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Lag0032139 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032139
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr11:25859597..25860142
RNA-Seq ExpressionLag0032139
SyntenyLag0032139
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN71553.1 hypothetical protein VITISV_034738 [Vitis vinifera]1.1e-0455.32Show/hide
Query:  AMLAEPKRFKTALQMPHWKVAMEEEMKALQENNTWNLVDPPANVNII
        ++  EP+  K ALQ P+WKVAME+E +AL +N TW+LV PP+N  II
Subjt:  AMLAEPKRFKTALQMPHWKVAMEEEMKALQENNTWNLVDPPANVNII

CAN73795.1 hypothetical protein VITISV_036649 [Vitis vinifera]5.2e-0557.45Show/hide
Query:  AMLAEPKRFKTALQMPHWKVAMEEEMKALQENNTWNLVDPPANVNII
        +++AEP   K ALQ P+WK+AME E +AL +N TW+LV PP+NV II
Subjt:  AMLAEPKRFKTALQMPHWKVAMEEEMKALQENNTWNLVDPPANVNII

TXG53642.1 hypothetical protein EZV62_018898 [Acer yangbiense]8.8e-0531.45Show/hide
Query:  ITETPEEINSNQQTSQLQNLFDRNYNTTSSSMPTNASIDVLHTQQATQLQSLYVNYHNNISDNRYKQITLQHRPTPSNQQRELTLHDYKKKKLNDNSQLK
        I E+ EEI  N ++   Q  FDR+ N        N  +  + +     L++   N  N++  N +K     H+  PS+Q     +    +KKLN N  L 
Subjt:  ITETPEEINSNQQTSQLQNLFDRNYNTTSSSMPTNASIDVLHTQQATQLQSLYVNYHNNISDNRYKQITLQHRPTPSNQQRELTLHDYKKKKLNDNSQLK

Query:  SLLHQETHSSRHKQQNQAML-----AEPKRFKTALQMPHWKVAMEEEMKALQENNTWNL
          L  E    R ++ + ++L      EPK +K AL +P W  AM+EE+KAL +++TWNL
Subjt:  SLLHQETHSSRHKQQNQAML-----AEPKRFKTALQMPHWKVAMEEEMKALQENNTWNL

XP_037474264.1 26S proteasome non-ATPase regulatory subunit 13 homolog B-like [Triticum dicoccoides]8.8e-0552.27Show/hide
Query:  AEPKRFKTALQMPHWKVAMEEEMKALQENNTWNLVDPPANVNII
        AEP+ F+ AL +PHW+ AME+E +AL++N+TW LV P + +N+I
Subjt:  AEPKRFKTALQMPHWKVAMEEEMKALQENNTWNLVDPPANVNII

XP_040255764.1 uncharacterized protein LOC109778790 [Aegilops tauschii subsp. strangulata]2.3e-0553.33Show/hide
Query:  LAEPKRFKTALQMPHWKVAMEEEMKALQENNTWNLVDPPANVNII
        +AEP+ ++ A+ +PHW+ AME+E  AL +N TW LV PP+ VNII
Subjt:  LAEPKRFKTALQMPHWKVAMEEEMKALQENNTWNLVDPPANVNII

TrEMBL top hitse value%identityAlignment
A0A1S8ACY4 Reverse transcriptase RNA-dependent DNA polymerase (Fragment)8.6e-0648.39Show/hide
Query:  HSSRHKQQNQAMLA-----EPKRFKTALQMPHWKVAMEEEMKALQENNTWNLVDPPANVNII
        H  RH  +    +A     EPK FKTA++ PHW+ AM EE+ AL +NNTW+LV  P N NI+
Subjt:  HSSRHKQQNQAMLA-----EPKRFKTALQMPHWKVAMEEEMKALQENNTWNLVDPPANVNII

A0A2N9EGH4 Uncharacterized protein1.2e-0460.47Show/hide
Query:  EPKRFKTALQMPHWKVAMEEEMKALQENNTWNLVDPPANVNII
        EPKRFK+A + P W  AM+EE++ALQ+N TW LV  PAN NI+
Subjt:  EPKRFKTALQMPHWKVAMEEEMKALQENNTWNLVDPPANVNII

A0A5C7HAT9 Uncharacterized protein4.3e-0531.45Show/hide
Query:  ITETPEEINSNQQTSQLQNLFDRNYNTTSSSMPTNASIDVLHTQQATQLQSLYVNYHNNISDNRYKQITLQHRPTPSNQQRELTLHDYKKKKLNDNSQLK
        I E+ EEI  N ++   Q  FDR+ N        N  +  + +     L++   N  N++  N +K     H+  PS+Q     +    +KKLN N  L 
Subjt:  ITETPEEINSNQQTSQLQNLFDRNYNTTSSSMPTNASIDVLHTQQATQLQSLYVNYHNNISDNRYKQITLQHRPTPSNQQRELTLHDYKKKKLNDNSQLK

Query:  SLLHQETHSSRHKQQNQAML-----AEPKRFKTALQMPHWKVAMEEEMKALQENNTWNL
          L  E    R ++ + ++L      EPK +K AL +P W  AM+EE+KAL +++TWNL
Subjt:  SLLHQETHSSRHKQQNQAML-----AEPKRFKTALQMPHWKVAMEEEMKALQENNTWNL

A0A5N6MD45 Reverse transcriptase Ty1/copia-type domain-containing protein1.2e-0456.82Show/hide
Query:  AEPKRFKTALQMPHWKVAMEEEMKALQENNTWNLVDPPANVNII
        +EPK FKTA + PHW  AM EE+ AL  NNTW LV  P+  NI+
Subjt:  AEPKRFKTALQMPHWKVAMEEEMKALQENNTWNLVDPPANVNII

B4UW53 Integrase (Fragment)1.6e-0464.29Show/hide
Query:  PKRFKTALQMPHWKVAMEEEMKALQENNTWNLVDPPANVNII
        PK    ALQ P W  AM+EE KAL +NNTW LV PPAN NII
Subjt:  PKRFKTALQMPHWKVAMEEEMKALQENNTWNLVDPPANVNII

SwissProt top hitse value%identityAlignment
P92520 Uncharacterized mitochondrial protein AtMg008203.5e-0453.49Show/hide
Query:  EPKRFKTALQMPHWKVAMEEEMKALQENNTWNLVDPPANVNII
        EPK    AL+ P W  AM+EE+ AL  N TW LV PP N NI+
Subjt:  EPKRFKTALQMPHWKVAMEEEMKALQENNTWNLVDPPANVNII

Arabidopsis top hitse value%identityAlignment
ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)2.5e-0553.49Show/hide
Query:  EPKRFKTALQMPHWKVAMEEEMKALQENNTWNLVDPPANVNII
        EPK    AL+ P W  AM+EE+ AL  N TW LV PP N NI+
Subjt:  EPKRFKTALQMPHWKVAMEEEMKALQENNTWNLVDPPANVNII


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATCTCGTGACCCCGCCATGTCCAAAAGTTATAACCGTAGAAAAGCCCATAACTGAAACTCCAGAAGAAATCAACTCCAATCAACAAACATCACAACTTCAAAATTT
GTTTGATAGAAACTACAATACCACATCAAGCAGCATGCCAACTAATGCAAGTATTGATGTTTTACACACTCAACAAGCCACACAACTTCAAAGTTTATATGTCAACTATC
ACAACAACATATCAGATAACAGGTACAAACAAATCACACTCCAACACAGGCCCACTCCTTCAAACCAACAAAGAGAACTCACACTCCATGATTACAAGAAAAAAAAGCTT
AATGACAACTCTCAACTTAAATCATTGTTGCACCAAGAAACTCATAGCAGTAGGCACAAGCAGCAAAATCAAGCCATGCTAGCTGAACCAAAACGCTTCAAAACTGCCCT
ACAGATGCCTCATTGGAAAGTTGCTATGGAGGAGGAAATGAAAGCTCTTCAAGAAAACAACACTTGGAACCTAGTTGATCCTCCCGCTAATGTCAACATCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATCTCGTGACCCCGCCATGTCCAAAAGTTATAACCGTAGAAAAGCCCATAACTGAAACTCCAGAAGAAATCAACTCCAATCAACAAACATCACAACTTCAAAATTT
GTTTGATAGAAACTACAATACCACATCAAGCAGCATGCCAACTAATGCAAGTATTGATGTTTTACACACTCAACAAGCCACACAACTTCAAAGTTTATATGTCAACTATC
ACAACAACATATCAGATAACAGGTACAAACAAATCACACTCCAACACAGGCCCACTCCTTCAAACCAACAAAGAGAACTCACACTCCATGATTACAAGAAAAAAAAGCTT
AATGACAACTCTCAACTTAAATCATTGTTGCACCAAGAAACTCATAGCAGTAGGCACAAGCAGCAAAATCAAGCCATGCTAGCTGAACCAAAACGCTTCAAAACTGCCCT
ACAGATGCCTCATTGGAAAGTTGCTATGGAGGAGGAAATGAAAGCTCTTCAAGAAAACAACACTTGGAACCTAGTTGATCCTCCCGCTAATGTCAACATCATTTGA
Protein sequenceShow/hide protein sequence
MYLVTPPCPKVITVEKPITETPEEINSNQQTSQLQNLFDRNYNTTSSSMPTNASIDVLHTQQATQLQSLYVNYHNNISDNRYKQITLQHRPTPSNQQRELTLHDYKKKKL
NDNSQLKSLLHQETHSSRHKQQNQAMLAEPKRFKTALQMPHWKVAMEEEMKALQENNTWNLVDPPANVNII