAAGTCAAATCCAAGCAGAACTCAATGGGAAGAAAAGGGTGGTGACAGAACCCTAG
Protein sequenceShow/hide protein sequence
MTWQFLLPVLLAQNLLPLVAQKHNLHKIISNASILPNGLKHIIVDTRPDSYDDKVVWEFCCVEVRILIARGREYISSKNELKRVELESFCEPVAQEMMKKDHDSILVSKR
SRQREFGGKEFLFCSGIAKEERRLKRKARERDSELNIDLDNSFQLVAVQVKIWGICSTIGHATYACPTLQQDSPFEVNAISGFPAIHNQRSFNQFGDVFNPCWRDLIRAK
IKWDRISGKTEVVPSLSRVVLNETFAHLTSTYFVAPQLLPTLCKALIRSQIQAELNGKKRVVTEP