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Lag0032112 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032112
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionMADS-box protein AGL42
Genome locationchr11:25073635..25074056
RNA-Seq ExpressionLag0032112
SyntenyLag0032112
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR002100 - Transcription factor, MADS-box
IPR033896 - MADS MEF2-like
IPR036879 - Transcription factor, MADS-box superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AIU94286.1 SOC1-like protein [Prunus pseudocerasus]3.1e-2295.08Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSSE
        MVRGK+EMKRIENATSRQVTFSKRRNGLLKKA+ELSVLCDAQVSVIIFSQKGRLYEFSSS+
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSSE

BBN69799.1 AGAMOUS-like 42 [Prunus dulcis]3.1e-2295.08Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSSE
        MVRGK+EMKRIENATSRQVTFSKRRNGLLKKA+ELSVLCDAQVSVIIFSQKGRLYEFSSS+
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSSE

KAF2569992.1 hypothetical protein F2Q70_00000492 [Brassica cretica]1.8e-2287.69Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSSEFSLL
        MVRGK+EMK+IENATSRQVTFSKRRNGLLKKAYELSVLCDAQVS+I+FSQ+GRLYEFSSSE++ L
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSSEFSLL

KAF3973568.1 hypothetical protein CMV_003023 [Castanea mollissima]1.4e-2287.88Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSSEFSLLS
        MVRGK++MKRIENATSRQVTFSKRRNGLLKKAYELSVLCDA+V+VIIFSQKGRLYEFSS+E+  LS
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSSEFSLLS

XP_021804055.1 MADS-box protein AGL42-like [Prunus avium]8.2e-2395.16Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSSEF
        MVRGK+EMKRIENATSRQVTFSKRRNGLLKKA+ELSVLCDAQVSVIIFSQKGRLYEFSSSE+
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSSEF

TrEMBL top hitse value%identityAlignment
A0A314V437 SOC1-like protein1.5e-2295.08Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSSE
        MVRGK+EMKRIENATSRQVTFSKRRNGLLKKA+ELSVLCDAQVSVIIFSQKGRLYEFSSS+
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSSE

A0A6J1BSU4 MADS-box protein AGL42-like isoform X11.5e-2295.08Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSSE
        MVRGKVEMKRIEN+TSRQVTFSKRRNGLLKKAYELSVLCDAQVSV+IFSQKGRLYEFSSS+
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSSE

A0A6J5U7J6 Uncharacterized protein1.5e-2295.08Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSSE
        MVRGK+EMKRIENATSRQVTFSKRRNGLLKKA+ELSVLCDAQVSVIIFSQKGRLYEFSSS+
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSSE

A0A6P5RSP7 MADS-box protein AGL42-like4.0e-2395.16Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSSEF
        MVRGK+EMKRIENATSRQVTFSKRRNGLLKKA+ELSVLCDAQVSVIIFSQKGRLYEFSSSE+
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSSEF

M5XLE8 MADS-box domain-containing protein4.0e-2395.16Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSSEF
        MVRGK+EMKRIENATSRQVTFSKRRNGLLKKA+ELSVLCDAQVSVIIFSQKGRLYEFSSSE+
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSSEF

SwissProt top hitse value%identityAlignment
O64645 MADS-box protein SOC15.5e-2286.67Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSS
        MVRGK +MKRIENATSRQVTFSKRRNGLLKKA+ELSVLCDA+VS+IIFS KG+LYEF+SS
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSS

O82743 Agamous-like MADS-box protein AGL192.7e-2179.37Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSSEFS
        MVRGK EMKRIENATSRQVTFSKRRNGLLKKA+ELSVLCDA+V+++IFS + +LYEFSSS  +
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSSEFS

Q38838 Agamous-like MADS-box protein AGL145.5e-2286.67Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSS
        MVRGK EMKRIENATSRQVTFSKRRNGLLKKA+ELSVLCDA+V++IIFS +G+LYEFSSS
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSS

Q9FIS1 MADS-box protein AGL423.4e-2490.16Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSSE
        MVRGK+EMK+IENATSRQVTFSKRRNGLLKKAYELSVLCDAQ+S+IIFSQ+GRLYEFSSS+
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSSE

Q9FLH5 MADS-box protein AGL723.6e-2180.33Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSSE
        MVRGK+E+K+IEN TSRQVTFSKRR+GL KKA+ELSVLCDAQV+ +IFSQKGRLYEF+SS+
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSSE

Arabidopsis top hitse value%identityAlignment
AT2G45660.1 AGAMOUS-like 203.9e-2386.67Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSS
        MVRGK +MKRIENATSRQVTFSKRRNGLLKKA+ELSVLCDA+VS+IIFS KG+LYEF+SS
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSS

AT5G62165.1 AGAMOUS-like 422.4e-2590.16Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSSE
        MVRGK+EMK+IENATSRQVTFSKRRNGLLKKAYELSVLCDAQ+S+IIFSQ+GRLYEFSSS+
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSSE

AT5G62165.2 AGAMOUS-like 422.4e-2590.16Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSSE
        MVRGK+EMK+IENATSRQVTFSKRRNGLLKKAYELSVLCDAQ+S+IIFSQ+GRLYEFSSS+
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSSE

AT5G62165.3 AGAMOUS-like 422.4e-2590.16Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSSE
        MVRGK+EMK+IENATSRQVTFSKRRNGLLKKAYELSVLCDAQ+S+IIFSQ+GRLYEFSSS+
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSSE

AT5G62165.4 AGAMOUS-like 422.4e-2590.16Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSSE
        MVRGK+EMK+IENATSRQVTFSKRRNGLLKKAYELSVLCDAQ+S+IIFSQ+GRLYEFSSS+
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGGGGAAAAGTGGAAATGAAAAGGATAGAAAATGCGACAAGTCGTCAAGTGACATTCTCAAAGAGGCGAAATGGGCTTCTGAAGAAGGCGTATGAGCTATCTGT
TCTTTGCGATGCTCAAGTTTCTGTAATCATTTTCTCTCAAAAAGGAAGGCTCTATGAGTTCTCAAGCTCCGAATTTTCCCTCCTTTCACCTCCTGGGAAACCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGAGGGGAAAAGTGGAAATGAAAAGGATAGAAAATGCGACAAGTCGTCAAGTGACATTCTCAAAGAGGCGAAATGGGCTTCTGAAGAAGGCGTATGAGCTATCTGT
TCTTTGCGATGCTCAAGTTTCTGTAATCATTTTCTCTCAAAAAGGAAGGCTCTATGAGTTCTCAAGCTCCGAATTTTCCCTCCTTTCACCTCCTGGGAAACCGTAG
Protein sequenceShow/hide protein sequence
MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQVSVIIFSQKGRLYEFSSSEFSLLSPPGKP