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Lag0032126 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032126
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag/pol protein
Genome locationchr11:25385413..25385748
RNA-Seq ExpressionLag0032126
SyntenyLag0032126
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032020.1 gag/pol protein [Cucumis melo var. makuwa]1.8e-2157.38Show/hide
Query:  SHVAFIMESLSKSFLQFRSNAMMNKIIFNLTSLLNELQLYYSLLKSKGQVEGEANVAHSKRKFEKDSTSGTKVVASS--SKKTQKKKGD-----------
        S V+FI+ESL +SFLQFRSNA+MNKI + LT+LLNELQ + SL+K KGQ +GEANVA S RKF + STSGTK + SS  SKK +KKKG            
Subjt:  SHVAFIMESLSKSFLQFRSNAMMNKIIFNLTSLLNELQLYYSLLKSKGQVEGEANVAHSKRKFEKDSTSGTKVVASS--SKKTQKKKGD-----------

Query:  --------KGKCFHCNMDGHWK
                KG CFHCN +GHWK
Subjt:  --------KGKCFHCNMDGHWK

KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]1.8e-2157.38Show/hide
Query:  SHVAFIMESLSKSFLQFRSNAMMNKIIFNLTSLLNELQLYYSLLKSKGQVEGEANVAHSKRKFEKDSTSGTKVVASSS--KKTQKKKGD-----------
        S V+FI+ESL +SFLQFRSNA+MNKI + LT+LLNELQ + SL+K KGQ +GEANVA S RKF + STSGTK + SSS  KK +KKKG            
Subjt:  SHVAFIMESLSKSFLQFRSNAMMNKIIFNLTSLLNELQLYYSLLKSKGQVEGEANVAHSKRKFEKDSTSGTKVVASSS--KKTQKKKGD-----------

Query:  --------KGKCFHCNMDGHWK
                KG CFHCN +GHWK
Subjt:  --------KGKCFHCNMDGHWK

KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]1.8e-2157.38Show/hide
Query:  SHVAFIMESLSKSFLQFRSNAMMNKIIFNLTSLLNELQLYYSLLKSKGQVEGEANVAHSKRKFEKDSTSGTKVVASSS--KKTQKKKGD-----------
        S V+FI+ESL +SFLQFRSNA+MNKI + LT+LLNELQ + SL+K KGQ +GEANVA S RKF + STSGTK + SSS  KK +KKKG            
Subjt:  SHVAFIMESLSKSFLQFRSNAMMNKIIFNLTSLLNELQLYYSLLKSKGQVEGEANVAHSKRKFEKDSTSGTKVVASSS--KKTQKKKGD-----------

Query:  --------KGKCFHCNMDGHWK
                KG CFHCN +GHWK
Subjt:  --------KGKCFHCNMDGHWK

KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]1.8e-2157.38Show/hide
Query:  SHVAFIMESLSKSFLQFRSNAMMNKIIFNLTSLLNELQLYYSLLKSKGQVEGEANVAHSKRKFEKDSTSGTKVVASSS--KKTQKKKGD-----------
        S V+FI+ESL +SFLQFRSNA+MNKI + LT+LLNELQ + SL+K KGQ +GEANVA S RKF + STSGTK + SSS  KK +KKKG            
Subjt:  SHVAFIMESLSKSFLQFRSNAMMNKIIFNLTSLLNELQLYYSLLKSKGQVEGEANVAHSKRKFEKDSTSGTKVVASSS--KKTQKKKGD-----------

Query:  --------KGKCFHCNMDGHWK
                KG CFHCN +GHWK
Subjt:  --------KGKCFHCNMDGHWK

TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]1.8e-2157.38Show/hide
Query:  SHVAFIMESLSKSFLQFRSNAMMNKIIFNLTSLLNELQLYYSLLKSKGQVEGEANVAHSKRKFEKDSTSGTKVVASSS--KKTQKKKGD-----------
        S V+FI+ESL +SFLQFRSNA+MNKI + LT+LLNELQ + SL+K KGQ +GEANVA S RKF + STSGTK + SSS  KK +KKKG            
Subjt:  SHVAFIMESLSKSFLQFRSNAMMNKIIFNLTSLLNELQLYYSLLKSKGQVEGEANVAHSKRKFEKDSTSGTKVVASSS--KKTQKKKGD-----------

Query:  --------KGKCFHCNMDGHWK
                KG CFHCN +GHWK
Subjt:  --------KGKCFHCNMDGHWK

TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein8.9e-2257.38Show/hide
Query:  SHVAFIMESLSKSFLQFRSNAMMNKIIFNLTSLLNELQLYYSLLKSKGQVEGEANVAHSKRKFEKDSTSGTKVVASSS--KKTQKKKGD-----------
        S V+FI+ESL +SFLQFRSNA+MNKI + LT+LLNELQ + SL+K KGQ +GEANVA S RKF + STSGTK + SSS  KK +KKKG            
Subjt:  SHVAFIMESLSKSFLQFRSNAMMNKIIFNLTSLLNELQLYYSLLKSKGQVEGEANVAHSKRKFEKDSTSGTKVVASSS--KKTQKKKGD-----------

Query:  --------KGKCFHCNMDGHWK
                KG CFHCN +GHWK
Subjt:  --------KGKCFHCNMDGHWK

A0A5A7TU93 Gag/pol protein8.9e-2257.38Show/hide
Query:  SHVAFIMESLSKSFLQFRSNAMMNKIIFNLTSLLNELQLYYSLLKSKGQVEGEANVAHSKRKFEKDSTSGTKVVASSS--KKTQKKKGD-----------
        S V+FI+ESL +SFLQFRSNA+MNKI + LT+LLNELQ + SL+K KGQ +GEANVA S RKF + STSGTK + SSS  KK +KKKG            
Subjt:  SHVAFIMESLSKSFLQFRSNAMMNKIIFNLTSLLNELQLYYSLLKSKGQVEGEANVAHSKRKFEKDSTSGTKVVASSS--KKTQKKKGD-----------

Query:  --------KGKCFHCNMDGHWK
                KG CFHCN +GHWK
Subjt:  --------KGKCFHCNMDGHWK

A0A5A7TWB9 Gag/pol protein8.9e-2257.38Show/hide
Query:  SHVAFIMESLSKSFLQFRSNAMMNKIIFNLTSLLNELQLYYSLLKSKGQVEGEANVAHSKRKFEKDSTSGTKVVASSS--KKTQKKKGD-----------
        S V+FI+ESL +SFLQFRSNA+MNKI + LT+LLNELQ + SL+K KGQ +GEANVA S RKF + STSGTK + SSS  KK +KKKG            
Subjt:  SHVAFIMESLSKSFLQFRSNAMMNKIIFNLTSLLNELQLYYSLLKSKGQVEGEANVAHSKRKFEKDSTSGTKVVASSS--KKTQKKKGD-----------

Query:  --------KGKCFHCNMDGHWK
                KG CFHCN +GHWK
Subjt:  --------KGKCFHCNMDGHWK

A0A5A7V4M1 Gag/pol protein8.9e-2257.38Show/hide
Query:  SHVAFIMESLSKSFLQFRSNAMMNKIIFNLTSLLNELQLYYSLLKSKGQVEGEANVAHSKRKFEKDSTSGTKVVASSS--KKTQKKKGD-----------
        S V+FI+ESL +SFLQFRSNA+MNKI + LT+LLNELQ + SL+K KGQ +GEANVA S RKF + STSGTK + SSS  KK +KKKG            
Subjt:  SHVAFIMESLSKSFLQFRSNAMMNKIIFNLTSLLNELQLYYSLLKSKGQVEGEANVAHSKRKFEKDSTSGTKVVASSS--KKTQKKKGD-----------

Query:  --------KGKCFHCNMDGHWK
                KG CFHCN +GHWK
Subjt:  --------KGKCFHCNMDGHWK

A0A5D3CPJ6 Gag/pol protein8.9e-2257.38Show/hide
Query:  SHVAFIMESLSKSFLQFRSNAMMNKIIFNLTSLLNELQLYYSLLKSKGQVEGEANVAHSKRKFEKDSTSGTKVVASSS--KKTQKKKGD-----------
        S V+FI+ESL +SFLQFRSNA+MNKI + LT+LLNELQ + SL+K KGQ +GEANVA S RKF + STSGTK + SSS  KK +KKKG            
Subjt:  SHVAFIMESLSKSFLQFRSNAMMNKIIFNLTSLLNELQLYYSLLKSKGQVEGEANVAHSKRKFEKDSTSGTKVVASSS--KKTQKKKGD-----------

Query:  --------KGKCFHCNMDGHWK
                KG CFHCN +GHWK
Subjt:  --------KGKCFHCNMDGHWK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTAGGGAATTTCAATCCTACACGTAGTCATGTTGCTTTCATCATGGAATCTCTTTCGAAGAGTTTCCTACAGTTTCGCAGCAATGCGATGATGAACAAGATTAT
CTTCAACCTTACAAGCCTCCTGAATGAGCTACAACTCTATTACTCTCTTCTAAAAAGCAAGGGACAGGTAGAAGGAGAGGCAAATGTTGCCCACTCCAAGAGAAAGTTTG
AGAAGGATTCAACTTCTGGAACTAAAGTTGTGGCATCTTCTTCAAAGAAAACTCAGAAGAAGAAAGGAGACAAGGGCAAGTGCTTCCACTGTAATATGGATGGGCACTGG
AAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATTAGGGAATTTCAATCCTACACGTAGTCATGTTGCTTTCATCATGGAATCTCTTTCGAAGAGTTTCCTACAGTTTCGCAGCAATGCGATGATGAACAAGATTAT
CTTCAACCTTACAAGCCTCCTGAATGAGCTACAACTCTATTACTCTCTTCTAAAAAGCAAGGGACAGGTAGAAGGAGAGGCAAATGTTGCCCACTCCAAGAGAAAGTTTG
AGAAGGATTCAACTTCTGGAACTAAAGTTGTGGCATCTTCTTCAAAGAAAACTCAGAAGAAGAAAGGAGACAAGGGCAAGTGCTTCCACTGTAATATGGATGGGCACTGG
AAATGA
Protein sequenceShow/hide protein sequence
MELGNFNPTRSHVAFIMESLSKSFLQFRSNAMMNKIIFNLTSLLNELQLYYSLLKSKGQVEGEANVAHSKRKFEKDSTSGTKVVASSSKKTQKKKGDKGKCFHCNMDGHW
K