; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0032153 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032153
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotran_gag_3 domain-containing protein
Genome locationchr11:26253480..26254346
RNA-Seq ExpressionLag0032153
SyntenyLag0032153
Gene Ontology termsGO:0000166 - nucleotide binding (molecular function)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8516701.1 hypothetical protein F0562_016793 [Nyssa sinensis]3.7e-2835.34Show/hide
Query:  MLKAHSLFGIVDSSVPCPLEFLLDAVGNQTTEVIPAHTQWIAQDSALITLINATLSKTAYSYVIGCKSSKEVWISLKKYFSSLTRSHVHELKSSLRTVSK
        +LKAHSL G +D + PCP +F+ D  G  T ++ P +  W  QD AL+TL+NATLS+TA S+VIG  +S+E W++L++ FS+ TRS++ +LKS+L  +SK
Subjt:  MLKAHSLFGIVDSSVPCPLEFLLDAVGNQTTEVIPAHTQWIAQDSALITLINATLSKTAYSYVIGCKSSKEVWISLKKYFSSLTRSHVHELKSSLRTVSK

Query:  SAMESIDEYLLRVKELVDKLATIFVKIDDEDLLLY-----------------------TLKELHALLKSEAKILEQQTESTSITPLNSTVMLSSSPSQFS
           +SID Y+ ++K+  D LA++ V I+DED+L+Y                       TL+E++A+LK E + +E   +  +  P    +M ++    FS
Subjt:  SAMESIDEYLLRVKELVDKLATIFVKIDDEDLLLY-----------------------TLKELHALLKSEAKILEQQTESTSITPLNSTVMLSSSPSQFS

Query:  PNRGRGRGRNPNPNYGSGRGGGQSNQGYYGNSNHGRGGGSNSPNQNSSFNQGQLAPNQGRGDGFGSIQTSCRGVICQICSNRG
         NRG       +P+  SGRG G+      G   H   G   SPN    F Q  L     +         +   V+CQIC+  G
Subjt:  PNRGRGRGRNPNPNYGSGRGGGQSNQGYYGNSNHGRGGGSNSPNQNSSFNQGQLAPNQGRGDGFGSIQTSCRGVICQICSNRG

KAA8519786.1 hypothetical protein F0562_014124 [Nyssa sinensis]3.7e-2835.34Show/hide
Query:  MLKAHSLFGIVDSSVPCPLEFLLDAVGNQTTEVIPAHTQWIAQDSALITLINATLSKTAYSYVIGCKSSKEVWISLKKYFSSLTRSHVHELKSSLRTVSK
        +LKAHSL G +D + PCP +F+ D  G  T ++ P +  W  QD AL+TL+NATLS+TA S+VIG  +S+E W++L++ FS+ TRS++ +LKS+L  +SK
Subjt:  MLKAHSLFGIVDSSVPCPLEFLLDAVGNQTTEVIPAHTQWIAQDSALITLINATLSKTAYSYVIGCKSSKEVWISLKKYFSSLTRSHVHELKSSLRTVSK

Query:  SAMESIDEYLLRVKELVDKLATIFVKIDDEDLLLY-----------------------TLKELHALLKSEAKILEQQTESTSITPLNSTVMLSSSPSQFS
           +SID Y+ ++K+  D LA++ V I+DED+L+Y                       TL+E++A+LK E + +E   +  +  P    +M ++    FS
Subjt:  SAMESIDEYLLRVKELVDKLATIFVKIDDEDLLLY-----------------------TLKELHALLKSEAKILEQQTESTSITPLNSTVMLSSSPSQFS

Query:  PNRGRGRGRNPNPNYGSGRGGGQSNQGYYGNSNHGRGGGSNSPNQNSSFNQGQLAPNQGRGDGFGSIQTSCRGVICQICSNRG
         NRG       +P+  SGRG G+      G   H   G   SPN    F Q  L     +         +   V+CQIC+  G
Subjt:  PNRGRGRGRNPNPNYGSGRGGGQSNQGYYGNSNHGRGGGSNSPNQNSSFNQGQLAPNQGRGDGFGSIQTSCRGVICQICSNRG

KAA8524269.1 hypothetical protein F0562_010692 [Nyssa sinensis]3.7e-2835.34Show/hide
Query:  MLKAHSLFGIVDSSVPCPLEFLLDAVGNQTTEVIPAHTQWIAQDSALITLINATLSKTAYSYVIGCKSSKEVWISLKKYFSSLTRSHVHELKSSLRTVSK
        +LKAHSL G +D + PCP +F+ D  G  T ++ P +  W  QD AL+TL+NATLS+TA S+VIG  +S+E W++L++ FS+ TRS++ +LKS+L  +SK
Subjt:  MLKAHSLFGIVDSSVPCPLEFLLDAVGNQTTEVIPAHTQWIAQDSALITLINATLSKTAYSYVIGCKSSKEVWISLKKYFSSLTRSHVHELKSSLRTVSK

Query:  SAMESIDEYLLRVKELVDKLATIFVKIDDEDLLLY-----------------------TLKELHALLKSEAKILEQQTESTSITPLNSTVMLSSSPSQFS
           +SID Y+ ++K+  D LA++ V I+DED+L+Y                       TL+E++A+LK E + +E   +  +  P    +M ++    FS
Subjt:  SAMESIDEYLLRVKELVDKLATIFVKIDDEDLLLY-----------------------TLKELHALLKSEAKILEQQTESTSITPLNSTVMLSSSPSQFS

Query:  PNRGRGRGRNPNPNYGSGRGGGQSNQGYYGNSNHGRGGGSNSPNQNSSFNQGQLAPNQGRGDGFGSIQTSCRGVICQICSNRG
         NRG       +P+  SGRG G+      G   H   G   SPN    F Q  L     +         +   V+CQIC+  G
Subjt:  PNRGRGRGRNPNPNYGSGRGGGQSNQGYYGNSNHGRGGGSNSPNQNSSFNQGQLAPNQGRGDGFGSIQTSCRGVICQICSNRG

KAA8537769.1 hypothetical protein F0562_027652 [Nyssa sinensis]1.7e-2835.05Show/hide
Query:  MLKAHSLFGIVDSSVPCPLEFLLDAVGNQTTEVIPAHTQWIAQDSALITLINATLSKTAYSYVIGCKSSKEVWISLKKYFSSLTRSHVHELKSSLRTVSK
        +LKAHSL G +D + PCP +F+ D  G  T ++ P +  W  QD AL+TL+NATLS+TA S+VIG  +S+E W++L++ FS+ TRS++ +LKS+L  +SK
Subjt:  MLKAHSLFGIVDSSVPCPLEFLLDAVGNQTTEVIPAHTQWIAQDSALITLINATLSKTAYSYVIGCKSSKEVWISLKKYFSSLTRSHVHELKSSLRTVSK

Query:  SAMESIDEYLLRVKELVDKLATIFVKIDDEDLLLY-----------------------TLKELHALLKSEAKILEQQTESTSITPLNSTVMLSSSPSQFS
           +SID Y+ ++K+  D LA++ V I+DED+L+Y                       TL+E++A+LK E + +E   +  +  P    +M ++    FS
Subjt:  SAMESIDEYLLRVKELVDKLATIFVKIDDEDLLLY-----------------------TLKELHALLKSEAKILEQQTESTSITPLNSTVMLSSSPSQFS

Query:  PNR--------GRGRGRNPNPNYGSGRGGGQSNQGYYGNSNHGRGGGSNSPNQNSSFNQGQLAPNQGRGDGFGSIQTSCRGVICQICSNRG
         NR        GRGRGR    N    RGG   + G + + N G+   SN P       Q     N                V+CQIC+  G
Subjt:  PNR--------GRGRGRNPNPNYGSGRGGGQSNQGYYGNSNHGRGGGSNSPNQNSSFNQGQLAPNQGRGDGFGSIQTSCRGVICQICSNRG

XP_022159298.1 uncharacterized protein LOC111025709 [Momordica charantia]2.0e-2938.96Show/hide
Query:  MLKAHSLFGIVDSSVPCPLEFLL---DAVGNQTTEVIPAHTQWIAQDSALITLINATLSKTAYSYVIGCKSSKEVWISLKKYFSSLTRSHVHELKSSLRT
        +LKAH L+G +D S P P +FL+   D++ + +  V PA + WIA+D AL+TL+NATLS +A +Y++GC SS++VW +L KY+SS +R++V  LKS+L++
Subjt:  MLKAHSLFGIVDSSVPCPLEFLL---DAVGNQTTEVIPAHTQWIAQDSALITLINATLSKTAYSYVIGCKSSKEVWISLKKYFSSLTRSHVHELKSSLRT

Query:  VSKSAMESIDEYLLRVKELVDKLATIFVKIDDEDLLLYTL-----------------------KELHALLKSEAKILEQQTESTSITPLNSTVM--LSSS
        +SK   ESID Y+ R+KEL DKLA + V +D+EDLL+YTL                       +EL+ LL  E   +++QT+   +   +ST++  +++ 
Subjt:  VSKSAMESIDEYLLRVKELVDKLATIFVKIDDEDLLLYTL-----------------------KELHALLKSEAKILEQQTESTSITPLNSTVM--LSSS

Query:  PSQFSPN-------RGRGRGRNPNPNYGS-----GRGGGQSNQGYYGNS
            +PN        G G+G+ PNPN  S     G  GG+S +G+ G +
Subjt:  PSQFSPN-------RGRGRGRNPNPNYGS-----GRGGGQSNQGYYGNS

TrEMBL top hitse value%identityAlignment
A0A5B7BD59 Retrotran_gag_3 domain-containing protein1.4e-2835.71Show/hide
Query:  MLKAHSLFGIVDSSVPCPLEFLLDAVGNQTTEVIPAHTQWIAQDSALITLINATLSKTAYSYVIGCKSSKEVWISLKKYFSSLTRSHVHELKSSLRTVSK
        +L+AH+L G VD +  CP +FL D  G  TTE  P++  WI QD AL+ +INATL+ TA S VIG K+S++VW++L+++FSS +RS++ +LK++L++++K
Subjt:  MLKAHSLFGIVDSSVPCPLEFLLDAVGNQTTEVIPAHTQWIAQDSALITLINATLSKTAYSYVIGCKSSKEVWISLKKYFSSLTRSHVHELKSSLRTVSK

Query:  SAMESIDEYLLRVKELVDKLATIFVKIDDEDLLLY-----------------------TLKELHALLKSEAKILEQQTESTSITPLNSTVMLSSSPSQFS
           ++ID+Y+ +VK   D LA + V IDDEDLL+Y                       TL+E+H LL++E + +E   +        S ++ SS  + F 
Subjt:  SAMESIDEYLLRVKELVDKLATIFVKIDDEDLLLY-----------------------TLKELHALLKSEAKILEQQTESTSITPLNSTVMLSSSPSQFS

Query:  PNRGRGRGRNPNPNYGSGRGGGQSNQGYYGNSNHGRGGGSNSPNQNSSFNQGQLAPNQGRGDGFGSIQTSCRGVICQICS
         NRG  RGR        GRG      G + NS        NSPN + ++ +GQ    Q               + CQIC+
Subjt:  PNRGRGRGRNPNPNYGSGRGGGQSNQGYYGNSNHGRGGGSNSPNQNSSFNQGQLAPNQGRGDGFGSIQTSCRGVICQICS

A0A5J4ZT09 Flavin-containing monooxygenase1.8e-2835.34Show/hide
Query:  MLKAHSLFGIVDSSVPCPLEFLLDAVGNQTTEVIPAHTQWIAQDSALITLINATLSKTAYSYVIGCKSSKEVWISLKKYFSSLTRSHVHELKSSLRTVSK
        +LKAHSL G +D + PCP +F+ D  G  T ++ P +  W  QD AL+TL+NATLS+TA S+VIG  +S+E W++L++ FS+ TRS++ +LKS+L  +SK
Subjt:  MLKAHSLFGIVDSSVPCPLEFLLDAVGNQTTEVIPAHTQWIAQDSALITLINATLSKTAYSYVIGCKSSKEVWISLKKYFSSLTRSHVHELKSSLRTVSK

Query:  SAMESIDEYLLRVKELVDKLATIFVKIDDEDLLLY-----------------------TLKELHALLKSEAKILEQQTESTSITPLNSTVMLSSSPSQFS
           +SID Y+ ++K+  D LA++ V I+DED+L+Y                       TL+E++A+LK E + +E   +  +  P    +M ++    FS
Subjt:  SAMESIDEYLLRVKELVDKLATIFVKIDDEDLLLY-----------------------TLKELHALLKSEAKILEQQTESTSITPLNSTVMLSSSPSQFS

Query:  PNRGRGRGRNPNPNYGSGRGGGQSNQGYYGNSNHGRGGGSNSPNQNSSFNQGQLAPNQGRGDGFGSIQTSCRGVICQICSNRG
         NRG       +P+  SGRG G+      G   H   G   SPN    F Q  L     +         +   V+CQIC+  G
Subjt:  PNRGRGRGRNPNPNYGSGRGGGQSNQGYYGNSNHGRGGGSNSPNQNSSFNQGQLAPNQGRGDGFGSIQTSCRGVICQICSNRG

A0A5J5A0G3 Retrotran_gag_3 domain-containing protein1.8e-2835.34Show/hide
Query:  MLKAHSLFGIVDSSVPCPLEFLLDAVGNQTTEVIPAHTQWIAQDSALITLINATLSKTAYSYVIGCKSSKEVWISLKKYFSSLTRSHVHELKSSLRTVSK
        +LKAHSL G +D + PCP +F+ D  G  T ++ P +  W  QD AL+TL+NATLS+TA S+VIG  +S+E W++L++ FS+ TRS++ +LKS+L  +SK
Subjt:  MLKAHSLFGIVDSSVPCPLEFLLDAVGNQTTEVIPAHTQWIAQDSALITLINATLSKTAYSYVIGCKSSKEVWISLKKYFSSLTRSHVHELKSSLRTVSK

Query:  SAMESIDEYLLRVKELVDKLATIFVKIDDEDLLLY-----------------------TLKELHALLKSEAKILEQQTESTSITPLNSTVMLSSSPSQFS
           +SID Y+ ++K+  D LA++ V I+DED+L+Y                       TL+E++A+LK E + +E   +  +  P    +M ++    FS
Subjt:  SAMESIDEYLLRVKELVDKLATIFVKIDDEDLLLY-----------------------TLKELHALLKSEAKILEQQTESTSITPLNSTVMLSSSPSQFS

Query:  PNRGRGRGRNPNPNYGSGRGGGQSNQGYYGNSNHGRGGGSNSPNQNSSFNQGQLAPNQGRGDGFGSIQTSCRGVICQICSNRG
         NRG       +P+  SGRG G+      G   H   G   SPN    F Q  L     +         +   V+CQIC+  G
Subjt:  PNRGRGRGRNPNPNYGSGRGGGQSNQGYYGNSNHGRGGGSNSPNQNSSFNQGQLAPNQGRGDGFGSIQTSCRGVICQICSNRG

A0A5J5B4Y2 Retrotran_gag_3 domain-containing protein8.1e-2935.05Show/hide
Query:  MLKAHSLFGIVDSSVPCPLEFLLDAVGNQTTEVIPAHTQWIAQDSALITLINATLSKTAYSYVIGCKSSKEVWISLKKYFSSLTRSHVHELKSSLRTVSK
        +LKAHSL G +D + PCP +F+ D  G  T ++ P +  W  QD AL+TL+NATLS+TA S+VIG  +S+E W++L++ FS+ TRS++ +LKS+L  +SK
Subjt:  MLKAHSLFGIVDSSVPCPLEFLLDAVGNQTTEVIPAHTQWIAQDSALITLINATLSKTAYSYVIGCKSSKEVWISLKKYFSSLTRSHVHELKSSLRTVSK

Query:  SAMESIDEYLLRVKELVDKLATIFVKIDDEDLLLY-----------------------TLKELHALLKSEAKILEQQTESTSITPLNSTVMLSSSPSQFS
           +SID Y+ ++K+  D LA++ V I+DED+L+Y                       TL+E++A+LK E + +E   +  +  P    +M ++    FS
Subjt:  SAMESIDEYLLRVKELVDKLATIFVKIDDEDLLLY-----------------------TLKELHALLKSEAKILEQQTESTSITPLNSTVMLSSSPSQFS

Query:  PNR--------GRGRGRNPNPNYGSGRGGGQSNQGYYGNSNHGRGGGSNSPNQNSSFNQGQLAPNQGRGDGFGSIQTSCRGVICQICSNRG
         NR        GRGRGR    N    RGG   + G + + N G+   SN P       Q     N                V+CQIC+  G
Subjt:  PNR--------GRGRGRNPNPNYGSGRGGGQSNQGYYGNSNHGRGGGSNSPNQNSSFNQGQLAPNQGRGDGFGSIQTSCRGVICQICSNRG

A0A6J1DYF1 uncharacterized protein LOC1110257099.5e-3038.96Show/hide
Query:  MLKAHSLFGIVDSSVPCPLEFLL---DAVGNQTTEVIPAHTQWIAQDSALITLINATLSKTAYSYVIGCKSSKEVWISLKKYFSSLTRSHVHELKSSLRT
        +LKAH L+G +D S P P +FL+   D++ + +  V PA + WIA+D AL+TL+NATLS +A +Y++GC SS++VW +L KY+SS +R++V  LKS+L++
Subjt:  MLKAHSLFGIVDSSVPCPLEFLL---DAVGNQTTEVIPAHTQWIAQDSALITLINATLSKTAYSYVIGCKSSKEVWISLKKYFSSLTRSHVHELKSSLRT

Query:  VSKSAMESIDEYLLRVKELVDKLATIFVKIDDEDLLLYTL-----------------------KELHALLKSEAKILEQQTESTSITPLNSTVM--LSSS
        +SK   ESID Y+ R+KEL DKLA + V +D+EDLL+YTL                       +EL+ LL  E   +++QT+   +   +ST++  +++ 
Subjt:  VSKSAMESIDEYLLRVKELVDKLATIFVKIDDEDLLLYTL-----------------------KELHALLKSEAKILEQQTESTSITPLNSTVM--LSSS

Query:  PSQFSPN-------RGRGRGRNPNPNYGS-----GRGGGQSNQGYYGNS
            +PN        G G+G+ PNPN  S     G  GG+S +G+ G +
Subjt:  PSQFSPN-------RGRGRGRNPNPNYGS-----GRGGGQSNQGYYGNS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCAAAGCTCACTCACTGTTTGGAATTGTTGATAGTTCAGTACCATGTCCTCTAGAATTCTTGCTCGATGCCGTTGGAAATCAAACTACTGAAGTCATTCCTGCCCA
CACTCAGTGGATTGCTCAAGATAGCGCTCTAATCACGTTGATTAACGCTACTTTGTCAAAGACCGCTTATTCGTATGTCATTGGGTGTAAATCCTCCAAAGAGGTATGGA
TCTCTCTTAAGAAATACTTTTCTTCATTAACAAGGTCTCATGTTCATGAACTCAAGTCCTCGCTTCGTACTGTTTCGAAATCTGCTATGGAATCGATTGATGAATATCTT
CTGCGTGTAAAAGAGTTGGTAGATAAGTTAGCCACTATCTTCGTCAAAATTGATGATGAAGATTTACTCCTATACACCTTAAAAGAACTTCATGCCTTGTTGAAGTCGGA
AGCCAAGATCCTTGAGCAGCAAACTGAGTCCACCTCGATCACTCCTCTCAATTCGACTGTGATGCTTTCATCTTCTCCAAGTCAGTTTAGTCCAAATCGAGGACGAGGAA
GAGGAAGAAATCCTAATCCAAATTATGGATCAGGTCGTGGAGGTGGTCAATCAAATCAAGGATACTATGGCAATTCCAATCATGGCCGTGGCGGTGGTTCTAACTCTCCT
AATCAGAATTCTTCTTTCAATCAGGGACAACTTGCTCCCAATCAAGGTCGTGGCGATGGTTTTGGATCTATTCAGACCTCTTGTCGTGGTGTTATATGTCAGATTTGTAG
CAATCGAGGGCTTGCTACAATCGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCAAAGCTCACTCACTGTTTGGAATTGTTGATAGTTCAGTACCATGTCCTCTAGAATTCTTGCTCGATGCCGTTGGAAATCAAACTACTGAAGTCATTCCTGCCCA
CACTCAGTGGATTGCTCAAGATAGCGCTCTAATCACGTTGATTAACGCTACTTTGTCAAAGACCGCTTATTCGTATGTCATTGGGTGTAAATCCTCCAAAGAGGTATGGA
TCTCTCTTAAGAAATACTTTTCTTCATTAACAAGGTCTCATGTTCATGAACTCAAGTCCTCGCTTCGTACTGTTTCGAAATCTGCTATGGAATCGATTGATGAATATCTT
CTGCGTGTAAAAGAGTTGGTAGATAAGTTAGCCACTATCTTCGTCAAAATTGATGATGAAGATTTACTCCTATACACCTTAAAAGAACTTCATGCCTTGTTGAAGTCGGA
AGCCAAGATCCTTGAGCAGCAAACTGAGTCCACCTCGATCACTCCTCTCAATTCGACTGTGATGCTTTCATCTTCTCCAAGTCAGTTTAGTCCAAATCGAGGACGAGGAA
GAGGAAGAAATCCTAATCCAAATTATGGATCAGGTCGTGGAGGTGGTCAATCAAATCAAGGATACTATGGCAATTCCAATCATGGCCGTGGCGGTGGTTCTAACTCTCCT
AATCAGAATTCTTCTTTCAATCAGGGACAACTTGCTCCCAATCAAGGTCGTGGCGATGGTTTTGGATCTATTCAGACCTCTTGTCGTGGTGTTATATGTCAGATTTGTAG
CAATCGAGGGCTTGCTACAATCGCTTGA
Protein sequenceShow/hide protein sequence
MLKAHSLFGIVDSSVPCPLEFLLDAVGNQTTEVIPAHTQWIAQDSALITLINATLSKTAYSYVIGCKSSKEVWISLKKYFSSLTRSHVHELKSSLRTVSKSAMESIDEYL
LRVKELVDKLATIFVKIDDEDLLLYTLKELHALLKSEAKILEQQTESTSITPLNSTVMLSSSPSQFSPNRGRGRGRNPNPNYGSGRGGGQSNQGYYGNSNHGRGGGSNSP
NQNSSFNQGQLAPNQGRGDGFGSIQTSCRGVICQICSNRGLATIA