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Lag0032144 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032144
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationchr11:25959399..25959769
RNA-Seq ExpressionLag0032144
SyntenyLag0032144
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR011989 - Armadillo-like helical
IPR016024 - Armadillo-type fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055206.1 U-box domain-containing protein 38-like [Cucumis melo var. makuwa]1.1e-1267.14Show/hide
Query:  FILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLRS---AARGRGTMQLYAYTI
        F+  LIDVLDGG+TESQEH  GAL SLSLDDENKMAIG+LGAL VLMNTLRS     R    + LY  T+
Subjt:  FILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLRS---AARGRGTMQLYAYTI

KAG6573037.1 U-box domain-containing protein 38, partial [Cucurbita argyrosperma subsp. sororia]1.6e-1161.11Show/hide
Query:  TSFILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLRS---AARGRGTMQLYAYTI
        + F+ PLIDVLD GS ESQEH  G+L SLSLDDENKMAIG+LG L VLMN LRS     R    + LY  T+
Subjt:  TSFILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLRS---AARGRGTMQLYAYTI

XP_004152547.1 U-box domain-containing protein 38 [Cucumis sativus]7.6e-1468.57Show/hide
Query:  FILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLRS---AARGRGTMQLYAYTI
        F+ PLIDVLDGG+TESQEH  GAL SLSLDDENKMAIG+LGAL VLMNTLRS     R    + LY  T+
Subjt:  FILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLRS---AARGRGTMQLYAYTI

XP_008438058.1 PREDICTED: U-box domain-containing protein 38-like [Cucumis melo]1.1e-1267.14Show/hide
Query:  FILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLRS---AARGRGTMQLYAYTI
        F+  LIDVLDGG+TESQEH  GAL SLSLDDENKMAIG+LGAL VLMNTLRS     R    + LY  T+
Subjt:  FILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLRS---AARGRGTMQLYAYTI

XP_038895164.1 U-box domain-containing protein 38-like [Benincasa hispida]3.8e-1367.14Show/hide
Query:  FILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLRS---AARGRGTMQLYAYTI
        F+ PLIDVLDGG+TESQEH  GAL SLS DDENKMAIG+LGAL VLMNTLRS     R    + LY  T+
Subjt:  FILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLRS---AARGRGTMQLYAYTI

TrEMBL top hitse value%identityAlignment
A0A0A0LR64 RING-type E3 ubiquitin transferase3.7e-1468.57Show/hide
Query:  FILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLRS---AARGRGTMQLYAYTI
        F+ PLIDVLDGG+TESQEH  GAL SLSLDDENKMAIG+LGAL VLMNTLRS     R    + LY  T+
Subjt:  FILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLRS---AARGRGTMQLYAYTI

A0A1S3AW21 RING-type E3 ubiquitin transferase5.3e-1367.14Show/hide
Query:  FILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLRS---AARGRGTMQLYAYTI
        F+  LIDVLDGG+TESQEH  GAL SLSLDDENKMAIG+LGAL VLMNTLRS     R    + LY  T+
Subjt:  FILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLRS---AARGRGTMQLYAYTI

A0A5A7ULP5 RING-type E3 ubiquitin transferase5.3e-1367.14Show/hide
Query:  FILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLRS---AARGRGTMQLYAYTI
        F+  LIDVLDGG+TESQEH  GAL SLSLDDENKMAIG+LGAL VLMNTLRS     R    + LY  T+
Subjt:  FILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLRS---AARGRGTMQLYAYTI

A0A5D3BJ60 RING-type E3 ubiquitin transferase5.3e-1367.14Show/hide
Query:  FILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLRS---AARGRGTMQLYAYTI
        F+  LIDVLDGG+TESQEH  GAL SLSLDDENKMAIG+LGAL VLMNTLRS     R    + LY  T+
Subjt:  FILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLRS---AARGRGTMQLYAYTI

A0A6J1K3B0 RING-type E3 ubiquitin transferase7.7e-1261.11Show/hide
Query:  TSFILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLRS---AARGRGTMQLYAYTI
        + F+ PLIDVLD GS ESQEH  G+L SLSLDDENKMAIG+LG L VLMN LRS     R    + LY  T+
Subjt:  TSFILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLRS---AARGRGTMQLYAYTI

SwissProt top hitse value%identityAlignment
Q0WUF6 U-box domain-containing protein 416.3e-1155.07Show/hide
Query:  TSFILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLRSA----ARGRGTMQLY
        + F+  LIDVL  G+TE+QEHV GAL SL+L+DENKM IGVLGA+  L++ LRS+    AR    + LY
Subjt:  TSFILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLRSA----ARGRGTMQLY

Q8VZ40 U-box domain-containing protein 142.0e-0442.59Show/hide
Query:  ILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLRSAAR
        I  +++VL  GS E++E+    L SLS+ DENK+AIG  GA+  L++ L    R
Subjt:  ILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLRSAAR

Q9FJP6 U-box domain-containing protein 381.5e-0950.7Show/hide
Query:  FILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLRSAARGR----GTMQLYAYTI
        F+  LIDVL  GS E+QEH  G + SLSL+D+NKM IGVLGAL  L++ LR+A   R      + LY  T+
Subjt:  FILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLRSAARGR----GTMQLYAYTI

Q9FL17 U-box domain-containing protein 405.0e-0854.72Show/hide
Query:  TSFILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLR
        +  + PLIDVL  GS E+QEH  G + SL+L+DENK AIGVLG L  L++ +R
Subjt:  TSFILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLR

Q9STT1 U-box domain-containing protein 398.2e-1153.62Show/hide
Query:  TSFILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLRSA----ARGRGTMQLY
        + F+  LIDVL  GSTE+QEHV+GAL SL++++ENKM IGVLGA+  L++ LRS+    AR    + LY
Subjt:  TSFILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLRSA----ARGRGTMQLY

Arabidopsis top hitse value%identityAlignment
AT3G47820.1 PLANT U-BOX 395.8e-1253.62Show/hide
Query:  TSFILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLRSA----ARGRGTMQLY
        + F+  LIDVL  GSTE+QEHV+GAL SL++++ENKM IGVLGA+  L++ LRS+    AR    + LY
Subjt:  TSFILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLRSA----ARGRGTMQLY

AT3G54850.1 plant U-box 141.4e-0542.59Show/hide
Query:  ILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLRSAAR
        I  +++VL  GS E++E+    L SLS+ DENK+AIG  GA+  L++ L    R
Subjt:  ILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLRSAAR

AT5G40140.1 RING/U-box superfamily protein with ARM repeat domain3.5e-0954.72Show/hide
Query:  TSFILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLR
        +  + PLIDVL  GS E+QEH  G + SL+L+DENK AIGVLG L  L++ +R
Subjt:  TSFILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLR

AT5G62560.1 RING/U-box superfamily protein with ARM repeat domain4.5e-1255.07Show/hide
Query:  TSFILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLRSA----ARGRGTMQLY
        + F+  LIDVL  G+TE+QEHV GAL SL+L+DENKM IGVLGA+  L++ LRS+    AR    + LY
Subjt:  TSFILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLRSA----ARGRGTMQLY

AT5G65200.1 plant U-box 381.1e-1050.7Show/hide
Query:  FILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLRSAARGR----GTMQLYAYTI
        F+  LIDVL  GS E+QEH  G + SLSL+D+NKM IGVLGAL  L++ LR+A   R      + LY  T+
Subjt:  FILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLRSAARGR----GTMQLYAYTI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACAAAGGAATTACTCGCCGCCCTACACCTCTGCTTCATCTCACTGTTATGCACGAAGGAGTCCTCTGTTTTCTTCTCCCCATTTTGTTTACATCAACGTCATTCAT
TTTGCCATTGATCGACGTGTTAGACGGCGGATCCACTGAATCACAAGAACACGTTGTCGGTGCTCTGTTAAGTTTATCCTTAGACGACGAGAACAAAATGGCGATTGGAG
TCCTCGGCGCGTTGTCGGTGTTGATGAACACACTCCGATCGGCAGCGAGAGGACGAGGAACGATGCAGCTCTATGCTTATACCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCACAAAGGAATTACTCGCCGCCCTACACCTCTGCTTCATCTCACTGTTATGCACGAAGGAGTCCTCTGTTTTCTTCTCCCCATTTTGTTTACATCAACGTCATTCAT
TTTGCCATTGATCGACGTGTTAGACGGCGGATCCACTGAATCACAAGAACACGTTGTCGGTGCTCTGTTAAGTTTATCCTTAGACGACGAGAACAAAATGGCGATTGGAG
TCCTCGGCGCGTTGTCGGTGTTGATGAACACACTCCGATCGGCAGCGAGAGGACGAGGAACGATGCAGCTCTATGCTTATACCATTTGA
Protein sequenceShow/hide protein sequence
MHKGITRRPTPLLHLTVMHEGVLCFLLPILFTSTSFILPLIDVLDGGSTESQEHVVGALLSLSLDDENKMAIGVLGALSVLMNTLRSAARGRGTMQLYAYTI