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Lag0032124 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032124
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionmitochondrial thiamine diphosphate carrier 2-like
Genome locationchr11:25349213..25352121
RNA-Seq ExpressionLag0032124
SyntenyLag0032124
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR018108 - Mitochondrial substrate/solute carrier
IPR023395 - Mitochondrial carrier domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593963.1 Mitochondrial thiamine diphosphate carrier 2, partial [Cucurbita argyrosperma subsp. sororia]2.4e-0958.9Show/hide
Query:  SGAIAGCVSRMVTSPLDPIKISIFLWHSLADPERGSTGANNLWALVVQRSLSRPSKYTSMFQATHDIFKEEGL
        +GAIAGCVSR VTSPLD IKI            +        WAL VQRSLS PSKYT M QAT DIF+EEGL
Subjt:  SGAIAGCVSRMVTSPLDPIKISIFLWHSLADPERGSTGANNLWALVVQRSLSRPSKYTSMFQATHDIFKEEGL

XP_004143086.1 mitochondrial thiamine diphosphate carrier 2 isoform X1 [Cucumis sativus]1.8e-0960.27Show/hide
Query:  SGAIAGCVSRMVTSPLDPIKISIFLWHSLADPERGSTGANNLWALVVQRSLSRPSKYTSMFQATHDIFKEEGL
        +GAIAGCVSR VTSPLD IKI            +        WAL VQRSLS PSKYT M QAT DIFKEEGL
Subjt:  SGAIAGCVSRMVTSPLDPIKISIFLWHSLADPERGSTGANNLWALVVQRSLSRPSKYTSMFQATHDIFKEEGL

XP_022138781.1 mitochondrial thiamine diphosphate carrier 2-like isoform X1 [Momordica charantia]1.1e-0958.9Show/hide
Query:  SGAIAGCVSRMVTSPLDPIKISIFLWHSLADPERGSTGANNLWALVVQRSLSRPSKYTSMFQATHDIFKEEGL
        +GAIAGC+SR VTSPLD IKI            +        WAL VQRSLS PSKYT MFQAT DIF+EEGL
Subjt:  SGAIAGCVSRMVTSPLDPIKISIFLWHSLADPERGSTGANNLWALVVQRSLSRPSKYTSMFQATHDIFKEEGL

XP_023000201.1 mitochondrial thiamine diphosphate carrier 2-like isoform X1 [Cucurbita maxima]2.4e-0958.9Show/hide
Query:  SGAIAGCVSRMVTSPLDPIKISIFLWHSLADPERGSTGANNLWALVVQRSLSRPSKYTSMFQATHDIFKEEGL
        +GAIAGCVSR VTSPLD IKI            +        WAL VQRSLS PSKYT M QAT DIF+EEGL
Subjt:  SGAIAGCVSRMVTSPLDPIKISIFLWHSLADPERGSTGANNLWALVVQRSLSRPSKYTSMFQATHDIFKEEGL

XP_031743504.1 mitochondrial thiamine diphosphate carrier 2 isoform X2 [Cucumis sativus]1.8e-0960.27Show/hide
Query:  SGAIAGCVSRMVTSPLDPIKISIFLWHSLADPERGSTGANNLWALVVQRSLSRPSKYTSMFQATHDIFKEEGL
        +GAIAGCVSR VTSPLD IKI            +        WAL VQRSLS PSKYT M QAT DIFKEEGL
Subjt:  SGAIAGCVSRMVTSPLDPIKISIFLWHSLADPERGSTGANNLWALVVQRSLSRPSKYTSMFQATHDIFKEEGL

TrEMBL top hitse value%identityAlignment
A0A1S3C8I0 mitochondrial thiamine pyrophosphate carrier-like isoform X22.0e-0958.9Show/hide
Query:  SGAIAGCVSRMVTSPLDPIKISIFLWHSLADPERGSTGANNLWALVVQRSLSRPSKYTSMFQATHDIFKEEGL
        +GAIAGCVSR VTSPLD IKI            +        WAL VQRSLS PSKYT M QAT DIF+EEGL
Subjt:  SGAIAGCVSRMVTSPLDPIKISIFLWHSLADPERGSTGANNLWALVVQRSLSRPSKYTSMFQATHDIFKEEGL

A0A6J1CAQ3 mitochondrial thiamine diphosphate carrier 2-like isoform X15.2e-1058.9Show/hide
Query:  SGAIAGCVSRMVTSPLDPIKISIFLWHSLADPERGSTGANNLWALVVQRSLSRPSKYTSMFQATHDIFKEEGL
        +GAIAGC+SR VTSPLD IKI            +        WAL VQRSLS PSKYT MFQAT DIF+EEGL
Subjt:  SGAIAGCVSRMVTSPLDPIKISIFLWHSLADPERGSTGANNLWALVVQRSLSRPSKYTSMFQATHDIFKEEGL

A0A6J1ERL7 mitochondrial thiamine diphosphate carrier 2-like isoform X11.2e-0958.9Show/hide
Query:  SGAIAGCVSRMVTSPLDPIKISIFLWHSLADPERGSTGANNLWALVVQRSLSRPSKYTSMFQATHDIFKEEGL
        +GAIAGCVSR VTSPLD IKI            +        WAL VQRSLS PSKYT M QAT DIF+EEGL
Subjt:  SGAIAGCVSRMVTSPLDPIKISIFLWHSLADPERGSTGANNLWALVVQRSLSRPSKYTSMFQATHDIFKEEGL

A0A6J1KF80 mitochondrial thiamine diphosphate carrier 2-like isoform X11.2e-0958.9Show/hide
Query:  SGAIAGCVSRMVTSPLDPIKISIFLWHSLADPERGSTGANNLWALVVQRSLSRPSKYTSMFQATHDIFKEEGL
        +GAIAGCVSR VTSPLD IKI            +        WAL VQRSLS PSKYT M QAT DIF+EEGL
Subjt:  SGAIAGCVSRMVTSPLDPIKISIFLWHSLADPERGSTGANNLWALVVQRSLSRPSKYTSMFQATHDIFKEEGL

A0A6J1KXM6 mitochondrial thiamine diphosphate carrier 2-like isoform X12.0e-0960.27Show/hide
Query:  SGAIAGCVSRMVTSPLDPIKISIFLWHSLADPERGSTGANNLWALVVQRSLSRPSKYTSMFQATHDIFKEEGL
        +GAIAGCVSR VTSPLD IKI    +    +P          WAL VQRSLS PSKYT M QAT DIF+EEGL
Subjt:  SGAIAGCVSRMVTSPLDPIKISIFLWHSLADPERGSTGANNLWALVVQRSLSRPSKYTSMFQATHDIFKEEGL

SwissProt top hitse value%identityAlignment
A0A1D6N272 Mitochondrial thiamine diphosphate carrier 26.7e-0743.24Show/hide
Query:  LSGAIAGCVSRMVTSPLDPIKISIFLWHSLADPERGSTGANNLWALVVQRSLSRPSKYTSMFQATHDIFKEEGL
        L+GAI+G +SR VTSPLD IKI            +        W  +++R +  PSKYT + QAT DI +EEGL
Subjt:  LSGAIAGCVSRMVTSPLDPIKISIFLWHSLADPERGSTGANNLWALVVQRSLSRPSKYTSMFQATHDIFKEEGL

B4FIJ0 Mitochondrial thiamine diphosphate carrier 18.8e-0743.24Show/hide
Query:  LSGAIAGCVSRMVTSPLDPIKISIFLWHSLADPERGSTGANNLWALVVQRSLSRPSKYTSMFQATHDIFKEEGL
        L+GAI+G +SR VTSPLD IKI            +        W  +++R +  PSKYT + QAT DI +EEGL
Subjt:  LSGAIAGCVSRMVTSPLDPIKISIFLWHSLADPERGSTGANNLWALVVQRSLSRPSKYTSMFQATHDIFKEEGL

Q8RXZ9 Mitochondrial thiamine diphosphate carrier 12.8e-0541.03Show/hide
Query:  SGAIAGCVSRMVTSPLDPIKISIFLWHSLADPERGSTGANNLWALVVQRSLSRPSKYTSMFQATHDIFKEEGLRDIHR
        +G +AG +SRMVTSPLD IKI            +        WAL  + S  +P KY  +F+ T DIF+EEGL    R
Subjt:  SGAIAGCVSRMVTSPLDPIKISIFLWHSLADPERGSTGANNLWALVVQRSLSRPSKYTSMFQATHDIFKEEGLRDIHR

Q9FI73 Mitochondrial thiamine diphosphate carrier 21.4e-0747.44Show/hide
Query:  SGAIAGCVSRMVTSPLDPIKISIFLWHSLADPERGSTGANNLWALVVQRSLSRPSKYTSMFQATHDIFKEEGLRDIHR
        +GAI+G VSR VTSPLD IKI            +        W L V+ +LS  SKYT M QAT DIF+EEG R   R
Subjt:  SGAIAGCVSRMVTSPLDPIKISIFLWHSLADPERGSTGANNLWALVVQRSLSRPSKYTSMFQATHDIFKEEGLRDIHR

Arabidopsis top hitse value%identityAlignment
AT3G21390.1 Mitochondrial substrate carrier family protein2.0e-0641.03Show/hide
Query:  SGAIAGCVSRMVTSPLDPIKISIFLWHSLADPERGSTGANNLWALVVQRSLSRPSKYTSMFQATHDIFKEEGLRDIHR
        +G +AG +SRMVTSPLD IKI            +        WAL  + S  +P KY  +F+ T DIF+EEGL    R
Subjt:  SGAIAGCVSRMVTSPLDPIKISIFLWHSLADPERGSTGANNLWALVVQRSLSRPSKYTSMFQATHDIFKEEGLRDIHR

AT5G48970.1 Mitochondrial substrate carrier family protein9.6e-0947.44Show/hide
Query:  SGAIAGCVSRMVTSPLDPIKISIFLWHSLADPERGSTGANNLWALVVQRSLSRPSKYTSMFQATHDIFKEEGLRDIHR
        +GAI+G VSR VTSPLD IKI            +        W L V+ +LS  SKYT M QAT DIF+EEG R   R
Subjt:  SGAIAGCVSRMVTSPLDPIKISIFLWHSLADPERGSTGANNLWALVVQRSLSRPSKYTSMFQATHDIFKEEGLRDIHR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGTCGCATTTCATTTTGCCTTCCCAGAAATGCGGTTGCATTTCTGGGAAATCCCAGCTTTTCCTCTCTGGCGCGATTGCTGGTTGCGTATCTCGAATGGTCACGTC
TCCTCTCGACCCAATTAAGATCAGCATCTTTCTATGGCATTCTCTTGCAGATCCGGAAAGAGGTTCAACTGGAGCCAACAACTTATGGGCTTTGGTGGTTCAAAGAAGTT
TATCCAGGCCATCAAAGTACACTAGCATGTTCCAAGCAACACATGATATTTTCAAAGAGGAAGGCTTACGGGACATCCATAGACCAAGGGATAGCATATGTGTTGATGTT
GGTGGCATTGGCACTCACATATCTCATCCCTTATCCAATAGCTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGGTCGCATTTCATTTTGCCTTCCCAGAAATGCGGTTGCATTTCTGGGAAATCCCAGCTTTTCCTCTCTGGCGCGATTGCTGGTTGCGTATCTCGAATGGTCACGTC
TCCTCTCGACCCAATTAAGATCAGCATCTTTCTATGGCATTCTCTTGCAGATCCGGAAAGAGGTTCAACTGGAGCCAACAACTTATGGGCTTTGGTGGTTCAAAGAAGTT
TATCCAGGCCATCAAAGTACACTAGCATGTTCCAAGCAACACATGATATTTTCAAAGAGGAAGGCTTACGGGACATCCATAGACCAAGGGATAGCATATGTGTTGATGTT
GGTGGCATTGGCACTCACATATCTCATCCCTTATCCAATAGCTTCTAA
Protein sequenceShow/hide protein sequence
MRSHFILPSQKCGCISGKSQLFLSGAIAGCVSRMVTSPLDPIKISIFLWHSLADPERGSTGANNLWALVVQRSLSRPSKYTSMFQATHDIFKEEGLRDIHRPRDSICVDV
GGIGTHISHPLSNSF