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Lag0032149 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032149
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr11:26130911..26131723
RNA-Seq ExpressionLag0032149
SyntenyLag0032149
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150858.1 uncharacterized protein LOC111018902 [Momordica charantia]9.2e-3847.78Show/hide
Query:  ERLRSDPGGRNKNKYCMFHGDHDHTTRECIQLRDEIETLIQEGYLKEFVGQDRG------------------KRPLPTE-QEREVAGIHHPHNDELVVAL
        ER+++ P  R K +YC FH DH H T++C  L++E+E LIQ GYLKE+V   +                   ++P   E  E EV  I HPHND LV+ L
Subjt:  ERLRSDPGGRNKNKYCMFHGDHDHTTRECIQLRDEIETLIQEGYLKEFVGQDRG------------------KRPLPTE-QEREVAGIHHPHNDELVVAL

Query:  TVANVKVHRILIDGGSSVDVLSTVAFEAMKLGSDRLRPILTPLVEFGGEKVSPRGRFELPVTFGEGPQTVTRLVNFLVVD
         +AN KVH IL+DGGSS D++S  A++ M LG   L+    PLV FGGE V P GR ELPVTFG GP+++T++V+FLVVD
Subjt:  TVANVKVHRILIDGGSSVDVLSTVAFEAMKLGSDRLRPILTPLVEFGGEKVSPRGRFELPVTFGEGPQTVTRLVNFLVVD

XP_022155873.1 uncharacterized protein LOC111022886 [Momordica charantia]1.9e-3544.75Show/hide
Query:  ERLRSDPGGRNKNKYCMFHGDHDHTTRECIQLRDEIETLIQEGYLKEFV--------GQDRGKRPL----------PTE---QEREVAGIHHPHNDELVV
        ER+++ P  R+K +Y +FH DH H T++C  L++E+E LI+ GYLKE+V        G++    P+          P +    E E   + HPHND LV+
Subjt:  ERLRSDPGGRNKNKYCMFHGDHDHTTRECIQLRDEIETLIQEGYLKEFV--------GQDRGKRPL----------PTE---QEREVAGIHHPHNDELVV

Query:  ALTVANVKVHRILIDGGSSVDVLSTVAFEAMKLGSDRLRPILTPLVEFGGEKVSPRGRFELPVTFGEGPQTVTRLVNFLVV
         L +AN KVHRIL+DGGSS  ++S  A++AM LG   L+    PLV FGGE+V P GR ELPV FG GP+++ ++V+FLVV
Subjt:  ALTVANVKVHRILIDGGSSVDVLSTVAFEAMKLGSDRLRPILTPLVEFGGEKVSPRGRFELPVTFGEGPQTVTRLVNFLVV

XP_022156748.1 uncharacterized protein LOC111023587 [Momordica charantia]3.3e-3545.65Show/hide
Query:  ERLRSDPGGRNKNKYCMFHGDHDHTTRECIQLRDEIETLIQEGYLKEFVGQDRGK----------------------RPLPTE-QEREVAGIHHPHNDEL
        ER+++    R+K +YC+FH DHDH T++C  L++E+E LI+ GYLKE    ++ K                      RP+  E  E E   + H HND L
Subjt:  ERLRSDPGGRNKNKYCMFHGDHDHTTRECIQLRDEIETLIQEGYLKEFVGQDRGK----------------------RPLPTE-QEREVAGIHHPHNDEL

Query:  VVALTVANVKVHRILIDGGSSVDVLSTVAFEAMKLGSDRLRPILTPLVEFGGEKVSPRGRFELPVTFGEGPQTVTRLVNFLVVD
        V+ L +ANVKVHRIL+DGGSS D++S  A++AM L    L+    PLV FGGE+V   GR ELPVTFG GP+ VT++V+FLVV+
Subjt:  VVALTVANVKVHRILIDGGSSVDVLSTVAFEAMKLGSDRLRPILTPLVEFGGEKVSPRGRFELPVTFGEGPQTVTRLVNFLVVD

XP_030923338.1 uncharacterized protein LOC115950248 [Quercus lobata]2.8e-3439.73Show/hide
Query:  ERLRSDPGGRNKNKYCMFHGDHDHTTRECIQLRDEIETLIQEGYLKEFVGQDR-----------GKRP------------------------LPTEQERE
        E+++ DP  RNKNKYC FH DH H T EC  L+ +IE LI++G LK FVG+DR             RP                        L   Q  +
Subjt:  ERLRSDPGGRNKNKYCMFHGDHDHTTRECIQLRDEIETLIQEGYLKEFVGQDR-----------GKRP------------------------LPTEQERE

Query:  VAG----------------------IHHPHNDELVVALTVANVKVHRILIDGGSSVDVLSTVAFEAMKLGSDRLRPILTPLVEFGGEKVSPRGRFELPVT
        ++G                      IHHPH+D +V+ L +A+    R+L+D GSS D+L   AF+ M+LG D+LRP+ +PL+ FGG KV P G   LPV 
Subjt:  VAG----------------------IHHPHNDELVVALTVANVKVHRILIDGGSSVDVLSTVAFEAMKLGSDRLRPILTPLVEFGGEKVSPRGRFELPVT

Query:  FGEGPQTVTRLVNFLVVDC
         G  PQ +TR VNFLVVDC
Subjt:  FGEGPQTVTRLVNFLVVDC

XP_030975818.1 uncharacterized protein LOC115995403 [Quercus lobata]2.8e-3439.73Show/hide
Query:  ERLRSDPGGRNKNKYCMFHGDHDHTTRECIQLRDEIETLIQEGYLKEFVGQDR-----------GKRP------------------------LPTEQERE
        E+++ DP  RNKNKYC FH DH H T EC  L+ +IE LI++G LK FVG+DR             RP                        L   Q  +
Subjt:  ERLRSDPGGRNKNKYCMFHGDHDHTTRECIQLRDEIETLIQEGYLKEFVGQDR-----------GKRP------------------------LPTEQERE

Query:  VAG----------------------IHHPHNDELVVALTVANVKVHRILIDGGSSVDVLSTVAFEAMKLGSDRLRPILTPLVEFGGEKVSPRGRFELPVT
        ++G                      IHHPH+D +V+ L +A+    R+L+D GSS D+L   AF+ M+LG D+LRP+ +PL+ FGG KV P G   LPV 
Subjt:  VAG----------------------IHHPHNDELVVALTVANVKVHRILIDGGSSVDVLSTVAFEAMKLGSDRLRPILTPLVEFGGEKVSPRGRFELPVT

Query:  FGEGPQTVTRLVNFLVVDC
         G  PQ +TR VNFLVVDC
Subjt:  FGEGPQTVTRLVNFLVVDC

TrEMBL top hitse value%identityAlignment
A0A6J1DAK4 uncharacterized protein LOC1110189024.5e-3847.78Show/hide
Query:  ERLRSDPGGRNKNKYCMFHGDHDHTTRECIQLRDEIETLIQEGYLKEFVGQDRG------------------KRPLPTE-QEREVAGIHHPHNDELVVAL
        ER+++ P  R K +YC FH DH H T++C  L++E+E LIQ GYLKE+V   +                   ++P   E  E EV  I HPHND LV+ L
Subjt:  ERLRSDPGGRNKNKYCMFHGDHDHTTRECIQLRDEIETLIQEGYLKEFVGQDRG------------------KRPLPTE-QEREVAGIHHPHNDELVVAL

Query:  TVANVKVHRILIDGGSSVDVLSTVAFEAMKLGSDRLRPILTPLVEFGGEKVSPRGRFELPVTFGEGPQTVTRLVNFLVVD
         +AN KVH IL+DGGSS D++S  A++ M LG   L+    PLV FGGE V P GR ELPVTFG GP+++T++V+FLVVD
Subjt:  TVANVKVHRILIDGGSSVDVLSTVAFEAMKLGSDRLRPILTPLVEFGGEKVSPRGRFELPVTFGEGPQTVTRLVNFLVVD

A0A6J1DP33 uncharacterized protein LOC1110228869.3e-3644.75Show/hide
Query:  ERLRSDPGGRNKNKYCMFHGDHDHTTRECIQLRDEIETLIQEGYLKEFV--------GQDRGKRPL----------PTE---QEREVAGIHHPHNDELVV
        ER+++ P  R+K +Y +FH DH H T++C  L++E+E LI+ GYLKE+V        G++    P+          P +    E E   + HPHND LV+
Subjt:  ERLRSDPGGRNKNKYCMFHGDHDHTTRECIQLRDEIETLIQEGYLKEFV--------GQDRGKRPL----------PTE---QEREVAGIHHPHNDELVV

Query:  ALTVANVKVHRILIDGGSSVDVLSTVAFEAMKLGSDRLRPILTPLVEFGGEKVSPRGRFELPVTFGEGPQTVTRLVNFLVV
         L +AN KVHRIL+DGGSS  ++S  A++AM LG   L+    PLV FGGE+V P GR ELPV FG GP+++ ++V+FLVV
Subjt:  ALTVANVKVHRILIDGGSSVDVLSTVAFEAMKLGSDRLRPILTPLVEFGGEKVSPRGRFELPVTFGEGPQTVTRLVNFLVV

A0A6J1DRG9 uncharacterized protein LOC1110235871.6e-3545.65Show/hide
Query:  ERLRSDPGGRNKNKYCMFHGDHDHTTRECIQLRDEIETLIQEGYLKEFVGQDRGK----------------------RPLPTE-QEREVAGIHHPHNDEL
        ER+++    R+K +YC+FH DHDH T++C  L++E+E LI+ GYLKE    ++ K                      RP+  E  E E   + H HND L
Subjt:  ERLRSDPGGRNKNKYCMFHGDHDHTTRECIQLRDEIETLIQEGYLKEFVGQDRGK----------------------RPLPTE-QEREVAGIHHPHNDEL

Query:  VVALTVANVKVHRILIDGGSSVDVLSTVAFEAMKLGSDRLRPILTPLVEFGGEKVSPRGRFELPVTFGEGPQTVTRLVNFLVVD
        V+ L +ANVKVHRIL+DGGSS D++S  A++AM L    L+    PLV FGGE+V   GR ELPVTFG GP+ VT++V+FLVV+
Subjt:  VVALTVANVKVHRILIDGGSSVDVLSTVAFEAMKLGSDRLRPILTPLVEFGGEKVSPRGRFELPVTFGEGPQTVTRLVNFLVVD

A0A6J1DV51 uncharacterized protein LOC1110246621.9e-3338.5Show/hide
Query:  LRSDPGGRNKNKYCMFHGDHDHTTRECIQLRDEIETLIQEGYLKEFV--------GQDRGKRPL---------PTEQ-----------------------
        +++ P  R+K +YC+FH DH H T++C  L++E+E LI+ GYLKE+V         ++  K P+         PTE+                       
Subjt:  LRSDPGGRNKNKYCMFHGDHDHTTRECIQLRDEIETLIQEGYLKEFV--------GQDRGKRPL---------PTEQ-----------------------

Query:  --------------EREVAGIHHPHNDELVVALTVANVKVHRILIDGGSSVDVLSTVAFEAMKLGSDRLRPILTPLVEFGGEKVSPRGRFELPVTFGEGP
                      E E   + HPHND LV+ L + N KVHRIL+DGGSS  ++S  A++AM LG   L+  L PLV FGGE+V  + R +LPVTFG GP
Subjt:  --------------EREVAGIHHPHNDELVVALTVANVKVHRILIDGGSSVDVLSTVAFEAMKLGSDRLRPILTPLVEFGGEKVSPRGRFELPVTFGEGP

Query:  QTVTRLVNFLVVD
        + +T++V FLVVD
Subjt:  QTVTRLVNFLVVD

A0A6J1DY17 uncharacterized protein LOC1110241273.9e-3442.63Show/hide
Query:  ERLRSDPGGRNKNKYCMFHGDHDHTTRECIQLRDEIETLIQEGYLKEFVGQDRG--------KRPL---------PTEQER------------EVAGIHH
        ER+++ PG R+K +YC+ H DH + T++C  L++E+E L++ GYLKE+V   +         K P          P E+E             +V  + H
Subjt:  ERLRSDPGGRNKNKYCMFHGDHDHTTRECIQLRDEIETLIQEGYLKEFVGQDRG--------KRPL---------PTEQER------------EVAGIHH

Query:  PHNDELVVALTVANVKVHRILIDGGSSVDVLSTVAFEAMKLGSDRLRPILTPLVEFGGEKVSPRGRFELPVTFGEGPQTVTRLVNFLVVD
        PHND LV+ L +A+ KVHRIL+DGGSS D++   A++AM LG   L+   T LV FGGE+V P GR +LPVTF  GP+++T++V FLVVD
Subjt:  PHNDELVVALTVANVKVHRILIDGGSSVDVLSTVAFEAMKLGSDRLRPILTPLVEFGGEKVSPRGRFELPVTFGEGPQTVTRLVNFLVVD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCACTTCTCGACCGATGGCCGAGGCCGAGGAGAGGCCAAGGAGCCGCAGGGCCGCGCAGAGCCAAAAGCCAAGTGTAACAGAAAGGCTGAGGTCAGACCCAGGAGG
GAGAAACAAGAACAAATACTGCATGTTCCATGGAGACCACGACCACACAACCCGGGAATGCATACAGCTAAGGGATGAAATAGAAACCCTAATTCAAGAGGGCTACCTCA
AGGAATTCGTAGGACAGGACAGAGGAAAGAGACCTTTGCCAACAGAACAGGAGAGAGAGGTTGCAGGGATACACCATCCACACAATGACGAGCTGGTAGTAGCCCTAACA
GTCGCCAATGTCAAAGTACATCGAATCTTAATTGATGGGGGAAGCTCGGTTGATGTCCTCTCAACTGTCGCGTTCGAGGCCATGAAGCTGGGAAGTGATCGTCTAAGGCC
GATCCTTACACCATTGGTGGAGTTTGGCGGGGAAAAGGTGAGCCCAAGGGGACGCTTCGAACTGCCAGTAACGTTTGGGGAAGGACCCCAAACAGTTACAAGATTGGTCA
ACTTCCTAGTGGTGGATTGCGTCCTAGCTGGTAAGGTTCAAACCTTTAAGGCTCGACTTGTGGCAAAGGGTTTTACCCAGAGGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCACTTCTCGACCGATGGCCGAGGCCGAGGAGAGGCCAAGGAGCCGCAGGGCCGCGCAGAGCCAAAAGCCAAGTGTAACAGAAAGGCTGAGGTCAGACCCAGGAGG
GAGAAACAAGAACAAATACTGCATGTTCCATGGAGACCACGACCACACAACCCGGGAATGCATACAGCTAAGGGATGAAATAGAAACCCTAATTCAAGAGGGCTACCTCA
AGGAATTCGTAGGACAGGACAGAGGAAAGAGACCTTTGCCAACAGAACAGGAGAGAGAGGTTGCAGGGATACACCATCCACACAATGACGAGCTGGTAGTAGCCCTAACA
GTCGCCAATGTCAAAGTACATCGAATCTTAATTGATGGGGGAAGCTCGGTTGATGTCCTCTCAACTGTCGCGTTCGAGGCCATGAAGCTGGGAAGTGATCGTCTAAGGCC
GATCCTTACACCATTGGTGGAGTTTGGCGGGGAAAAGGTGAGCCCAAGGGGACGCTTCGAACTGCCAGTAACGTTTGGGGAAGGACCCCAAACAGTTACAAGATTGGTCA
ACTTCCTAGTGGTGGATTGCGTCCTAGCTGGTAAGGTTCAAACCTTTAAGGCTCGACTTGTGGCAAAGGGTTTTACCCAGAGGGAATGA
Protein sequenceShow/hide protein sequence
MSTSRPMAEAEERPRSRRAAQSQKPSVTERLRSDPGGRNKNKYCMFHGDHDHTTRECIQLRDEIETLIQEGYLKEFVGQDRGKRPLPTEQEREVAGIHHPHNDELVVALT
VANVKVHRILIDGGSSVDVLSTVAFEAMKLGSDRLRPILTPLVEFGGEKVSPRGRFELPVTFGEGPQTVTRLVNFLVVDCVLAGKVQTFKARLVAKGFTQRE