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Lag0032171 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032171
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTryptophanyl-tRNA synthetase
Genome locationchr11:26548141..26550091
RNA-Seq ExpressionLag0032171
SyntenyLag0032171
Gene Ontology termsGO:0006436 - tryptophanyl-tRNA aminoacylation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0004830 - tryptophan-tRNA ligase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR014729 - Rossmann-like alpha/beta/alpha sandwich fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KDO79879.1 hypothetical protein CISIN_1g015582mg [Citrus sinensis]1.3e-3093.15Show/hide
Query:  RLARENAKDIIACGFDISKTFIFSDFDYVGGAFYKNMDKVAKCVTYNKVVGIFGFTREDHIGKVSFPPVQIMI
        RLARENAKDIIACGFD++KTFIFSDFDYVGGAFYKNM KVAKCVTYNKVVGIFGFT EDHIGKVSFPPVQ MI
Subjt:  RLARENAKDIIACGFDISKTFIFSDFDYVGGAFYKNMDKVAKCVTYNKVVGIFGFTREDHIGKVSFPPVQIMI

PPD91328.1 hypothetical protein GOBAR_DD11728 [Gossypium barbadense]1.7e-3097.14Show/hide
Query:  RLARENAKDIIACGFDISKTFIFSDFDYVGGAFYKNMDKVAKCVTYNKVVGIFGFTREDHIGKVSFPPVQ
        RLARENAKDIIACGFDISKTFIFSDFDYVGGAFYKNM KVAKCVTYNKVVGIFGFT EDHIGKVSFPPVQ
Subjt:  RLARENAKDIIACGFDISKTFIFSDFDYVGGAFYKNMDKVAKCVTYNKVVGIFGFTREDHIGKVSFPPVQ

XP_008452422.1 PREDICTED: tryptophan--tRNA ligase, cytoplasmic [Cucumis melo]1.7e-3097.14Show/hide
Query:  RLARENAKDIIACGFDISKTFIFSDFDYVGGAFYKNMDKVAKCVTYNKVVGIFGFTREDHIGKVSFPPVQ
        RLARENAKDIIACGFDISKTFIFSDFDYVGGAFYKNM KVAKCVTYNKVVGIFGFT EDHIGKVSFPPVQ
Subjt:  RLARENAKDIIACGFDISKTFIFSDFDYVGGAFYKNMDKVAKCVTYNKVVGIFGFTREDHIGKVSFPPVQ

XP_023537341.1 tryptophan--tRNA ligase, cytoplasmic-like [Cucurbita pepo subsp. pepo]1.7e-3097.14Show/hide
Query:  RLARENAKDIIACGFDISKTFIFSDFDYVGGAFYKNMDKVAKCVTYNKVVGIFGFTREDHIGKVSFPPVQ
        RLARENAKDIIACGFDISKTFIFSDFDYVGGAFYKNM KVAKCVTYNKVVGIFGFT EDHIGKVSFPPVQ
Subjt:  RLARENAKDIIACGFDISKTFIFSDFDYVGGAFYKNMDKVAKCVTYNKVVGIFGFTREDHIGKVSFPPVQ

XP_033509906.1 tryptophan--tRNA ligase, cytoplasmic-like isoform X2 [Nicotiana tomentosiformis]9.9e-3194.37Show/hide
Query:  RLARENAKDIIACGFDISKTFIFSDFDYVGGAFYKNMDKVAKCVTYNKVVGIFGFTREDHIGKVSFPPVQI
        RLARENAKDIIACGFD+SKTFIFSDFDYVGGAFYKNM KVAKCVTYNKVVGIFGFT EDHIGKVSFPPVQ+
Subjt:  RLARENAKDIIACGFDISKTFIFSDFDYVGGAFYKNMDKVAKCVTYNKVVGIFGFTREDHIGKVSFPPVQI

TrEMBL top hitse value%identityAlignment
A0A067GJS0 Tryptophanyl-tRNA synthetase6.3e-3193.15Show/hide
Query:  RLARENAKDIIACGFDISKTFIFSDFDYVGGAFYKNMDKVAKCVTYNKVVGIFGFTREDHIGKVSFPPVQIMI
        RLARENAKDIIACGFD++KTFIFSDFDYVGGAFYKNM KVAKCVTYNKVVGIFGFT EDHIGKVSFPPVQ MI
Subjt:  RLARENAKDIIACGFDISKTFIFSDFDYVGGAFYKNMDKVAKCVTYNKVVGIFGFTREDHIGKVSFPPVQIMI

A0A0B0NGP7 Tryptophanyl-tRNA synthetase8.2e-3197.14Show/hide
Query:  RLARENAKDIIACGFDISKTFIFSDFDYVGGAFYKNMDKVAKCVTYNKVVGIFGFTREDHIGKVSFPPVQ
        RLARENAKDIIACGFDISKTFIFSDFDYVGGAFYKNM KVAKCVTYNKVVGIFGFT EDHIGKVSFPPVQ
Subjt:  RLARENAKDIIACGFDISKTFIFSDFDYVGGAFYKNMDKVAKCVTYNKVVGIFGFTREDHIGKVSFPPVQ

A0A0D2SW54 Tryptophanyl-tRNA synthetase8.2e-3197.14Show/hide
Query:  RLARENAKDIIACGFDISKTFIFSDFDYVGGAFYKNMDKVAKCVTYNKVVGIFGFTREDHIGKVSFPPVQ
        RLARENAKDIIACGFDISKTFIFSDFDYVGGAFYKNM KVAKCVTYNKVVGIFGFT EDHIGKVSFPPVQ
Subjt:  RLARENAKDIIACGFDISKTFIFSDFDYVGGAFYKNMDKVAKCVTYNKVVGIFGFTREDHIGKVSFPPVQ

A0A2P5VSV0 Tryptophanyl-tRNA synthetase8.2e-3197.14Show/hide
Query:  RLARENAKDIIACGFDISKTFIFSDFDYVGGAFYKNMDKVAKCVTYNKVVGIFGFTREDHIGKVSFPPVQ
        RLARENAKDIIACGFDISKTFIFSDFDYVGGAFYKNM KVAKCVTYNKVVGIFGFT EDHIGKVSFPPVQ
Subjt:  RLARENAKDIIACGFDISKTFIFSDFDYVGGAFYKNMDKVAKCVTYNKVVGIFGFTREDHIGKVSFPPVQ

A0A6A3ARD2 Tryptophanyl-tRNA synthetase8.2e-3197.14Show/hide
Query:  RLARENAKDIIACGFDISKTFIFSDFDYVGGAFYKNMDKVAKCVTYNKVVGIFGFTREDHIGKVSFPPVQ
        RLARENAKDIIACGFDISKTFIFSDFDYVGGAFYKNM KVAKCVTYNKVVGIFGFT EDHIGKVSFPPVQ
Subjt:  RLARENAKDIIACGFDISKTFIFSDFDYVGGAFYKNMDKVAKCVTYNKVVGIFGFTREDHIGKVSFPPVQ

SwissProt top hitse value%identityAlignment
P17248 Tryptophan--tRNA ligase, cytoplasmic6.3e-2068.57Show/hide
Query:  ARENAKDIIACGFDISKTFIFSDFDYVG--GAFYKNMDKVAKCVTYNKVVGIFGFTREDHIGKVSFPPVQ
        A ENAKDIIACGFDI+KTFIFSD DY+G    FYKN+ K+ K VT+N+V GIFGFT  D IGK+SFP +Q
Subjt:  ARENAKDIIACGFDISKTFIFSDFDYVG--GAFYKNMDKVAKCVTYNKVVGIFGFTREDHIGKVSFPPVQ

P23381 Tryptophan--tRNA ligase, cytoplasmic3.7e-2068.57Show/hide
Query:  ARENAKDIIACGFDISKTFIFSDFDYVG--GAFYKNMDKVAKCVTYNKVVGIFGFTREDHIGKVSFPPVQ
        A ENAKDIIACGFDI+KTFIFSD DY+G    FYKN+ K+ K VT+N+V GIFGFT  D IGK+SFP +Q
Subjt:  ARENAKDIIACGFDISKTFIFSDFDYVG--GAFYKNMDKVAKCVTYNKVVGIFGFTREDHIGKVSFPPVQ

P23612 Tryptophan--tRNA ligase, cytoplasmic1.1e-1967.65Show/hide
Query:  ENAKDIIACGFDISKTFIFSDFDYVG--GAFYKNMDKVAKCVTYNKVVGIFGFTREDHIGKVSFPPVQ
        ENAKDIIACGFD++KTFIFSD DY+G    FYKN+ K+ K VT+N+V GIFGFT  D IGK+SFP +Q
Subjt:  ENAKDIIACGFDISKTFIFSDFDYVG--GAFYKNMDKVAKCVTYNKVVGIFGFTREDHIGKVSFPPVQ

Q5R4J1 Tryptophan--tRNA ligase, cytoplasmic3.7e-2068.57Show/hide
Query:  ARENAKDIIACGFDISKTFIFSDFDYVG--GAFYKNMDKVAKCVTYNKVVGIFGFTREDHIGKVSFPPVQ
        A ENAKDIIACGFDI+KTFIFSD DY+G    FYKN+ K+ K VT+N+V GIFGFT  D IGK+SFP +Q
Subjt:  ARENAKDIIACGFDISKTFIFSDFDYVG--GAFYKNMDKVAKCVTYNKVVGIFGFTREDHIGKVSFPPVQ

Q9SR15 Tryptophan--tRNA ligase, cytoplasmic9.6e-2971.95Show/hide
Query:  AIFSQANQNTAPRLARENAKDIIACGFDISKTFIFSDFDYVGGAFYKNMDKVAKCVTYNKVVGIFGFTREDHIGKVSFPPVQ
        +I+   +   + RLARENAKDIIACGFD++KTFIFSDFDYVGGAFYKNM KV KCVT NK +GIFGF+ ED I K+SFPPVQ
Subjt:  AIFSQANQNTAPRLARENAKDIIACGFDISKTFIFSDFDYVGGAFYKNMDKVAKCVTYNKVVGIFGFTREDHIGKVSFPPVQ

Arabidopsis top hitse value%identityAlignment
AT3G04600.1 Nucleotidylyl transferase superfamily protein6.8e-3071.95Show/hide
Query:  AIFSQANQNTAPRLARENAKDIIACGFDISKTFIFSDFDYVGGAFYKNMDKVAKCVTYNKVVGIFGFTREDHIGKVSFPPVQ
        +I+   +   + RLARENAKDIIACGFD++KTFIFSDFDYVGGAFYKNM KV KCVT NK +GIFGF+ ED I K+SFPPVQ
Subjt:  AIFSQANQNTAPRLARENAKDIIACGFDISKTFIFSDFDYVGGAFYKNMDKVAKCVTYNKVVGIFGFTREDHIGKVSFPPVQ

AT3G04600.2 Nucleotidylyl transferase superfamily protein6.8e-3071.95Show/hide
Query:  AIFSQANQNTAPRLARENAKDIIACGFDISKTFIFSDFDYVGGAFYKNMDKVAKCVTYNKVVGIFGFTREDHIGKVSFPPVQ
        +I+   +   + RLARENAKDIIACGFD++KTFIFSDFDYVGGAFYKNM KV KCVT NK +GIFGF+ ED I K+SFPPVQ
Subjt:  AIFSQANQNTAPRLARENAKDIIACGFDISKTFIFSDFDYVGGAFYKNMDKVAKCVTYNKVVGIFGFTREDHIGKVSFPPVQ

AT3G04600.3 Nucleotidylyl transferase superfamily protein6.8e-3071.95Show/hide
Query:  AIFSQANQNTAPRLARENAKDIIACGFDISKTFIFSDFDYVGGAFYKNMDKVAKCVTYNKVVGIFGFTREDHIGKVSFPPVQ
        +I+   +   + RLARENAKDIIACGFD++KTFIFSDFDYVGGAFYKNM KV KCVT NK +GIFGF+ ED I K+SFPPVQ
Subjt:  AIFSQANQNTAPRLARENAKDIIACGFDISKTFIFSDFDYVGGAFYKNMDKVAKCVTYNKVVGIFGFTREDHIGKVSFPPVQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGGCGACACGAGACATCCTACGACCTTCACTCGCGAACCTCTGGTTCGGCTTCACTCTCTGTTTCTCGCGCGAACTACAATACAAGACACTCGCGAACCTCCGACT
TCACTCTCTGTTCTCTGTCTCTTCTCCCTCCGGTCATCTTCTCCCTCCGTCTGACAGTGTTCCTGCAAGTGCAGCAGCGGTTGGGTTGTCTTGTTTCTTTGGCAATCCAG
CTAATCTTCCCAGATTCCTGGAAAATTGGGGAGAAATTTTCCCAGCAATTTTCTCTCAAGCCAATCAGAACACTGCACCTAGGCTTGCTCGTGAGAATGCGAAAGATATC
ATTGCTTGTGGTTTTGATATTTCAAAAACCTTTATCTTCTCTGATTTTGATTACGTTGGAGGTGCTTTCTATAAAAACATGGATAAAGTTGCCAAATGTGTTACATACAA
TAAGGTTGTAGGTATTTTTGGGTTTACCCGTGAAGATCATATTGGAAAAGTTAGTTTTCCACCGGTGCAGATTATGATTGGCTATGAATGTCTGCTTGAGTTGTGGAAGT
GTGTGGATGTTGTGGTTGGGCAGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGGCGACACGAGACATCCTACGACCTTCACTCGCGAACCTCTGGTTCGGCTTCACTCTCTGTTTCTCGCGCGAACTACAATACAAGACACTCGCGAACCTCCGACT
TCACTCTCTGTTCTCTGTCTCTTCTCCCTCCGGTCATCTTCTCCCTCCGTCTGACAGTGTTCCTGCAAGTGCAGCAGCGGTTGGGTTGTCTTGTTTCTTTGGCAATCCAG
CTAATCTTCCCAGATTCCTGGAAAATTGGGGAGAAATTTTCCCAGCAATTTTCTCTCAAGCCAATCAGAACACTGCACCTAGGCTTGCTCGTGAGAATGCGAAAGATATC
ATTGCTTGTGGTTTTGATATTTCAAAAACCTTTATCTTCTCTGATTTTGATTACGTTGGAGGTGCTTTCTATAAAAACATGGATAAAGTTGCCAAATGTGTTACATACAA
TAAGGTTGTAGGTATTTTTGGGTTTACCCGTGAAGATCATATTGGAAAAGTTAGTTTTCCACCGGTGCAGATTATGATTGGCTATGAATGTCTGCTTGAGTTGTGGAAGT
GTGTGGATGTTGTGGTTGGGCAGTTTTGA
Protein sequenceShow/hide protein sequence
MPATRDILRPSLANLWFGFTLCFSRELQYKTLANLRLHSLFSVSSPSGHLLPPSDSVPASAAAVGLSCFFGNPANLPRFLENWGEIFPAIFSQANQNTAPRLARENAKDI
IACGFDISKTFIFSDFDYVGGAFYKNMDKVAKCVTYNKVVGIFGFTREDHIGKVSFPPVQIMIGYECLLELWKCVDVVVGQF