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Lag0032145 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032145
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase, RNA-dependent DNA polymerase
Genome locationchr11:25990230..25990751
RNA-Seq ExpressionLag0032145
SyntenyLag0032145
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067279.1 uncharacterized protein E6C27_scaffold418G001000 [Cucumis melo var. makuwa]1.3e-3451.16Show/hide
Query:  MSLTTGNTTTFSNPPLNQLLNQITTIRLDRGNFLLWKNLALPILRSYKLEGHLLGTKSCPSKYVTQSTTTNTAAATTIDKGALSSETQEESASGASSSTT
        +S+T   TT+F+NP LNQ+LNQ+TTI+LDRGN+LLWK LALPIL+SYKL  HL G   C  K +  +T  N +            E   E +   SSS+T
Subjt:  MSLTTGNTTTFSNPPLNQLLNQITTIRLDRGNFLLWKNLALPILRSYKLEGHLLGTKSCPSKYVTQSTTTNTAAATTIDKGALSSETQEESASGASSSTT

Query:  VELPVKPLYEAWITTDQPLLGWLYNSMTVEVATQVMGHDNAKDLWQEISNLFEIQSRAEERLSQANISTDSK
          + V P YE WITTD  LLGWLYNSMT EV  Q+MG  NAKDLW+   +LF IQSRA+E        T  K
Subjt:  VELPVKPLYEAWITTDQPLLGWLYNSMTVEVATQVMGHDNAKDLWQEISNLFEIQSRAEERLSQANISTDSK

XP_016902197.1 PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo]4.6e-3552.47Show/hide
Query:  FSNPPLNQLLNQITTIRLDRGNFLLWKNLALPILRSYKLEGHLLGTKSCPSKYVTQSTTTNTAAATTIDKGALSSETQEESASGASSSTTVELPVKPLYE
        FSNPPLNQ+LNQ+TT++LDR N+LLWK LALPIL+ YKLEGHL     CPS +V  ++++NT   T  ++GA       ++  GASSS T  + V PL+E
Subjt:  FSNPPLNQLLNQITTIRLDRGNFLLWKNLALPILRSYKLEGHLLGTKSCPSKYVTQSTTTNTAAATTIDKGALSSETQEESASGASSSTTVELPVKPLYE

Query:  AWITTDQPLLGWLYNSMTVEVATQVMGHDNAKDLWQEISNLFEIQSRAEERLSQANISTDSK
         W+TTD  LLGWLYNSMT +VA Q+MG  N +DLW    + F +QSRAEE   +  + T  K
Subjt:  AWITTDQPLLGWLYNSMTVEVATQVMGHDNAKDLWQEISNLFEIQSRAEERLSQANISTDSK

XP_016902203.1 PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo]4.6e-3552.47Show/hide
Query:  FSNPPLNQLLNQITTIRLDRGNFLLWKNLALPILRSYKLEGHLLGTKSCPSKYVTQSTTTNTAAATTIDKGALSSETQEESASGASSSTTVELPVKPLYE
        FSNPPLNQ+LNQ+TT++LDR N+LLWK LALPIL+ YKLEGHL     CPS +V  ++++NT   T  ++GA       ++  GASSS T  + V PL+E
Subjt:  FSNPPLNQLLNQITTIRLDRGNFLLWKNLALPILRSYKLEGHLLGTKSCPSKYVTQSTTTNTAAATTIDKGALSSETQEESASGASSSTTVELPVKPLYE

Query:  AWITTDQPLLGWLYNSMTVEVATQVMGHDNAKDLWQEISNLFEIQSRAEERLSQANISTDSK
         W+TTD  LLGWLYNSMT +VA Q+MG  N +DLW    + F +QSRAEE   +  + T  K
Subjt:  AWITTDQPLLGWLYNSMTVEVATQVMGHDNAKDLWQEISNLFEIQSRAEERLSQANISTDSK

XP_016902204.1 PREDICTED: uncharacterized protein LOC107991581 isoform X4 [Cucumis melo]4.6e-3552.47Show/hide
Query:  FSNPPLNQLLNQITTIRLDRGNFLLWKNLALPILRSYKLEGHLLGTKSCPSKYVTQSTTTNTAAATTIDKGALSSETQEESASGASSSTTVELPVKPLYE
        FSNPPLNQ+LNQ+TT++LDR N+LLWK LALPIL+ YKLEGHL     CPS +V  ++++NT   T  ++GA       ++  GASSS T  + V PL+E
Subjt:  FSNPPLNQLLNQITTIRLDRGNFLLWKNLALPILRSYKLEGHLLGTKSCPSKYVTQSTTTNTAAATTIDKGALSSETQEESASGASSSTTVELPVKPLYE

Query:  AWITTDQPLLGWLYNSMTVEVATQVMGHDNAKDLWQEISNLFEIQSRAEERLSQANISTDSK
         W+TTD  LLGWLYNSMT +VA Q+MG  N +DLW    + F +QSRAEE   +  + T  K
Subjt:  AWITTDQPLLGWLYNSMTVEVATQVMGHDNAKDLWQEISNLFEIQSRAEERLSQANISTDSK

XP_016902205.1 PREDICTED: uncharacterized protein LOC107991581 isoform X5 [Cucumis melo]4.6e-3552.47Show/hide
Query:  FSNPPLNQLLNQITTIRLDRGNFLLWKNLALPILRSYKLEGHLLGTKSCPSKYVTQSTTTNTAAATTIDKGALSSETQEESASGASSSTTVELPVKPLYE
        FSNPPLNQ+LNQ+TT++LDR N+LLWK LALPIL+ YKLEGHL     CPS +V  ++++NT   T  ++GA       ++  GASSS T  + V PL+E
Subjt:  FSNPPLNQLLNQITTIRLDRGNFLLWKNLALPILRSYKLEGHLLGTKSCPSKYVTQSTTTNTAAATTIDKGALSSETQEESASGASSSTTVELPVKPLYE

Query:  AWITTDQPLLGWLYNSMTVEVATQVMGHDNAKDLWQEISNLFEIQSRAEERLSQANISTDSK
         W+TTD  LLGWLYNSMT +VA Q+MG  N +DLW    + F +QSRAEE   +  + T  K
Subjt:  AWITTDQPLLGWLYNSMTVEVATQVMGHDNAKDLWQEISNLFEIQSRAEERLSQANISTDSK

TrEMBL top hitse value%identityAlignment
A0A1S4E1U6 uncharacterized protein LOC107991581 isoform X12.2e-3552.47Show/hide
Query:  FSNPPLNQLLNQITTIRLDRGNFLLWKNLALPILRSYKLEGHLLGTKSCPSKYVTQSTTTNTAAATTIDKGALSSETQEESASGASSSTTVELPVKPLYE
        FSNPPLNQ+LNQ+TT++LDR N+LLWK LALPIL+ YKLEGHL     CPS +V  ++++NT   T  ++GA       ++  GASSS T  + V PL+E
Subjt:  FSNPPLNQLLNQITTIRLDRGNFLLWKNLALPILRSYKLEGHLLGTKSCPSKYVTQSTTTNTAAATTIDKGALSSETQEESASGASSSTTVELPVKPLYE

Query:  AWITTDQPLLGWLYNSMTVEVATQVMGHDNAKDLWQEISNLFEIQSRAEERLSQANISTDSK
         W+TTD  LLGWLYNSMT +VA Q+MG  N +DLW    + F +QSRAEE   +  + T  K
Subjt:  AWITTDQPLLGWLYNSMTVEVATQVMGHDNAKDLWQEISNLFEIQSRAEERLSQANISTDSK

A0A1S4E1U9 uncharacterized protein LOC107991581 isoform X42.2e-3552.47Show/hide
Query:  FSNPPLNQLLNQITTIRLDRGNFLLWKNLALPILRSYKLEGHLLGTKSCPSKYVTQSTTTNTAAATTIDKGALSSETQEESASGASSSTTVELPVKPLYE
        FSNPPLNQ+LNQ+TT++LDR N+LLWK LALPIL+ YKLEGHL     CPS +V  ++++NT   T  ++GA       ++  GASSS T  + V PL+E
Subjt:  FSNPPLNQLLNQITTIRLDRGNFLLWKNLALPILRSYKLEGHLLGTKSCPSKYVTQSTTTNTAAATTIDKGALSSETQEESASGASSSTTVELPVKPLYE

Query:  AWITTDQPLLGWLYNSMTVEVATQVMGHDNAKDLWQEISNLFEIQSRAEERLSQANISTDSK
         W+TTD  LLGWLYNSMT +VA Q+MG  N +DLW    + F +QSRAEE   +  + T  K
Subjt:  AWITTDQPLLGWLYNSMTVEVATQVMGHDNAKDLWQEISNLFEIQSRAEERLSQANISTDSK

A0A1S4E1V2 uncharacterized protein LOC107991581 isoform X32.2e-3552.47Show/hide
Query:  FSNPPLNQLLNQITTIRLDRGNFLLWKNLALPILRSYKLEGHLLGTKSCPSKYVTQSTTTNTAAATTIDKGALSSETQEESASGASSSTTVELPVKPLYE
        FSNPPLNQ+LNQ+TT++LDR N+LLWK LALPIL+ YKLEGHL     CPS +V  ++++NT   T  ++GA       ++  GASSS T  + V PL+E
Subjt:  FSNPPLNQLLNQITTIRLDRGNFLLWKNLALPILRSYKLEGHLLGTKSCPSKYVTQSTTTNTAAATTIDKGALSSETQEESASGASSSTTVELPVKPLYE

Query:  AWITTDQPLLGWLYNSMTVEVATQVMGHDNAKDLWQEISNLFEIQSRAEERLSQANISTDSK
         W+TTD  LLGWLYNSMT +VA Q+MG  N +DLW    + F +QSRAEE   +  + T  K
Subjt:  AWITTDQPLLGWLYNSMTVEVATQVMGHDNAKDLWQEISNLFEIQSRAEERLSQANISTDSK

A0A1S4E2K3 uncharacterized protein LOC107991581 isoform X52.2e-3552.47Show/hide
Query:  FSNPPLNQLLNQITTIRLDRGNFLLWKNLALPILRSYKLEGHLLGTKSCPSKYVTQSTTTNTAAATTIDKGALSSETQEESASGASSSTTVELPVKPLYE
        FSNPPLNQ+LNQ+TT++LDR N+LLWK LALPIL+ YKLEGHL     CPS +V  ++++NT   T  ++GA       ++  GASSS T  + V PL+E
Subjt:  FSNPPLNQLLNQITTIRLDRGNFLLWKNLALPILRSYKLEGHLLGTKSCPSKYVTQSTTTNTAAATTIDKGALSSETQEESASGASSSTTVELPVKPLYE

Query:  AWITTDQPLLGWLYNSMTVEVATQVMGHDNAKDLWQEISNLFEIQSRAEERLSQANISTDSK
         W+TTD  LLGWLYNSMT +VA Q+MG  N +DLW    + F +QSRAEE   +  + T  K
Subjt:  AWITTDQPLLGWLYNSMTVEVATQVMGHDNAKDLWQEISNLFEIQSRAEERLSQANISTDSK

A0A5A7VPY0 Uncharacterized protein6.4e-3551.16Show/hide
Query:  MSLTTGNTTTFSNPPLNQLLNQITTIRLDRGNFLLWKNLALPILRSYKLEGHLLGTKSCPSKYVTQSTTTNTAAATTIDKGALSSETQEESASGASSSTT
        +S+T   TT+F+NP LNQ+LNQ+TTI+LDRGN+LLWK LALPIL+SYKL  HL G   C  K +  +T  N +            E   E +   SSS+T
Subjt:  MSLTTGNTTTFSNPPLNQLLNQITTIRLDRGNFLLWKNLALPILRSYKLEGHLLGTKSCPSKYVTQSTTTNTAAATTIDKGALSSETQEESASGASSSTT

Query:  VELPVKPLYEAWITTDQPLLGWLYNSMTVEVATQVMGHDNAKDLWQEISNLFEIQSRAEERLSQANISTDSK
          + V P YE WITTD  LLGWLYNSMT EV  Q+MG  NAKDLW+   +LF IQSRA+E        T  K
Subjt:  VELPVKPLYEAWITTDQPLLGWLYNSMTVEVATQVMGHDNAKDLWQEISNLFEIQSRAEERLSQANISTDSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTTAACGACCGGAAATACCACTACATTTAGTAACCCTCCACTCAATCAATTGCTTAATCAGATTACTACGATTAGGCTAGATAGAGGAAATTTCTTGTTGTGGAA
AAACCTAGCCCTTCCGATCCTGAGGAGCTACAAACTTGAGGGTCATCTACTGGGCACAAAATCATGTCCTTCGAAGTATGTTACTCAATCCACAACCACTAATACAGCTG
CAGCAACTACTATTGATAAAGGAGCTTTAAGTTCAGAAACGCAAGAAGAAAGTGCATCAGGAGCTTCAAGCTCCACCACTGTTGAATTACCAGTCAAACCGCTCTATGAA
GCGTGGATTACGACTGACCAACCCTTATTAGGTTGGCTCTACAATTCAATGACAGTAGAAGTAGCTACACAAGTTATGGGTCACGATAATGCTAAAGATCTGTGGCAAGA
AATCAGTAATCTCTTCGAGATTCAATCCAGAGCAGAAGAAAGACTATCTCAGGCAAATATTTCAACAGACTCGAAAAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTTAACGACCGGAAATACCACTACATTTAGTAACCCTCCACTCAATCAATTGCTTAATCAGATTACTACGATTAGGCTAGATAGAGGAAATTTCTTGTTGTGGAA
AAACCTAGCCCTTCCGATCCTGAGGAGCTACAAACTTGAGGGTCATCTACTGGGCACAAAATCATGTCCTTCGAAGTATGTTACTCAATCCACAACCACTAATACAGCTG
CAGCAACTACTATTGATAAAGGAGCTTTAAGTTCAGAAACGCAAGAAGAAAGTGCATCAGGAGCTTCAAGCTCCACCACTGTTGAATTACCAGTCAAACCGCTCTATGAA
GCGTGGATTACGACTGACCAACCCTTATTAGGTTGGCTCTACAATTCAATGACAGTAGAAGTAGCTACACAAGTTATGGGTCACGATAATGCTAAAGATCTGTGGCAAGA
AATCAGTAATCTCTTCGAGATTCAATCCAGAGCAGAAGAAAGACTATCTCAGGCAAATATTTCAACAGACTCGAAAAGGTAA
Protein sequenceShow/hide protein sequence
MSLTTGNTTTFSNPPLNQLLNQITTIRLDRGNFLLWKNLALPILRSYKLEGHLLGTKSCPSKYVTQSTTTNTAAATTIDKGALSSETQEESASGASSSTTVELPVKPLYE
AWITTDQPLLGWLYNSMTVEVATQVMGHDNAKDLWQEISNLFEIQSRAEERLSQANISTDSKR